mRNA_S-firma_F_contig10018.79.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10018.79.1
Unique NamemRNA_S-firma_F_contig10018.79.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: A0A6H5KB05_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 7.550e-99
Identity = 177/241 (73.44%), Postives = 188/241 (78.01%), Query Frame = 2
Query:   35 VPLPVPGVCAMSANAFGKLFAACPEPEFSLPGVRELPALSFPLGLLLR----------SLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDISPDALEE-----------LIIVDCDLGTVDGPEMEQLPPPVRRSLTKAVRAVLHGNLGNLDAPVRLSKPELSAAXXXXXXXXXXXXXXXNTSSSRRAGKGGAL 694
            VPLPVPGVC MS  AFG+ F+ACPEPEF+LPG+RELPALSFPLGLLLR          SLRPKGVL+LFAA+LQEGRILLHS KPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDI+PDAL E           LIIVDCDLG VDG  MEQLPPPVRRSLTKAVRAVLHGNLG LDAP RLSKPE +A                ++SSS  A K G+L
Sbjct:  575 VPLPVPGVCTMSIKAFGERFSACPEPEFALPGIRELPALSFPLGLLLRQGGSVFEDLASLRPKGVLELFAAVLQEGRILLHSAKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDIAPDALGEVTHHMMLXXXXLIIVDCDLGIVDGQGMEQLPPPVRRSLTKAVRAVLHGNLGGLDAPARLSKPEAAAGAKATGSKVAKGRAPPSSSSS--AQKSGSL 813          
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: D8LB83_ECTSI (WD-40 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 6.750e-78
Identity = 133/146 (91.10%), Postives = 139/146 (95.21%), Query Frame = 2
Query:  170 LLRSLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDISPDALEELIIVDCDLGTVDGPEMEQLPPPVRRSLTKAVRAVLHGNLGNLDAPVRLSKPELSAA 607
            ++RSLRPKGVL+LFAAILQEGRILLHS KPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDI+PDALEELIIVDCDLG VDG  MEQLPPPVRRSLTKAVRAVLHGNLG LDAP RLSKPE ++A
Sbjct:  603 MVRSLRPKGVLELFAAILQEGRILLHSAKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDIAPDALEELIIVDCDLGIVDGQGMEQLPPPVRRSLTKAVRAVLHGNLGGLDAPARLSKPEAASA 748          
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: A0A4D9DBD8_9STRA (UDENN domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBD8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 4.380e-30
Identity = 79/204 (38.73%), Postives = 115/204 (56.37%), Query Frame = 2
Query:    2 LDAAVFQLTLEVPLPVPGVCAMSANAFGKLFAACPEPEFSLPGVRELPALSFPLGLLLRSLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDISPDALEELIIVDCDLGTVDGPEME----QLPPPVRRSLTKAVRAVLHGNLGNLD-APVRLSKPEL 598
            L   + QLTLEVPLP+PG   +  +  G+           L G   LP+L +PL   LR+   + VL L AA L E ++LLHS   ++L  +AE + +L+YPLQW + Y+  LP  L+  VE+P  +ILGVHT+WL+D+  D+L++++ VDCD G V  P         PP V   L + +R  ++  L  LD A  R+S  +L
Sbjct:  538 LRTHIVQLTLEVPLPIPGALGVQFDFLGRPITC------RLAGPGALPSLCYPLSPFLRTFSARNVLALVAAALTESKVLLHSHDLSVLPVMAESLLSLIYPLQWQHPYLVPLPRELLVVVETPTNYILGVHTEWLADVPRDSLKDVVCVDCDSGAVRLPPRPFNPPSFPPSVLYPLLRRLRGTVYPMLTRLDSASSRVSLDDL 735          
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: A0A7S2RME7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RME7_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.090e-21
Identity = 58/145 (40.00%), Postives = 86/145 (59.31%), Query Frame = 2
Query:   38 PLPVPGVCAMSANAFGKLFAACPEPEFSLPGVRELPALSFPLGLLLRSLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDISPDALEELIIVDCDLGTV 472
            PLPV     ++ +AF +    C     S+     +PA +F L   L+ L     ++L +  L E ++L HS   A LA V E V  LMYPLQW + YVPVLP  ++E +ESPQPFI+G+H+DWL ++ P+ LE++++ D D G +
Sbjct:  234 PLPVTDRMMVTFHAFERQEIQC-----SVCAPYGMPASTFGLPEPLKCLGSDVGVELLSYALGERKLLFHSADSAALAPVTEAVCTLMYPLQWIHTYVPVLPRSMLEVLESPQPFIIGIHSDWLPEVRPEVLEDILVFDVDRGVL 373          
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: A0A151Z4L2_9MYCE (WD40 repeat-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z4L2_9MYCE)

HSP 1 Score: 100 bits (250), Expect = 1.590e-20
Identity = 61/197 (30.96%), Postives = 107/197 (54.31%), Query Frame = 2
Query:    2 LDAAVFQLTLEVPLPVPGVCAMSANAFGKLFAACPEPEFSLPGVRELPALSFPLGLLLRSLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDISPDA--LEELIIVDCDLGTVDGPEME----QLPPPVRRSLTKAVRAVLHGNLGNLDAP 574
            ++  +  L  E+PLP P +  ++    G+   A   P   +     LP    P  +L + L  K +L L  +++ E ++++ S++ +LL  + E +++L+YPLQ+P+ YVP+LP  L+E++ SP PFI+GVH  +  +I  +   L E+++VD D  TV  P  +    QLP    + L   +R V+H  + + D P
Sbjct:  627 IERYIHHLVQELPLPQPSMNTITYTLGGQNLIALKRPSECM-----LPMSDLPFSILFKCLDIKNLLALVKSVILEEKVIIISSQYSLLTCITEILYSLIYPLQYPHVYVPILPELLLEYIYSPFPFIMGVHRSYAQNILSEESLLSEIVLVDLDNNTVHLPPTQSKDVQLPEKEVQQLINQLRKVVHYEILSSDLP 818          
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: A0A8J4PTI3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PTI3_9MYCE)

HSP 1 Score: 100 bits (249), Expect = 2.160e-20
Identity = 66/197 (33.50%), Postives = 104/197 (52.79%), Query Frame = 2
Query:    2 LDAAVFQLTLEVPLPVPGVCAMSANAFGKLFAACPEPEFSLPGVRELPALSFPLGLLLRSLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDI--SPDALEELIIVDCDLGTVDGPEME----QLPPPVRRSLTKAVRAVLHGNLGNLDAP 574
            ++  ++ L  E+PLP PG   +S N  G+       P   L     LP       +L + L  + VL +   IL E +I++ S++ +LL  ++E + +L+YPLQ+P+ YVP+LP  L+E+V SP PFI+GVH  + S I    + L E+++VD D  TV  P  +    QLP      L   +R V+   + + D P
Sbjct:  685 IERYIYNLVQEIPLPQPGANIVSFNLGGQTQIPLKRPSDCL-----LPTPDLSFNILFKCLDIRNVLLVLKCILLEEKIIIISSQYSLLTYISEIISSLLYPLQFPHVYVPILPELLLEYVYSPFPFIMGVHKSYSSTILNEENLLSEIVVVDLDNNTVHIPPTDTKDIQLPERETAQLINQLRRVVQFEILSADLP 876          
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: A0A7S3RYV7_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RYV7_EMIHU)

HSP 1 Score: 95.5 bits (236), Expect = 7.750e-20
Identity = 60/173 (34.68%), Postives = 94/173 (54.34%), Query Frame = 2
Query:    2 LDAAVFQLTLEVPLPVPGVCAMSANAFGKLFAACPEPEFSLPGV-RELPALSFPLGLLLRSLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSD----ISPDALEELIIVDCDLGTVDGPEM-EQLPP 502
            ++A V  L  E P+P PG  ++     G+      +  F  P + RELP    PLG LL +L P+ VL LF   L E R+L  ++  + L A AE + +L++PL+W   Y+P+LP  L+E ++SP PF++G+H    +     + P    +  + + D GT+  P + EQLPP
Sbjct:   51 VEALVSSLLWEAPMPAPGHISVQLGLGGE------QMTFERPDLSRELPEPPLPLGALLHALEPRQVLSLFRGALFEHRVLFVASNLSQLTAAAEALLSLLWPLRWQGIYIPLLPGLLVEVLQSPVPFVIGIHASTFASACRALPPVLPPDAFVANLDEGTLLVPPLDEQLPP 217          
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: R1DGT0_EMIHU (UDENN domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DGT0_EMIHU)

HSP 1 Score: 95.5 bits (236), Expect = 1.030e-18
Identity = 60/173 (34.68%), Postives = 94/173 (54.34%), Query Frame = 2
Query:    2 LDAAVFQLTLEVPLPVPGVCAMSANAFGKLFAACPEPEFSLPGV-RELPALSFPLGLLLRSLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSD----ISPDALEELIIVDCDLGTVDGPEM-EQLPP 502
            ++A V  L  E P+P PG  ++     G+      +  F  P + RELP    PLG LL +L P+ VL LF   L E R+L  ++  + L A AE + +L++PL+W   Y+P+LP  L+E ++SP PF++G+H    +     + P    +  + + D GT+  P + EQLPP
Sbjct:  323 VEALVSSLLWEAPMPAPGHISVQLGLGGE------QMTFERPDLSRELPEPPLPLGALLHALEPRQVLSLFRGALFEHRVLFVASNLSQLTAAAEALLSLLWPLRWQGIYIPLLPGLLVEVLQSPVPFVIGIHASTFASACRALPPVLPPDAFVANLDEGTLLVPPLDEQLPP 489          
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: R1DQA3_EMIHU (UDENN domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DQA3_EMIHU)

HSP 1 Score: 95.5 bits (236), Expect = 1.050e-18
Identity = 60/173 (34.68%), Postives = 94/173 (54.34%), Query Frame = 2
Query:    2 LDAAVFQLTLEVPLPVPGVCAMSANAFGKLFAACPEPEFSLPGV-RELPALSFPLGLLLRSLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSD----ISPDALEELIIVDCDLGTVDGPEM-EQLPP 502
            ++A V  L  E P+P PG  ++     G+      +  F  P + RELP    PLG LL +L P+ VL LF   L E R+L  ++  + L A AE + +L++PL+W   Y+P+LP  L+E ++SP PF++G+H    +     + P    +  + + D GT+  P + EQLPP
Sbjct:  262 VEALVSSLLWEAPMPAPGHISVQLGLGGE------QMTFERPDLSRELPEPPLPLGALLHALEPRQVLSLFRGALFEHRVLFVASNLSQLTAAAEALLSLLWPLRWQGIYIPLLPGLLVEVLQSPVPFVIGIHASTFASACRALPPVLPPDAFVANLDEGTLLVPPLDEQLPP 428          
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Match: A0A8B9R8E2_ASTMX (SET binding factor 2 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9R8E2_ASTMX)

HSP 1 Score: 95.1 bits (235), Expect = 1.500e-18
Identity = 57/142 (40.14%), Postives = 86/142 (60.56%), Query Frame = 2
Query:  140 LPALSFPLGLLLRSLRPKGVLQLFAAILQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDISPDALEELIIVDCDLGTVDGPE---MEQLPPPVRRSLTKAVRAVLHGNL 556
            LP  +  + LL + L  + VL LF A+L E ++L HST    L      + ALM+PL++ Y Y+P+LP+ L+E + SP PFI+GVH+ + S+I    L ++II D D GT+  PE   + QLP P+ ++   A+  VLH +L
Sbjct:  107 LPVTTKSVALLFQQLGIQNVLSLFCAVLTEHKVLFHSTSYQRLEEACRALEALMFPLKYSYPYIPILPSRLLEMLNSPTPFIMGVHSMFQSEIHE--LLDVIIADLDGGTIKIPECIHLSQLPEPLLQNTQNALSVVLHPDL 246          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10018.79.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KB05_9PHAE7.550e-9973.44UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LB83_ECTSI6.750e-7891.10WD-40 repeat protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A4D9DBD8_9STRA4.380e-3038.73UDENN domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S2RME7_9STRA3.090e-2140.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A151Z4L2_9MYCE1.590e-2030.96WD40 repeat-containing protein n=1 Tax=Tieghemoste... [more]
A0A8J4PTI3_9MYCE2.160e-2033.50Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A7S3RYV7_EMIHU7.750e-2034.68Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
R1DGT0_EMIHU1.030e-1834.68UDENN domain-containing protein n=1 Tax=Emiliania ... [more]
R1DQA3_EMIHU1.050e-1834.68UDENN domain-containing protein n=1 Tax=Emiliania ... [more]
A0A8B9R8E2_ASTMX1.500e-1840.14SET binding factor 2 n=1 Tax=Astyanax mexicanus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10018contigS-firma_F_contig10018:324..3572 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size753
Cds size753
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10018.79.1prot_S-firma_F_contig10018.79.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10018 324..3572 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815525.520799-CDS-S-firma_F_contig10018:323..6371622815525.520799-CDS-S-firma_F_contig10018:323..637Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 324..637 -
1696949388.1477993-CDS-S-firma_F_contig10018:323..6371696949388.1477993-CDS-S-firma_F_contig10018:323..637Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 324..637 -
1622815525.5351856-CDS-S-firma_F_contig10018:1100..11941622815525.5351856-CDS-S-firma_F_contig10018:1100..1194Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 1101..1194 -
1696949388.1663215-CDS-S-firma_F_contig10018:1100..11941696949388.1663215-CDS-S-firma_F_contig10018:1100..1194Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 1101..1194 -
1622815525.5481718-CDS-S-firma_F_contig10018:2048..22161622815525.5481718-CDS-S-firma_F_contig10018:2048..2216Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 2049..2216 -
1696949388.1798556-CDS-S-firma_F_contig10018:2048..22161696949388.1798556-CDS-S-firma_F_contig10018:2048..2216Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 2049..2216 -
1622815525.5683718-CDS-S-firma_F_contig10018:2528..26711622815525.5683718-CDS-S-firma_F_contig10018:2528..2671Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 2529..2671 -
1696949388.189964-CDS-S-firma_F_contig10018:2528..26711696949388.189964-CDS-S-firma_F_contig10018:2528..2671Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 2529..2671 -
1622815525.582883-CDS-S-firma_F_contig10018:3538..35721622815525.582883-CDS-S-firma_F_contig10018:3538..3572Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 3539..3572 -
1696949388.2067688-CDS-S-firma_F_contig10018:3538..35721696949388.2067688-CDS-S-firma_F_contig10018:3538..3572Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10018 3539..3572 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10018.79.1

>prot_S-firma_F_contig10018.79.1 ID=prot_S-firma_F_contig10018.79.1|Name=mRNA_S-firma_F_contig10018.79.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=251bp
ARRGRVPADPRGPAAGAGRVRDVRQRLREAVRGVSGARVLPAGGSGAAGA
VVPSRPAAQVSSPQGRSPAVRGDSAGGAHPPALHQARAAGGRGGRGVCAH
VPSAVALRLRARSPELSDRARGIPAALHPRRSHRLVVGHLPGRLGGVDHR
RLRPRHRGRPGDGAAPASRAPLPHQGRPGGAAREPRQPRRPRAAIEARAV
SRSRGSSSSRGGSASEREHVVVEKSRQGRCVAVLPTAGNTGRQQRPRQDG
R
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mRNA from alignment at S-firma_F_contig10018:324..3572-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10018.79.1 ID=mRNA_S-firma_F_contig10018.79.1|Name=mRNA_S-firma_F_contig10018.79.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3249bp|location=Sequence derived from alignment at S-firma_F_contig10018:324..3572- (Sphaerotrichia firma ET2_F female)
GCTCGACGCGGCCGTGTTCCAGCTGACCCTCGAGGTAAATGTTTGTAGGT ATCATGGTCGATGGCGGTTGGCAGCAAGCGTGCTCCTTCTCAGCTGTTGC CGTTGTTTCTCTCTCCTGCGTCGTGTGTTGTTTGTTGGCCTGGCTGTGTG GTTTTTTGGTGGATTCAAGGGGGCGCTCGCCTGTTGCTTTTTTCTCATGC GTGGCGGCTTCTCTGGCTGTGTTTCCTAGCTCGCGACCACAGGCTGTGTT GTGTTTCTTCGGTGGGCCTTTTGAGTTCATGGCCCGATCGTAGCGTGTTC AGCATCAGCCACAACAAGCAGCAGCAGCAGGAGCACGCTGTTTCGCGGTG TAGAGGTGTGGGGTTTGCACCCGTCAAGAGATACGGCCGCTCTTCGCGGA ATACGTATCCTTCGAAGTAGACATCGGCCCAGGTTTGCCCTCGAGACTAG TTGGTCGAAAACCCACCGCGCAGGGCTTGTTGTAGACTACAATAGCCTCC CAACATACCAGTCTACCAGGCGATGCGCCCTTGCAACTTGCAAGACCACC AAATCCCCGGCGAGTCGACCTTGACGAGCCGCAAGCCACCCCATCAAGAA CCGCTCAAACGGCAACACCAAAGCAGTCTATGATAACAGCGCTTCTTTTC TCGCGACGTCGCCCCCCCCCCCCCCCCCGCGCGATCGCTTCACTCCGGCC TTGGCCGCCCCAGCCCGCCACCACCCACCGGATATGATGATATGGGTATT GTAAACACGTATTTGATGGTATTTGGTGGTATTTGATGGTATTTGATGGT ATTTGATGGTATTTGGTGACATTTGATGGTATTTGGTGGTATTTGATGGT ATTTGGTGGTATTTGATGGGACACACGGGCCCCCCGCGTCTGCCCCCGCA GGTCCCGCTGCCGGTGCCGGGCGTGTGCGCGATGTCCGCCAACGCCTTCG GGAAGCTGTTCGCGGCGTGTCCGGAGCCCGAGTTCTCCCTGCCGGGGGTT CGGGAGCTGCCGGCGCTGTCGTTCCCTCTCGGCCTGCTGCTCAGGTAGAG GGGGGAGTGGGTGGCGAGGGCGCTGGATGTTTGTTGCAAGAGGTGCAACG GTGGTGGTGGTGGTGATGGGGGTGGTGTCGAGTCGAGACTCCTCTTGGTT TTGTGGTTCGGCGGTGGGTCGGTGGAGTTTGCGGGCGATGGGCGGCGGTA AGCTGTGGATGCGTGGCCGGCAGCATACGGCACCTTTTGAGAAGTGGCAC GAACAATCGGTTCCCCCGTGAATGAAGCTTTGGCTTGTGCGTGTTGTCTG TCTGTCTGTCTGCCTGCCTGCCTGTCTGTCTGTCTGTCTGTCCGTCCGTC GCGCAGGTCTCTTCGCCCCAAGGGCGTTCTCCAGCTGTTCGCGGCGATTC TGCAGGAGGGGCGCATCCTCCTGCACTCCACCAAGCCCGCGCTGCTGGCG GCCGTGGCGGAAGGGGTGTTTGCGCTCATGTACCCTCTGCAGTGGCCCTA CGCCTACGTGCCCGTTCTCCCGAAGTGAGCTTCTTCCCGCGTTTTCGTTT TTGGGTTCTGCTTGATGGCTGCCCCCCGGTGTGCTGGCTTGTGCGCTGAC TTTTGTGCCCTGGTGGTCTCGCCGCCGCGTCAGCAGTTCTTCCGTGCAGC CGGTCGTCGTTGCTGCTGCTCGTTGTGTCGTTTCCGGGTACAGTACCTTC GGTGTTGGCGCGTTACATGCACGACGCGCTTGAATTCTCGCCAAGCGGGT TTATTAATAAATTTTCCACATACATTCGTCAGCCGTATACGTCCGTCCTG TGAAGAAGTCGTTCCAGGGGGACTGGTTTATTGGTACGGAATAGTTTGTG GCGGGGTTTCGACTCTGAGCATGTACCTTGTACCTTTTTCGGGCCCAGCG TGAAGGAGCGGCTCAGCGTGGCTTAGCTTGCGGTACTGTGCGACTACTGC TGTGGTACGACTTCATGGCGTTCGTTCATTGTCCCGCCCCCCCCCCGCCC CCCCTGAAAAGGTCTTCGTAGGCAAAATAGAGCGAAGTTGGTCTTGTAAG ATTGACAGGTTTAAGGATGCTCGCTCGCACGCGCGCGATGTTACTGTTTC TATCAATAGGAGATGGAATGTTACTGTTTCTATAACAGCAGTAGATGGAG CAGGACCAAGGACCAGTGGTGCTACGCGTAGTGCCGCCTGAGGCTCGAGG TCAATGGCGCAGAGGCTACACGCATGAGCTAGACAAAAAAAAACGAGGTA CAGCAGTAGTGTCGCAAAAAGAGGCAAGTACGGCATCCCCCCACCGCCCT CTAACGCCCCTCGCCTCCCTCTGTCCTCTGCCCTCTGACGGCCTCTCTCT CGCCCAACCACTTCCACGCCCCGCTCAGCTGTCTGATCGAGCACGTGGAA TCCCCGCAGCCCTTCATCCTCGGCGTTCACACCGACTGGTTGTCGGACAT CTCCCCGGACGCCTTGGAGGAGGTGATAGATTCGGTCTTGTGTGTGGAGG TCGAGATGACACTTTTCGAGTCTTTGGTCGCCTCGACCTTTAATTCTGCA TGGTTGTTGTCGTGGCTGAAGTTGTCTTGTGCTGCTGCTGCTGCTGCTGT CGTTGTCGTTGATGAGCTGAGCTTGTTGTAACGGTGTTGTGTGTTGCGGG TGTTGCGGCCATCTTACGGCCTTCACCGAGAAGCACGCTCAGTGAAAGAA AGTGCGCTCTATTGAAGGCATGGCATGATATGCCGTGATACCATTTGGGT TTGTTTCGTGTTTTCTCGCGCCGGTGTCGAAAACGCAAGCACCCTCTGCC TGCTTCATTTCACGTTGAAAGCCTCAAGTCCTCTCACCTCCTCAACACTT TCAAAGGTACATACATACGTATGCACCAAAGCTGCGAACGCTCTTGGCCT TTCTCCACGACTGTCCCTGCCCTATCCCGTCGCAGTTGATCATCGTCGAC TGCGACCTCGGCACCGTGGACGGCCCGGAGATGGAGCAGCTCCCGCCTCC CGTGCGCCGCTCCCTCACCAAGGCCGTCCGGGCGGTGCTGCACGGGAACC TCGGCAACCTCGACGCCCCCGTGCGGCTATCGAAGCCCGAGCTGTCAGCC GCAGCCGCGGCAGCAGCAGCAGCCGCGGCGGCAGCGCAAGCGAGAGGGAA CACGTCGTCGTCGAGAAGAGCAGGCAAGGGCGGTGCGTTGCCGTTCTCCC AACAGCCGGGAACACCGGCCGGCAGCAACGGCCTCGGCAGGACGGTCGC
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Coding sequence (CDS) from alignment at S-firma_F_contig10018:324..3572-

>mRNA_S-firma_F_contig10018.79.1 ID=mRNA_S-firma_F_contig10018.79.1|Name=mRNA_S-firma_F_contig10018.79.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1506bp|location=Sequence derived from alignment at S-firma_F_contig10018:324..3572- (Sphaerotrichia firma ET2_F female)
GCTCGACGCGGCCGTGTTCCAGCTGACCCTCGAGGCTCGACGCGGCCGTG
TTCCAGCTGACCCTCGAGGTCCCGCTGCCGGTGCCGGGCGTGTGCGCGAT
GTCCGCCAACGCCTTCGGGAAGCTGTTCGCGGCGTGTCCGGAGCCCGAGT
TCTCCCTGCCGGGGGTTCGGGAGCTGCCGGCGCTGTCGTTCCCTCTCGGC
CTGCTGCTCAGGTCCCGCTGCCGGTGCCGGGCGTGTGCGCGATGTCCGCC
AACGCCTTCGGGAAGCTGTTCGCGGCGTGTCCGGAGCCCGAGTTCTCCCT
GCCGGGGGTTCGGGAGCTGCCGGCGCTGTCGTTCCCTCTCGGCCTGCTGC
TCAGGTCTCTTCGCCCCAAGGGCGTTCTCCAGCTGTTCGCGGCGATTCTG
CAGGAGGGGCGCATCCTCCTGCACTCCACCAAGCCCGCGCTGCTGGCGGC
CGTGGCGGAAGGGGTGTTTGCGCTCATGTACCCTCTGCAGTGGCCCTACG
CCTACGTGCCCGTTCTCCCGAAGTCTCTTCGCCCCAAGGGCGTTCTCCAG
CTGTTCGCGGCGATTCTGCAGGAGGGGCGCATCCTCCTGCACTCCACCAA
GCCCGCGCTGCTGGCGGCCGTGGCGGAAGGGGTGTTTGCGCTCATGTACC
CTCTGCAGTGGCCCTACGCCTACGTGCCCGTTCTCCCGAACTGTCTGATC
GAGCACGTGGAATCCCCGCAGCCCTTCATCCTCGGCGTTCACACCGACTG
GTTGTCGGACATCTCCCCGGACGCCTTGGAGGAGCTGTCTGATCGAGCAC
GTGGAATCCCCGCAGCCCTTCATCCTCGGCGTTCACACCGACTGGTTGTC
GGACATCTCCCCGGACGCCTTGGAGGAGTTGATCATCGTCGACTGCGACC
TCGGCACCGTGGACGGCCCGGAGATGGAGCAGCTCCCGCCTCCCGTGCGC
CGCTCCCTCACCAAGGCCGTCCGGGCGGTGCTGCACGGGAACCTCGGCAA
CCTCGACGCCCCCGTGCGGCTATCGAAGCCCGAGCTGTCAGCCGCAGCCG
CGGCAGCAGCAGCAGCCGCGGCGGCAGCGCAAGCGAGAGGGAACACGTCG
TCGTCGAGAAGAGCAGGCAAGGGCGGTGCGTTGCCGTTCTCCCAACAGCC
GGGAACACCGGCCGGCAGCAACGGCCTCGGCAGGACGGTCGCTTGATCAT
CGTCGACTGCGACCTCGGCACCGTGGACGGCCCGGAGATGGAGCAGCTCC
CGCCTCCCGTGCGCCGCTCCCTCACCAAGGCCGTCCGGGCGGTGCTGCAC
GGGAACCTCGGCAACCTCGACGCCCCCGTGCGGCTATCGAAGCCCGAGCT
GTCAGCCGCAGCCGCGGCAGCAGCAGCAGCCGCGGCGGCAGCGCAAGCGA
GAGGGAACACGTCGTCGTCGAGAAGAGCAGGCAAGGGCGGTGCGTTGCCG
TTCTCCCAACAGCCGGGAACACCGGCCGGCAGCAACGGCCTCGGCAGGAC
GGTCGC
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