prot_S-firma_F_contig10515.723.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10515.723.1
Unique Nameprot_S-firma_F_contig10515.723.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length102
Homology
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 2.810e-53
Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 0
Query:    1 RYLPECANDLSREFKMDILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRIL 93
            RYLPECAN+LSREFKMDILPAGARCAMQHMPRESR F+GPNLYITPPGSWTQ HQDGNGTVDSGHQCLAGRNRVIMLRRLD EEDKRAALRIL
Sbjct:  270 RYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQCHQDGNGTVDSGHQCLAGRNRVIMLRRLDREEDKRAALRIL 362          
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: A0A7S2DKI0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKI0_9STRA)

HSP 1 Score: 132 bits (332), Expect = 8.410e-36
Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 0
Query:    1 RYLPECANDLSREFKMDILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRILS 94
            +YLPE   DL+R  K+D+LP G RC ++H+P    PF+GPNLYITPPG++T FHQDG+GTVDSGH CL GRN V+MLRRLD E +K  ALRIL+
Sbjct:   55 KYLPELQADLTRHLKLDLLPRGERCMLRHLPLNGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHLCLRGRNEVVMLRRLD-EPNKLRALRILN 147          
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: A0A7S2SQY1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY1_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.250e-35
Identity = 62/96 (64.58%), Postives = 76/96 (79.17%), Query Frame = 0
Query:    1 RYLPECANDLSREFKMDILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRILSEG 96
            ++LPE   DL R FK+D+LP G RC  +H+P    PF+GPNLYITPPG++T FHQDG+GTVDSGHQCL GRN V+MLRR+D E +KR ALRIL +G
Sbjct:  644 KHLPELFCDLERNFKVDLLPRGRRCLFRHLPLRGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHQCLRGRNEVVMLRRMD-EPNKRHALRILCKG 738          
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: A0A7S1CQ01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ01_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.370e-30
Identity = 52/92 (56.52%), Postives = 70/92 (76.09%), Query Frame = 0
Query:    3 LPECANDLSREFKMDILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRILS 94
            LP  A DL+  + ++ LPAG+ C +Q +P + RPF+GPNLY+TPPGS+T  H+DG GT+DSGHQ + G N VIMLRR+D E  KRAA+RI++
Sbjct:   36 LPNLAADLAANYGIETLPAGSNCMLQALPEKGRPFMGPNLYVTPPGSFTWTHEDGRGTLDSGHQTITGYNEVIMLRRMD-EVGKRAAMRIMA 126          
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: A0A7S2VFF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VFF2_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.430e-26
Identity = 53/93 (56.99%), Postives = 64/93 (68.82%), Query Frame = 0
Query:    3 LPECANDLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRILS 94
            LP+   DL   FK+  ILP G+ C M  +    RPF+GPNLYITPP S+T FHQDG+GTVDSGH CL+G N V+MLRRL  E  K  AL +L+
Sbjct:    1 LPKSFEDLQNNFKLSSILPGGSHCMMNAVNINGRPFMGPNLYITPPSSFTHFHQDGHGTVDSGHLCLSGYNEVVMLRRLP-ERHKCRALELLN 92          
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: A0A7S1ZIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIK7_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.250e-25
Identity = 54/100 (54.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:    1 RYLPECANDLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRILSEGGKG 99
            + LP    D   +FKM   LP G  C M  +    RPF+GPN+Y+TPPGS+T FHQDG+GTVDSGHQCL+G N V+MLRRL  E  K+ AL++L   G G
Sbjct:  698 KLLPPLYEDFINKFKMPGCLPGGIHCMMNSVNAGGRPFMGPNIYLTPPGSFTHFHQDGHGTVDSGHQCLSGYNEVVMLRRL-TERHKQHALQLLRGEGNG 796          
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: A0A7S3Q867_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q867_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.160e-25
Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    1 RYLPECANDLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRIL 93
            R LPE  ND  + F++   LP G  C M  +    RPF+GPNLY+TPPGS+T FHQDG+GTVDSGH C+ G N VIMLRR+ +E+ KR AL +L
Sbjct:  508 RTLPESHNDFLKNFRLPKCLPGGDFCMMNSVNDLGRPFMGPNLYVTPPGSFTHFHQDGHGTVDSGHMCIDGYNEVIMLRRM-SEDHKRQALHLL 600          
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: K0SGJ8_THAOC (C2H2-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SGJ8_THAOC)

HSP 1 Score: 108 bits (269), Expect = 3.210e-25
Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 0
Query:    1 RYLPECANDLSREFKM-DILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRILSEGGKGKGT 102
            + LP+  +DL   F +  ILP G+ C M  +    RPF+GPNLYITPP S+T FHQDG+GTVDSGH CL+G N V+MLRRL  E  K  ALR+L+     K T
Sbjct:  864 KLLPQSFDDLKNNFMLPSILPGGSHCMMNALNVNGRPFMGPNLYITPPASFTHFHQDGHGTVDSGHLCLSGYNEVVMLRRL-TERHKYHALRLLTGASDSKKT 965          
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: B8CCF4_THAPS (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCF4_THAPS)

HSP 1 Score: 107 bits (267), Expect = 5.860e-25
Identity = 52/95 (54.74%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    1 RYLPECANDLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRILS 94
            + LP+   D  R FK+  ILP G+ C M  +    RPF+GPNLY+TPP S+T FHQDG+GTVDSGH C  G N V+MLRRL  E  K  ALR+L+
Sbjct:  597 KLLPQTYEDFRRNFKLPGILPGGSHCMMNAVNEGGRPFMGPNLYVTPPSSFTHFHQDGHGTVDSGHHCREGYNEVVMLRRL-TERHKHHALRLLN 690          
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Match: A0A1E7FK00_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK00_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.770e-24
Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 0
Query:    1 RYLPECANDLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRILS 94
            R +P    +    F++  +LP G+ C M  +  E+RPF+GPNLY+TPP S+T FHQDG+GTVDSGH C++G N VIMLRRL  E  KR AL ILS
Sbjct:  613 RLMPLLNENFLESFELSSVLPGGSHCMMNSVTPEARPFMGPNLYVTPPASFTHFHQDGHGTVDSGHLCISGFNEVIMLRRL-TERHKRHALWILS 706          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10515.723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LCL4_ECTSI2.810e-5394.62ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S2DKI0_9STRA8.410e-3663.83Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A7S2SQY1_9STRA3.250e-3564.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1CQ01_9STRA1.370e-3056.52Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2VFF2_9STRA2.430e-2656.99Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S1ZIK7_9STRA1.250e-2554.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3Q867_9STRA3.160e-2556.38Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
K0SGJ8_THAOC3.210e-2553.40C2H2-type domain-containing protein n=1 Tax=Thalas... [more]
B8CCF4_THAPS5.860e-2554.74RanBP2-type domain-containing protein (Fragment) n... [more]
A0A1E7FK00_9STRA2.770e-2454.74Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 2..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10515contigS-firma_F_contig10515:3943..4647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10515.723.1mRNA_S-firma_F_contig10515.723.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10515 3943..4647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10515.723.1 ID=prot_S-firma_F_contig10515.723.1|Name=mRNA_S-firma_F_contig10515.723.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=102bp
RYLPECANDLSREFKMDILPAGARCAMQHMPRESRPFLGPNLYITPPGSW
TQFHQDGNGTVDSGHQCLAGRNRVIMLRRLDNEEDKRAALRILSEGGKGK
GT
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