mRNA_S-firma_F_contig10015.75.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10015.75.1
Unique NamemRNA_S-firma_F_contig10015.75.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A087HKM7_ARAAL (HELICc2 domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HKM7_ARAAL)

HSP 1 Score: 274 bits (701), Expect = 4.150e-90
Identity = 132/211 (62.56%), Postives = 163/211 (77.25%), Query Frame = 1 
Query:    1 LLIKMCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKPDPGLGT 633
            LL++M   VPDG+V FF SYSYM  I+  WS++GIL +I ++KL+FIET+D+VETTLAL N++ AC RGRGA+F SVARGKVAEGIDF  H+GR+V+++G+PFQYTL+  L ARL YLRD F I+E DFLTFDALRQAAQC+GRVIRSK+DYGMM+ AD RY + DK SKLP WI  HL    L+ S   A  +AR+F R MA+P    GT
Sbjct:   31 LLVEMVSIVPDGVVCFFVSYSYMDGIIATWSETGILKEIMQQKLVFIETQDVVETTLALDNYRRACDRGRGAVFFSVARGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGT 241
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A7S0FJQ4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FJQ4_9STRA)

HSP 1 Score: 271 bits (694), Expect = 9.240e-89
Identity = 127/205 (61.95%), Postives = 162/205 (79.02%), Query Frame = 1 
Query:    1 LLIKMCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKP 615
            +L++MC ++PDG+VAFF SYSYM  I+++W   GIL Q+ + KL+FIETKD+VETTLAL N++ AC  GRGA+FLSVARGKV+EGI+F  H+GR VI+FG+PFQYTL+H LRARL YL+  + I+E DFL FDALRQA+QC+GRVIRSK+DYG+M+LADSRY + DK SKLP+WI Q L    L+ S   A Q  R F R M++P
Sbjct:   41 MLVEMCSSIPDGVVAFFTSYSYMENIISEWDGMGILRQLTKHKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHVLRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKTDYGLMVLADSRYNRHDKRSKLPKWILQFLSDQYLNLSTDMALQHVRHFLRQMSQP 245
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A087GZK3_ARAAL (HELICc2 domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087GZK3_ARAAL)

HSP 1 Score: 273 bits (697), Expect = 3.490e-88
Identity = 134/211 (63.51%), Postives = 165/211 (78.20%), Query Frame = 1 
Query:    1 LLIKMCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKPDPGLGT 633
            LL++M   VPDG+V FF SYSYM  I+  WS++GIL +I ++KL+FIET+D+VETTLAL N++ AC RGRGA+F SVARGKVAEGIDF  H+GR+V+++G+PFQYTL+  L ARL YLRD F I+E DFLTFDALRQAAQC+GRVIRSK+DYGMM+ AD RY + DK SKLP WI  HL  D LST +  A  +AR+F R MA+P    GT
Sbjct:  129 LLVEMVSIVPDGVVCFFVSYSYMDGIIATWSETGILKEIMQQKLVFIETQDVVETTLALDNYRRACDRGRGAVFFSVARGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR-DNLSTDM--AIHIAREFLRKMAQPYDKAGT 336
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A2U1MI62_ARTAN (RAD3-like DNA-binding helicase protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MI62_ARTAN)

HSP 1 Score: 268 bits (686), Expect = 7.130e-88
Identity = 131/205 (63.90%), Postives = 159/205 (77.56%), Query Frame = 1 
Query:    1 LLIKMCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKP 615
            LL++M   VPDGIV FF SYSY   IV  W+++GIL +I +RKL+FIET+D+VETTLAL N++ AC  GRGA+F SVARGKVAEGIDF  H+GR+VI+FG+PFQYTL+  L ARL YLR+ F I+E DFLTFDALRQAAQC+GRVIRSK+DYGMM+ AD RY + DK SKLP WI  HL    L+ S   A  +AR+F R MA+P
Sbjct:   31 LLLEMVSVVPDGIVCFFVSYSYTDAIVNSWNETGILKEIMQRKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYTRHDKRSKLPGWILSHLREAHLNLSTDMAVHIAREFLRKMAQP 235
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A7C9E1G5_OPUST (HELICc2 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9E1G5_OPUST)

HSP 1 Score: 270 bits (690), Expect = 6.130e-87
Identity = 132/205 (64.39%), Postives = 158/205 (77.07%), Query Frame = 1 
Query:    1 LLIKMCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKP 615
            LL++M   VPDGIV FF SYSYM  IV  W+++GIL  I + KL+FIET+D+VETTLAL N++ AC  GRGA+F SVARGKVAEGIDF  H+GR+VI+FG+PFQYTL+  L ARL YLRD F I+E DFLTFDALRQAAQC+GRVIRSK+DYGMM+ AD RY + DK SKLP WI  HL    L+ S   A  +AR+F R MA+P
Sbjct:  141 LLLEMVSVVPDGIVCFFVSYSYMDAIVNTWNETGILKDIMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDNFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQP 345
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A7S1YWT9_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1YWT9_TRICV)

HSP 1 Score: 265 bits (678), Expect = 6.450e-87
Identity = 123/201 (61.19%), Postives = 158/201 (78.61%), Query Frame = 1 
Query:   13 MCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKP 615
            +C ++PDG+VAFF SYSYM  I+++W   G+L Q+ + KL+FIETKD+VETTLAL N++ AC  GRGA+FLSVARGKV+EGI+F  H+GR VI+FG+PFQYTL+H LRARL YL+  + I+E DFL FDALRQA+QC+GRVIRSK+DYG+M+ ADSRY + DK SKLP+WI Q +H   L+ S   A Q  + F R MA+P
Sbjct:    1 LCGSIPDGVVAFFTSYSYMESIISEWDGMGVLRQLTKHKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHVLRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKTDYGLMIFADSRYNRHDKRSKLPKWILQFMHDGYLNLSTDMALQHVKHFLRVMAQP 201
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A6N2KLZ5_SALVM (DNA helicase n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KLZ5_SALVM)

HSP 1 Score: 271 bits (692), Expect = 1.150e-85
Identity = 133/211 (63.03%), Postives = 161/211 (76.30%), Query Frame = 1 
Query:    1 LLIKMCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKPDPGLGT 633
            LL++M   VPDGIV FF SYSYM  I+  W++SG+L +I + KL+FIET+D+VETTLAL N++ AC  GRGA+F SVARGKVAEGIDF  H+GR+VI+FGIPFQYTL+  L ARL YLRD F I+E DFLTFDALRQAAQC+GRVIRSK+DYGMM+ AD RY + DK SKLP WI  HL    L+ S   A  +AR+F R MA+P    G+
Sbjct:  268 LLVEMVSIVPDGIVCFFVSYSYMDGIINTWNESGLLKEIMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGIPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGS 478
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A8J5SF54_ZIZPA (DNA helicase n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SF54_ZIZPA)

HSP 1 Score: 272 bits (695), Expect = 1.610e-85
Identity = 134/211 (63.51%), Postives = 160/211 (75.83%), Query Frame = 1 
Query:    1 LLIKMCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKPDPGLGT 633
            LL++M   VPDGIV FF SYSYM  IV  W++ GIL  I + KL+FIET D+VETTLAL N++ AC  GRGAIF SVARGKVAEGIDF  H+GR+VI+FG+PFQYTL+  L ARL YLR+ F I+E DFLTFDALRQAAQC+GRVIRSK+DYGMM+ AD RY + DK SKLP WI  HLH   L+ S   A  +AR+F R MA+P   +G+
Sbjct:  324 LLLEMSSAVPDGIVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIAREFLRRMAQPYDKMGS 534
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A7S2M061_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M061_9STRA)

HSP 1 Score: 261 bits (667), Expect = 2.170e-85
Identity = 123/205 (60.00%), Postives = 157/205 (76.59%), Query Frame = 1 
Query:    1 LLIKMCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKP 615
            +L+++C ++PDG+VAFF SYSYM  I+++W   GIL Q+ + KL+FIETKD+VETTLAL NF+ AC  GRGA+FLSVARGKV+EGI+F  H+GR VI+FG+PFQYTL+H LRARL YL+  + I+E DFL FDALRQA+QC+GRVIRSK DYG+M+ ADSRY + DK +KLP WI   L    L+ S   A    + F R MA+P
Sbjct:    3 MLVELCSSIPDGVVAFFTSYSYMESIISEWDGMGILRQLTKSKLVFIETKDVVETTLALDNFRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTNYQIREQDFLNFDALRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRTKLPGWIQNFLGDGQLNLSTDTAIAQVKHFLRVMAQP 207
[Close]
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Match: A0A0A9RIW3_ARUDO (DNA helicase n=2 Tax=Arundo donax TaxID=35708 RepID=A0A0A9RIW3_ARUDO)

HSP 1 Score: 271 bits (692), Expect = 2.390e-85
Identity = 133/211 (63.03%), Postives = 159/211 (75.36%), Query Frame = 1 
Query:    1 LLIKMCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVETTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQYTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGMMLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAKPDPGLGT 633
            LL++M   VPDGIV FF SYSYM  IV  W++ GIL  I + KL+FIET D+VETTLAL N++ AC  GRGA+F SVARGKVAEGIDF  H+GR+VI+FG+PFQYTL+  L ARL YLR+ F I+E DFLTFDALRQAAQC+GRVIRSK+DYGMM+ AD RY + DK SKLP WI  HLH   L+ S   A  +AR+F R MA+P    G+
Sbjct:  299 LLLEMASAVPDGIVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIAREFLRRMAQPYDKTGS 509
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10015.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A087HKM7_ARAAL4.150e-9062.56HELICc2 domain-containing protein n=1 Tax=Arabis a... [more]
A0A7S0FJQ4_9STRA9.240e-8961.95Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A087GZK3_ARAAL3.490e-8863.51HELICc2 domain-containing protein n=1 Tax=Arabis a... [more]
A0A2U1MI62_ARTAN7.130e-8863.90RAD3-like DNA-binding helicase protein n=1 Tax=Art... [more]
A0A7C9E1G5_OPUST6.130e-8764.39HELICc2 domain-containing protein n=1 Tax=Opuntia ... [more]
A0A7S1YWT9_TRICV6.450e-8761.19Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A6N2KLZ5_SALVM1.150e-8563.03DNA helicase n=1 Tax=Salix viminalis TaxID=40686 R... [more]
A0A8J5SF54_ZIZPA1.610e-8563.51DNA helicase n=1 Tax=Zizania palustris TaxID=10376... [more]
A0A7S2M061_9STRA2.170e-8560.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A0A9RIW3_ARUDO2.390e-8563.03DNA helicase n=2 Tax=Arundo donax TaxID=35708 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10015contigS-firma_F_contig10015:112..744 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LDN2
Preferred nameERCC2
PFAMsDEAD_2,HBB,Helicase_C_2
Max annot lvl2759|Eukaryota
KEGG koko:K10844
KEGG Pathwayko03022,ko03420,map03022,map03420
KEGG ModuleM00290
GOsGO:0000018,GO:0000019,GO:0000109,GO:0000112,GO:0000166,GO:0000428,GO:0000439,GO:0000717,GO:0000988,GO:0000990,GO:0000991,GO:0001109,GO:0001111,GO:0001112,GO:0001113,GO:0001120,GO:0001503,GO:0001701,GO:0001942,GO:0002244,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005675,GO:0005694,GO:0005700,GO:0005703,GO:0005705,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007049,GO:0007059,GO:0007088,GO:0007272,GO:0007275,GO:0007346,GO:0007348,GO:0007399,GO:0007417,GO:0007568,GO:0008022,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008366,GO:0008544,GO:0009058,GO:0009059,GO:0009266,GO:0009314,GO:0009408,GO:0009411,GO:0009416,GO:0009452,GO:0009628,GO:0009650,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009794,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009913,GO:0009987,GO:0010001,GO:0010389,GO:0010467,GO:0010468,GO:0010525,GO:0010528,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010628,GO:0010927,GO:0010948,GO:0010972,GO:0012501,GO:0014003,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016462,GO:0016591,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0021510,GO:0021700,GO:0021782,GO:0022008,GO:0022010,GO:0022402,GO:0022404,GO:0022405,GO:0022607,GO:0030097,GO:0030099,GO:0030154,GO:0030182,GO:0030198,GO:0030218,GO:0030282,GO:0030554,GO:0030855,GO:0030880,GO:0031214,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031974,GO:0031981,GO:0032288,GO:0032289,GO:0032291,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032806,GO:0032989,GO:0032991,GO:0033043,GO:0033554,GO:0033683,GO:0034101,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035264,GO:0035315,GO:0035639,GO:0036094,GO:0036211,GO:0036260,GO:0040007,GO:0040016,GO:0042063,GO:0042303,GO:0042552,GO:0042592,GO:0042623,GO:0042633,GO:0043009,GO:0043062,GO:0043139,GO:0043141,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043249,GO:0043254,GO:0043388,GO:0043412,GO:0043588,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045786,GO:0045893,GO:0045911,GO:0045930,GO:0045935,GO:0045944,GO:0045951,GO:0045995,GO:0046483,GO:0047485,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048589,GO:0048646,GO:0048699,GO:0048709,GO:0048731,GO:0048820,GO:0048821,GO:0048856,GO:0048863,GO:0048869,GO:0048872,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051239,GO:0051252,GO:0051254,GO:0051276,GO:0051301,GO:0051716,GO:0051726,GO:0051783,GO:0051983,GO:0055029,GO:0060218,GO:0060255,GO:0060429,GO:0061515,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070816,GO:0070911,GO:0071103,GO:0071695,GO:0071704,GO:0071817,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090575,GO:0097159,GO:0097367,GO:0097659,GO:0098687,GO:0098773,GO:0140097,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902494,GO:1902554,GO:1902680,GO:1902749,GO:1902750,GO:1902911,GO:1903506,GO:1903508,GO:1990234,GO:1990391,GO:2000026,GO:2000112,GO:2001141
Evalue9.02e-84
EggNOG OGsCOG1199@1|root,KOG1131@2759|Eukaryota
Ec32 ortholog descriptionATP-dependent helicase, C-terminal
Ec32 orthologEc-19_001310.1
EC3.6.4.12
DescriptionATP-dependent DNA helicase activity
COG categoryKL
BRITEko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Exons1
Model size633
Cds size621
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815525.2455037-UTR-S-firma_F_contig10015:111..1231622815525.2455037-UTR-S-firma_F_contig10015:111..123Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10015 112..123 +
1696949387.9671504-UTR-S-firma_F_contig10015:111..1231696949387.9671504-UTR-S-firma_F_contig10015:111..123Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10015 112..123 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815525.2582238-CDS-S-firma_F_contig10015:123..7441622815525.2582238-CDS-S-firma_F_contig10015:123..744Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10015 124..744 +
1696949387.9868815-CDS-S-firma_F_contig10015:123..7441696949387.9868815-CDS-S-firma_F_contig10015:123..744Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10015 124..744 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10015.75.1prot_S-firma_F_contig10015.75.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10015 124..744 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10015.75.1

>prot_S-firma_F_contig10015.75.1 ID=prot_S-firma_F_contig10015.75.1|Name=mRNA_S-firma_F_contig10015.75.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=207bp
MCETVPDGIVAFFPSYSYMTFIVTQWSKSGILHQIQERKLLFIETKDIVE
TTLALSNFKAACSRGRGAIFLSVARGKVAEGIDFKGHFGRMVILFGIPFQ
YTLAHTLRARLAYLRDQFGIQESDFLTFDALRQAAQCMGRVIRSKSDYGM
MLLADSRYGKQDKYSKLPRWISQHLHGDVLSTSIIEATQLARQFYRDMAK
PDPGLGT
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mRNA from alignment at S-firma_F_contig10015:112..744+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10015.75.1 ID=mRNA_S-firma_F_contig10015.75.1|Name=mRNA_S-firma_F_contig10015.75.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=633bp|location=Sequence derived from alignment at S-firma_F_contig10015:112..744+ (Sphaerotrichia firma ET2_F female)
CTCCTCATCAAAATGTGTGAGACGGTCCCCGACGGCATTGTGGCCTTTTT
CCCCAGCTACTCCTACATGACCTTCATCGTGACGCAGTGGAGCAAGTCTG
GGATCCTGCACCAAATCCAGGAGCGCAAGCTGCTGTTCATTGAGACGAAG
GACATTGTGGAAACCACGCTGGCGCTGTCCAACTTCAAGGCGGCGTGCTC
CCGTGGGCGGGGTGCCATTTTCCTGTCCGTGGCCCGGGGCAAGGTCGCGG
AGGGCATTGACTTCAAGGGCCACTTTGGGCGCATGGTGATTTTGTTTGGG
ATCCCGTTCCAGTACACGCTGGCGCACACCCTGCGGGCCCGCCTGGCGTA
CCTCCGGGACCAGTTCGGCATCCAGGAGTCCGACTTCTTGACGTTTGACG
CCCTGCGCCAGGCGGCGCAGTGCATGGGGCGCGTCATCCGGTCCAAGTCC
GACTACGGCATGATGCTGCTGGCGGACTCCCGGTACGGCAAGCAGGACAA
GTACTCCAAGCTGCCCCGGTGGATTTCGCAGCACCTCCACGGCGACGTGC
TGAGCACGTCCATCATTGAGGCCACGCAGCTGGCGCGGCAGTTTTACAGG
GATATGGCAAAGCCGGACCCCGGGCTGGGCACC
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Coding sequence (CDS) from alignment at S-firma_F_contig10015:112..744+

>mRNA_S-firma_F_contig10015.75.1 ID=mRNA_S-firma_F_contig10015.75.1|Name=mRNA_S-firma_F_contig10015.75.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1242bp|location=Sequence derived from alignment at S-firma_F_contig10015:112..744+ (Sphaerotrichia firma ET2_F female)
ATGTGTGAGACGGTCCCCGACGGCATTGTGGCCTTTTTCCCCAGCTACTC
CTACATGACCTTCATCGTGACGCAGTGGAGCAAGTCTGGGATCCTGCACC
AAATCCAGGAGCGCAAGCTGCTGTTCATTGAGACGAAGGACATTGTGGAA
ACCACGCTGGCGCTGTCCAACTTCAAGGCGGCGTGCTCCCGTGGGCGGGG
TGCCATTTTCCTGTCCGTGGCCCGGGGCAAGGTCGCGGAGGGCATTGACT
TCAAGGGCCACTTTGGGCGCATGGTGATTTTGTTTGGGATCCCGTTCCAG
TACACGCTGGCGCACACCCTGCGGGCCCGCCTGGCGTACCTCCGGGACCA
GTTCGGCATCCAGGAGTCCGACTTCTTGACGTTTGACGCCCTGCGCCAGG
CGGCGCAGTGCATGGGGCGCGTCATCCGGTCCAAGTCCGACTACGGCATG
ATGCTGCTGGCGGACTCCCGGTACGGCAAGCAGGACAAGTACTCCAAGCT
GCCCCGGTGGATTTCGCAGCACCTCCACGGCGACGTGCTGAGCACGTCCA
TCATTGAGGCCACGCAGCTGGCGCGGCAGTTTTACAGGGATATGGCAAAG
CCGGACCCCGGGCTGGGCACCATGTGTGAGACGGTCCCCGACGGCATTGT
GGCCTTTTTCCCCAGCTACTCCTACATGACCTTCATCGTGACGCAGTGGA
GCAAGTCTGGGATCCTGCACCAAATCCAGGAGCGCAAGCTGCTGTTCATT
GAGACGAAGGACATTGTGGAAACCACGCTGGCGCTGTCCAACTTCAAGGC
GGCGTGCTCCCGTGGGCGGGGTGCCATTTTCCTGTCCGTGGCCCGGGGCA
AGGTCGCGGAGGGCATTGACTTCAAGGGCCACTTTGGGCGCATGGTGATT
TTGTTTGGGATCCCGTTCCAGTACACGCTGGCGCACACCCTGCGGGCCCG
CCTGGCGTACCTCCGGGACCAGTTCGGCATCCAGGAGTCCGACTTCTTGA
CGTTTGACGCCCTGCGCCAGGCGGCGCAGTGCATGGGGCGCGTCATCCGG
TCCAAGTCCGACTACGGCATGATGCTGCTGGCGGACTCCCGGTACGGCAA
GCAGGACAAGTACTCCAAGCTGCCCCGGTGGATTTCGCAGCACCTCCACG
GCGACGTGCTGAGCACGTCCATCATTGAGGCCACGCAGCTGGCGCGGCAG
TTTTACAGGGATATGGCAAAGCCGGACCCCGGGCTGGGCACC
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