mRNA_S-firma_F_contig10580.790.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: A0A7S1CQR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQR3_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.180e-42 Identity = 80/183 (43.72%), Postives = 117/183 (63.93%), Query Frame = 1
Query: 1 DAFAKPYQGYCITLRYNDVEWDTDHRHREFKALHARLTEAGHGPYLPPFPSTGHK--PSMPP-----RLPGEFLDRRRVRLERYLQQLLSLPASGSSVDLLSWLGILSTSR---TDQKKSVLHLSKLQDYARPGDVLLFSCRGVLQGLQRTVTRSAWDHVGIVVLEPDTRTLHLLEVNGDGVG 519
D+F KPY YC+T+R++ +W R+ +FKALH +L PS + P +PP + EF++ RR +L+RYLQ LLS+P +SV L+SW+G+LST+R +D + +LH+++LQ++ +PGDVLLF+C VL GLQRTVTRS WDH+ IV + + L+E G+GVG
Sbjct: 45 DSFNKPYTAYCVTVRFDATQWSMWRRYNDFKALHDKLAAE---------PSVNRRALPRLPPPKHMVKRTAEFVEHRRQKLDRYLQGLLSVPEVAASVPLMSWMGVLSTARHERSDDARKLLHVTRLQEFVQPGDVLLFACNNVLSGLQRTVTRSEWDHIAIVCKQHGS-VFSLVEATGEGVG 217
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: A0A662YCV3_9STRA (Ribonuclease n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YCV3_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.230e-32 Identity = 114/359 (31.75%), Postives = 167/359 (46.52%), Query Frame = 1
Query: 1 DAFAKPYQGYCITLRYNDVEWDTDHRHREFKALHARLTEAGHGPYLPPFPSTGHKPSMPPRLPGEFLDRRRVRLERYLQQLLSLPASGSSVDLLSWLGILSTSRTDQ----KKSVLHLSKLQDYARPGDVLLFSCRGVLQGLQRTVTRSAWDHVGIVVLEPDTRTLHLLEVNGDGVGCHPLVWRVRCYGGEFTNCIAVRRLEYK---CVCEQLRVQSAKFRRQSRAMAPPAPSVTSPGSSPAARPRSVGSGTVTVTSPLFEAAXXXXXXXXXXXXXXXACTCGGSMDQDAVSDKLSEFVRTLVAAALQTAGVMRPC-EASSFWPGCFASGGAASDYLVAGVSFAQEVVVDTRELSVSSA 1053
D + Y Y I + +N W R +EF L+ RL G LP P K + P L G F+ RRR +LE YL+Q+L P GS V LLS+LG++STSR + +KSV+H++ L D R GD++LFSCR LQR T + +DHVGIVV L ++E +G+ + L R+ Y E +N I VRR+ + +QL+ + ++ A P+S SG + EA X + T S ++ + K F +L A+ + G + ++SSFWPG F GG +L +GV+ E+ +D R V A
Sbjct: 547 DLSQRSYTNYVIDVSFNGTAWQLARRFKEFYLLNCRLKTKYPGVELPRLPP---KQAFTP-LEGIFIQRRRAQLENYLKQVLVHPVLGSDVLLLSFLGVVSTSRDRELGQSEKSVIHVTTLHDSVRCGDIVLFSCRFGASRLQRKFTGAKYDHVGIVVPGESRVLLRIMEATSEGIQVYSLKARLMAYSREVSNAIVVRRINADRTPALLDQLKQFVQRVDGNPYSIFGILHYGGESDRQVIAEPKS-SSGATSAAEETDEAYCSSSSCTSXTPSHPASPTGETSNRGESQTTKRKYFCSSLAASTWKHLGWLETTRKSSSFWPGSFEDGGGVERFLASGVTLGPEIEIDCRIAEVGLA 900
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: A0A5D6Y1I1_9STRA (PX domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1I1_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.890e-30 Identity = 76/199 (38.19%), Postives = 110/199 (55.28%), Query Frame = 1
Query: 4 AFAKPYQGYCITLRYNDVEWDTDHRHREFKALHARLTEAGHGPYLPPFPSTGHKPSMPPRLPGEFLDRRRVRLERYLQQLLSLPASGSSVDLLSWLGILSTSRTDQKKSVLHLSKLQDYARPGDVLLFSCRGVLQGLQRTVTRSAWDHVGIVVLEPDTRTLHLLEVNGDGVGCHPLVW---RVRCYGGEFTNCIAVRRL 591
A +PY Y + +R+ ++ W R +F ALHARL +A LP P T + L +FL R++ L YL+ +L + + +SV LLS+LG L T Q++ VLHL L Y PGD++LF C G + G+QR++T S WDHVG+VV + +LLE G+GV PLV R+ Y +A+R+L
Sbjct: 228 AIERPYAVYTVEVRHGEMSWQVTRRFNDFAALHARLADAAPSAVLPELPRTKWLCA----LDDDFLLERQLELNDYLKSVLFVHSVNASVPLLSFLGAL----TLQRRDVLHLRVLNYYVAPGDLVLFRCCGPVSGIQRSMTGSEWDHVGVVVPGHSPTSFYLLEATGEGVSAFPLVSATSRLIAYSAFHVKYVALRKL 418
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: A0A833T210_PHYIN (PX domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T210_PHYIN) HSP 1 Score: 130 bits (328), Expect = 7.050e-30 Identity = 110/353 (31.16%), Postives = 160/353 (45.33%), Query Frame = 1
Query: 1 DAFAKPYQGYCITLRYNDVEWDTDHRHREFKALHARLTEAGHGPYLPPFPSTGHKPSMPPRLPGEFLDRRRVRLERYLQQLLSLPASGSSVDLLSWLGILSTSRTDQ----KKSVLHLSKLQDYARPGDVLLFSCRGVLQGLQRTVTRSAWDHVGIVVLEPDTRTLHLLEVNGDGVGCHPLVWRVRCYGGEFTNCIAVRRLEYKCVCEQLRVQSAKFRRQSRAMAPPAPSVTSPGSSPAARPRSVGSGTVTVTSPLFEAAXXXXXXXXXXXXXXXACTCGGSMDQDAVSDKLSEFVRTLVAAALQTAGVMRPC-EASSFWPGCFASGGAASDYLVAGVSFAQEVVVDTRELSV 1044
D + Y Y I + +N W R++EF ALH +L G LP P K P G F++ R+ +LE +L+QLL P + + V L+S+LG++STSR + KSV+H++ L D GD+++FSCR LQR T S +DHVGIVV L ++E +G+ + L R+ Y E +N I VR K E+ + R R + S+ S R++ + TS A + T DA + F +LVAAA + G + ++SSFWPG F GG L GV+ E V+D R + V
Sbjct: 319 DLSQRAYTCYVIDVVFNGTTWQLARRYKEFDALHNQLKRKYPGTTLPGLPP---KHVFTPT-EGVFINHRKGQLEAFLKQLLLHPIASTDVLLMSFLGVVSTSRDPELGHSAKSVIHVTSLHDSVAVGDIIMFSCRFGASRLQRKFTGSKYDHVGIVVPGESRFLLRIMEATSEGIQVYSLKQRLMAYAREVSNTIIVR----KIASERTPELTETLREFVRCVDGNPYSIFGILRSTGESDRNLFNSVRVSTS----ACEEGDDGLFNTGGSSTSXTPSSPEGTDATRSQRKYFCSSLVAAAWKEVGWLHTKRKSSSFWPGSFEDGGEVERLLAPGVTLGPETVIDCRIVEV 659
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: V9EZL5_PHYPR (PX domain-containing protein n=14 Tax=Phytophthora parasitica TaxID=4792 RepID=V9EZL5_PHYPR) HSP 1 Score: 120 bits (300), Expect = 8.010e-27 Identity = 103/354 (29.10%), Postives = 149/354 (42.09%), Query Frame = 1
Query: 16 PYQGYCITLRYNDVEWDTDHRHREFKALHARLTEAGHGPYLPPFPSTGHKPSMPPRLPGEFLDRRRVRLERYLQQLLSLPASGSSVDLLSWLGILSTSRTDQ------KKSVLHLSKLQDYARPGDVLLFSCRGVLQGLQRTVTRSAWDHVGIVVLEPDTRTLHLLEVNGDGVGCHPLVWRVRCYGGEFTNCIAVRRLEYKCVCEQLRVQSAKFRRQSRAMAPPAPSVTSPGSSPAARPRSVGSGTVTVTSPLFEAAXXXXXXXXXXXXXXXACTCGGSMDQDAVSDKLSEFVRTLVAAALQTAGVMRPC-EASSFWPGCFASGGAASDYLVA-GVSFAQEVVVDTRELSVSSA 1053
PY + + L + ++ W R EF LH RL LP P T + P FL +RR+ LE YL+ + + A SV LL +LG+LST+ D + +LHL L+ Y RPGD++LF+ R + LQR++TRS WDHV IVV + L LLE GDGV PL R+ Y +R+L + SRA V + L E G + S + F L+A A ++ G++ EA++FWPG F+ G L G S + E+++D + L V++A
Sbjct: 127 PYAVFKMKLSFENLRWRIARRFSEFVELHTRLKILVEESMLPRLPPTAWLSATEP----SFLFQRRLMLENYLKGMFMVGALQDSVPLLVFLGVLSTTYFDHVALRSYRSQILHLQVLEFYTRPGDLILFNGRAKVSVLQRSITRSEWDHVAIVVPPSEGEYLQLLEATGDGVTLTPLTARLLAYSAFHVRYFVLRKLRTPLL--------------SRA----------------------------VVNDLLERFTAEVEGLCYGLSFRKILYTG---QVEQRSQNSTYFCSELIAEAYKSLGIISSSSEANNFWPGSFSPGDFVDTELARHGASLSPEIIIDCKLLEVATA 431
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: A0A024GTB5_9STRA (PX domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTB5_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.060e-17 Identity = 108/383 (28.20%), Postives = 160/383 (41.78%), Query Frame = 1
Query: 19 YQGYCITLRYNDVEWDTDHRHREFKALHARLTEA-GHGPYLPPFPSTGHKP-----SMPP-----RLPGEFLDRRRVRLERYLQQLLSL---PASGSSVDLLSWLGILSTSR-TDQKKSVLHLS--KLQDYARPGDVLLFSCRGVLQGLQRTVTRSAWDHVGIVVLEPDTRTLHLLEVNGDGVGCHPLVWRVRCYGGEFTNCIAVRRLEYKCVCEQLR-----VQSAKFRRQSRAMAPPAPSVTSPGSSPAARPRSVGSGTVTVTSPLFEAAXXXXXXXXXXXXXXXACTCGGSMDQDAVSDKLSEFVRT--------------LVAAALQTAGVMRPCEASS-FWPGCFASGGAASDYLVAGVSFAQEVVVDTRELSVSSAI 1056
Y Y I + + + W R+++F LH L E G L S+ P + PP RL + + RRR LE YL++LL P+ V +LS+LG++ST + ++ VL S L GD++LFSCR QR VTRS +DHVGIV+ L LLE G+G+ +PL R+ Y E + IA+R K E + V SA+ + S +++ L ++ + S K+S+ VRT LVA+AL+ G +R + S FWPG F G L G++ +E+ VD R + V++AI
Sbjct: 399 YTLYQIRVTFGRMTWQVSRRYKDFDQLHYLLKEKYGEAFSLAFTDSSISSPVKATVNFPPKQIFGRLESDTIKRRRAMLENYLKRLLQAQKPPSLSQDVLVLSFLGVVSTPKLSNASVGVLSTSIDALDKQIGYGDIVLFSCRFGSSICQRKVTRSRFDHVGIVIPGLRGDNLRLLEATGEGIKVYPLKARLMAYAREVSERIAIRSFLVKRDSESAQRLMAFVASAEGKAYS---------------------------ILSIFQGLNKSDRYLQQKEVYDEEKRLPSFVSQNHTSTTQSVKMSKDVRTKETSSKRKNYFCSSLVASALKDMGWLRTQRSCSYFWPGSFEEDGEIEKSLHPGITLGKEIDVDCRLVEVATAI 754
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: W2Q2W6_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2Q2W6_PHYPN) HSP 1 Score: 83.2 bits (204), Expect = 1.220e-14 Identity = 74/264 (28.03%), Postives = 109/264 (41.29%), Query Frame = 1
Query: 286 WLGILSTSRTDQ------KKSVLHLSKLQDYARPGDVLLFSCRGVLQGLQRTVTRSAWDHVGIVVLEPDTRTLHLLEVNGDGVGCHPLVWRVRCYGGEFTNCIAVRRLEYKCVCEQLRVQSAKFRRQSRAMAPPAPSVTSPGSSPAARPRSVGSGTVTVTSPLFEAAXXXXXXXXXXXXXXXACTCGGSMDQDAVSDKLSEFVRTLVAAALQTAGVMRPC-EASSFWPGCFASGGAASDYLVA-GVSFAQEVVVDTRELSVSSA 1053
+LG+LST+ D + +LHL L+ Y RPGD++LF+ R + LQR++TRS WDHV IVV + L LLE GDGV PL R+ Y +R+L + SRA V + L E G + S + F L+A A ++ G++ EA++FWPG F+ G L G S + E+++D + L V++A
Sbjct: 40 FLGVLSTTYFDHVALRSYRSQILHLQVLEFYTRPGDLILFNGRAKVSVLQRSITRSEWDHVAIVVPPSEGEYLQLLEATGDGVTLTPLTARLLAYSAFHVRYFVLRKLRTPLL--------------SRA----------------------------VVNDLLERFTAEVEGLCYGLSFRKILYTG---QVEQRSQNSTYFCSELIAEAYKSLGIISSSSEANNFWPGSFSPGDFVDTELARHGASLSPEIIIDCKLLEVATA 258
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: A0A7S2C4N4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4N4_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.790e-13 Identity = 57/184 (30.98%), Postives = 85/184 (46.20%), Query Frame = 1
Query: 46 YNDVEWDTDHRHREFKALHARL-----TEAGHGPYLPPFPSTGHK-----PSMPPRLPG----------EFLDRRRVRLERYLQQLLSLPASGSSVDLLSWLGILSTSRT-------------------------DQKKSVLHLSKLQDYARPGDVLLFSCRGVLQGLQRTVTRSAWDHVGIVV 462
+ +EW R+ EF LH +L ++AG GP G + P PRLPG + ++ RRV L YL+ +L P + SS+ +LS+LG++STSR D + V+H+ +L Y GD++LF + G+QR VT + WDHV +VV
Sbjct: 51 FKALEWQVWRRYNEFVELHRKLCAQHQSQAGGGPSPSGTNIAGTQGRFVDPEKLPRLPGKAIFGRSFNEDVVEARRVALAAYLKAVLDDPHALSSIHVLSFLGLMSTSREPETVHTKNNGLHNHSSSTNNKEEVDDALRPVIHIGQLDSYLEWGDLVLFKSDNAVSGIQRAVTSAEWDHVALVV 234
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: A0A7S4D7C4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7C4_HETAK) HSP 1 Score: 70.1 bits (170), Expect = 8.630e-10 Identity = 74/274 (27.01%), Postives = 105/274 (38.32%), Query Frame = 1
Query: 370 GDVLLFSCRGVLQGLQRTVTRSAWDHVGIVVLEPDTRTLHLLEVNGDGVGCHPLVWRVRCYGGEFTNCIAVRRLEYK---CVCEQLRVQSAKF--------------RRQSRAM--------------APPAPSVTSPGSSPAARPRSVG--------------SGTVTVTSPLFEAAXXXXXXXXXXXXXXXACTCGGSMDQDAVSDKLSEFVRTLVAAALQTAGVMRPCEA-SSFWPGCFASGGAASDYLVAGVSFAQEVVVDTRELSVSSA 1053
GD++LF C +QR +T + WDHV ++V + L L+E G+GV P+ R+R YG +FT +A+R+L+ + E++ AK R Q A A + G + AR + G SGT A S + S F LVAA LQ GV+RP SFWPG FASGG + G SF E+++D L + +A
Sbjct: 8 GDLVLFKCNTGAARVQRRLTGAEWDHVAVIVQDTKGGALLLMEATGEGVRSWPVCQRLRAYGSDFTQYMALRKLQCNKTMSMYEKMLEFVAKAVGRPYGFGLGRLLNRNQEEASQXXXXXXXXXXQERAKQDIDNSRKGQNGDAREQEQGXXXXXXXXXXXXXNSGTA--------AGAEDQAGAQQGGRGGSVSPAPSSQGSRLEGEGESYFCSELVAACLQHMGVVRPGRGCGSFWPGAFASGGDLDKECMPGTSFGDEIIIDCHSLEIGNA 273
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Match: H3HC99_PHYRM (Uncharacterized protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3HC99_PHYRM) HSP 1 Score: 65.9 bits (159), Expect = 5.780e-8 Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 1
Query: 370 GDVLLFSCRGVLQGLQRTVTRSAWDHVGIVVLEPDTRTLHLLEVNGDGVGCHPLVWRVRCYGGEFTNCIAVRRL 591
GD++LF+ R + G+QR++TRS WDHV IVV D L LLE GDGV PL R+ Y +R+L
Sbjct: 21 GDLILFNSRAKVSGIQRSMTRSEWDHVAIVVPSRDNSNLQLLEATGDGVTLTPLTARLLAYSTFHVRYFVLRKL 94 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10580.790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10580.790.1 >prot_S-firma_F_contig10580.790.1 ID=prot_S-firma_F_contig10580.790.1|Name=mRNA_S-firma_F_contig10580.790.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=357bp DAFAKPYQGYCITLRYNDVEWDTDHRHREFKALHARLTEAGHGPYLPPFPback to top mRNA from alignment at S-firma_F_contig10580:497..1822- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10580.790.1 ID=mRNA_S-firma_F_contig10580.790.1|Name=mRNA_S-firma_F_contig10580.790.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1326bp|location=Sequence derived from alignment at S-firma_F_contig10580:497..1822- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10580:497..1822- >mRNA_S-firma_F_contig10580.790.1 ID=mRNA_S-firma_F_contig10580.790.1|Name=mRNA_S-firma_F_contig10580.790.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2142bp|location=Sequence derived from alignment at S-firma_F_contig10580:497..1822- (Sphaerotrichia firma ET2_F female)back to top |