mRNA_S-firma_F_contig1050.705.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: A0A6H5K168_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K168_9PHAE) HSP 1 Score: 707 bits (1825), Expect = 1.440e-245 Identity = 375/485 (77.32%), Postives = 404/485 (83.30%), Query Frame = 1
Query: 319 GALSADSNAFRLVQYREAVELQTAMYELTPQNTGDAKDEDAEILLVSMVHLADQDYYTEIMREADSFDRVLFELIAGPDVSGLDSAGNRAVTEYVYPTREQDMLARNYGLAAQLNCLNYCYLCTKRTDDGSSGRAGASRWNSSKKC------GPRWVLADLTRDRIRSLQQSEGEKEIGQTGWQGFMEEVTRALVVGRQAGDKILPKFFPPLGSSLNRPALVLRALLWLVPSPEAGIMCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDEVVVKARNRVVVEEAERALKDGCRKIMVLYGGLHMQDLSAQLCKQLGATREPAGWRTAWVVPTKAR----AANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALVISALYVARHAYLYYGLARWLVEWEKKLF 1743
GAL D NAFRLVQYR+AVELQTA Y+L P+ + D D I+LVSMVHLADQ YYTEIMR+A S+DRVLFELIAGP VS LD+ GNRAVTEYVYPTREQD LARNYGL+AQLNCLNYC+LC +RTDDG+S GPRWVLADLTRD IRSLQQ GEKEIGQ GWQGF++EVTRALVVGRQAGDKILPKF+PPLGS+LNRPALVLRALLWL P PEA IMC+DWARSYPRAGG+SVLAS+IAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQS+ +VVKARN+VVVEE ERAL +GCRKIMVLYGGLHMQDL+ QLCKQL AT++ AGWRTAWVVPTKAR AA PRMAS DAAA GRLEQ Q GQVGMLGDE D M RWGPL VAALAYVAVGAWDWTDTVEALARELET G PLEAFGSAL++ LYVARHAYLYYGLARWLV+WEKKLF
Sbjct: 65 GALPKDDNAFRLVQYRDAVELQTAAYKLRPRTSEDGVD----IVLVSMVHLADQAYYTEIMRDASSYDRVLFELIAGPGVSELDADGNRAVTEYVYPTREQDDLARNYGLSAQLNCLNYCHLCKERTDDGTSXXXXXXXXXXXXXXXXXSNGGPRWVLADLTRDEIRSLQQQAGEKEIGQGGWQGFIDEVTRALVVGRQAGDKILPKFYPPLGSTLNRPALVLRALLWLTPCPEAEIMCYDWARSYPRAGGLSVLASAIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSNAIVVKARNQVVVEETERALVEGCRKIMVLYGGLHMQDLTFQLCKQLDATQDIAGWRTAWVVPTKARQKANAATSPVPPRMASADAAA--GRLEQAQ----GQVGMLGDETNADGM-ARWGPLGVAALAYVAVGAWDWTDTVEALARELETDGSPLEAFGSALLVFTLYVARHAYLYYGLARWLVQWEKKLF 538
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: D8LF12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF12_ECTSI) HSP 1 Score: 389 bits (999), Expect = 4.850e-126 Identity = 203/248 (81.85%), Postives = 218/248 (87.90%), Query Frame = 1
Query: 1012 MCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDEVVVKARNRVVVEEAERALKDGCRKIMVLYGGLHMQDLSAQLCKQLGATREPAGWRTAWVVPTKAR----AANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALVISALYVARHAYLYYGLARWLVEWEKKLF 1743
MC+DWARSYPRAGG+SVLAS+IAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSD +VVKARN+VVVEE ERAL +GCRKIMVLYGGLHMQDL++QLCKQL AT++ GWRTAWVVPT+AR AA PRMAS DAAA GRLEQ Q G+GQVGMLGDE D M RWGPL VAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSAL++ LYVARHAYLYYGLARWLV+WEKKLF
Sbjct: 1 MCYDWARSYPRAGGLSVLASAIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDAIVVKARNQVVVEETERALAEGCRKIMVLYGGLHMQDLTSQLCKQLDATQDITGWRTAWVVPTRARQKANAATSPVPPRMASADAAA--GRLEQGQ--GQGQVGMLGDETNADGM-ARWGPLGVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALLVFTLYVARHAYLYYGLARWLVQWEKKLF 243
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: A0A835ZAI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI6_9STRA) HSP 1 Score: 271 bits (693), Expect = 5.050e-79 Identity = 177/453 (39.07%), Postives = 239/453 (52.76%), Query Frame = 1
Query: 421 DAKDEDAEILLVSMVHLADQDYYTEIMREADSFDRVLFELIAGPDVSGLDSAGNRAVTEYVYPTREQDMLARNYGLAAQLNCLNYCYLCTKRTDDGSSGRAGASRWNSSKKCGPRWVLADLTRDRIRSLQQSEGEKEIGQT-GWQGFMEEVTRALVVGRQAGDKILPKFFPPLGSSLNRPALVLRALLWLVPSPEAGIMCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQ--------------------SDEVVVKARNRVVVEEAERALKDGCRKIMVLYGGLHMQDLSAQLCKQLGATREPAGWRTAWVVPTKARAANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALVISALYVARHAYLYYGLARW 1716
D D D E+ L+S+VHLAD YY ++ ++ +DR L+ELI + + + G R VT + PT Q LAR+YGLA Q+ CL+ +R WVLAD++R+R+++LQ+ GE G+ G M+EV +ALVVGR A ++LPKFF L LN AL LRAL+WL+P PEA +M DWAR++P AGGVS + S++ + VL+GD TAKKL FAQQ+VSGQ G S +V++ RN V+ E R+ G +++ V+YG LHM+DL +L +LG R W TAW +P AN R A+ +A RRW + AALAY AVGAWDW+DT ++ ELE G +A G+A LYV RH YLYYGLA+W
Sbjct: 3 DNADGDFEVDLISVVHLADPSYYHQLQADSAIYDRYLYELITSETSTAIGADGLRRVTADMQPTEGQVALARSYGLAPQMMCLDL-----RRHQH--------------------WVLADMSRERLQALQRESGEAVWGERLGIVEHMQEVGKALVVGRTADGRVLPKFF--LTGGLNASALALRALMWLMPCPEAQVMLLDWARAWPAAGGVSAVLSAVIDRVLAGDIATAKKLAFAQQLVSGQRSGXXXXXXXXXXXXXXXXXXXXXXXXXSADVLMTGRNAEVMRELRRSRLAGLQRVGVMYGCLHMRDLQERLRGELGMDRVGVRWVTAWDIPIGPATANQ---GRPAAEEA-------------------------------RRWATVAGAALAYTAVGAWDWSDTFLHVSSELERG-LSTDAAGAAAGAIGLYVLRHVYLYYGLAKW 393
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: A0A6U9RMG6_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RMG6_9CHLO) HSP 1 Score: 182 bits (463), Expect = 1.960e-46 Identity = 141/484 (29.13%), Postives = 223/484 (46.07%), Query Frame = 1
Query: 331 ADSNAFRLVQYREA-VELQTAMYELTPQNTGDAKD-EDAEILLVSMVHLADQDYYTEIMREADSFDRVLFELIAGPDVSGLDSAGNRAVTEYVYPTREQDMLARNYGLAAQLNCLNYCYLCTKRTDDGSSGRAGASRWNSSKKCGPRWVLADLTRDRIRSLQQSEGEKEIGQTGWQGFMEEVT---RALVVGRQAG---DKILPKFFPPLGSSLNRPALVLRALLWLVPSPEAGIMCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDEVVVKARNRVVVEEAERALKDGCRKIMVLYGGLHMQDLSAQLCKQLGATREPAGWRTAWVVPTKARAANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALVISALYVARHAYLYYGLARWLVEWEKKLF*KSES 1758
A + R+ + +E VELQ+A+ G KD ++ LVS+VH+A+ +YY I + S DRVLFE+I + +D G + + ++PT +Q A YGL +QL ++ C+ R G W LADL ++ ++ LQ+ E G + W + +T R LV GR G DK++ RALLW+ P PEAG++ DWA + G + + +A ++L+ D+ ++KL FAQ +VSGQA G + ++ RN + +A++DGC++I VLYGGLHM+DLS +L +L + W W V + + L VG L VA LA + + A+DW +T+ + T GP + ++L + Y+ RHA +Y L RWL+EW+++LF + +
Sbjct: 50 AQTRFLRIERSKEGRVELQSAVARFF----GTGKDGSQVQVDLVSLVHVAEGEYYRRIQEQCASCDRVLFEMITTRENVKVDHGGRKTLKHRMFPTAQQIQTAGAYGLTSQLQSMD-CF------------REG-------------WYLADLEKEEVQKLQERAQEAVWGASAWGSCAQNITDALRLLVGGRSRGTVKDKLV------------------RALLWITPCPEAGLLLLDWAW---QGGRPAPILLPLASALLALDYPASQKLVFAQDLVSGQASGFTATDPETTLIGKRNEAAIAAVSQAIEDGCKRIAVLYGGLHMKDLSRRLEVELDFYQTGEEWNVVWGV----------------------------------DRRPATLPAAVG----------LAVACLALLGIDAFDWFNTLAIVVESWATSGP----YAASLSVLP-YLLRHAIVYLSLGRWLLEWDRELFQEERA 433
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: W7TQV4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQV4_9STRA) HSP 1 Score: 172 bits (436), Expect = 6.460e-42 Identity = 149/498 (29.92%), Postives = 225/498 (45.18%), Query Frame = 1
Query: 334 DSNAFRLV--QYREAVELQTAMYELTPQNTGDAKDEDAEILLVSMVHLADQDYYTEIMREADSFDRVLFELIAGPDVSGLDSAGN--RAVTEYVYPTREQ-----------DMLARNYGLAAQLNCLNYCYLCTKRTDDGSSGRAGASRWNSSKKCGPRWVLADLTRDRIRSLQQSEGEKEIGQT--GWQGFMEEVTRALVVGRQAGDKILPKF-FPPLGSSLNR-PALVLRALLWLVPSPEAGIMCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDEVVVKARNRVVVEEAERALKDGCRKIMVLYGGLHMQDLSAQLCKQLGATREPAGWRTAWVVPTKARAANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALA-----YVAVGAWDWTDTVEALARELE----TGGPPLEAFGSALVISALYVARHAYLYYGLARWLVEWEKKLF 1743
D+ FRL+ Q + QTA+ +L Q G + + L+ VH+A+ Y+ + D VL+E+I S GN R T+ +P++EQ LA ++GL QL+ +++ KK W L+D+ R+ + LQ+ GE+ + G G + EV G + K+LPKF F G + + P VLR +WL P+PE ++ DWAR YP AGG+S + S+ +++ GDF T ++L FAQ + S Q + EV+V+ R+ VV + E+AL+ G + + VLYGGLH++D+ A+L L TR G AG E + E Q R+ L+ A Y++VG DW+ T LA+++ T G EA LY+ RH Y+YYGL+RW+VEWEK+LF
Sbjct: 120 DNGPFRLLFDQATDRFLFQTAVVDL--QQPG---QDGPRVRLIGSVHIAEPAYFKALEASCADCDVVLYEMIT--------SEGNVLRDGTDARWPSKEQLGVELQATDGLRRLASSHGLEPQLDNMHFF----------------------GKK---NWYLSDIVREELCKLQRLRGERTLDAPAKGRLGHVFEVLEVFWNGFTSRGKVLPKFLFLRPGQAFSALPFRVLRLCMWLTPAPELQLLLLDWARQYPPAGGLSRVLRSMVGALVQGDFLTLRRLAFAQMLTSSQTA-----PAPEVLVQERDSKVVLDVEQALRTGAKDVGVLYGGLHLKDIEAKLRGHLNFTRVEGGMEKG--------------------------AGGQETLKRGREAQAVQWHTAWTMQAFTRQRQALVTALCVALPALYLSVGGLDWSATFGGLAKDVSQHVATEGTAAEAPTVGWQEVVLYMLRHMYIYYGLSRWVVEWEKQLF 548
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: C1N0I4_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N0I4_MICPC) HSP 1 Score: 120 bits (300), Expect = 9.900e-25 Identity = 131/468 (27.99%), Postives = 187/468 (39.96%), Query Frame = 1
Query: 442 EILLVSMVHLADQDYYTEIMREADS-FDRVLFELIA-------GPDVSGLDSAGNR----------------AVTEYVYPTREQDMLARNYGLAAQLNCLNYCYLCTKRTDDGSSGRAGASRWNSSKKCGPRWVLADLTRDRIRSLQQSEGEKEIGQTGWQGFMEEVTRALVVGRQAGDKILPKFFPPL-----GSSLNRPALVL-RALLWLVPSPEAGIMCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSD-EVVVKARNRVVVEEAERALKD-GCRKIMVLYGGLHMQDLSAQLCKQLG--ATREPAGWRTAWVVPTKARAANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALVISALYVARHAYLYYGLARWLVEWEKKLF 1743
EI L S VH+ + YY + E D+ +D VLFELI G D+ G R A+ + PT + LA +GL AQL+ L+ + D RW +ADL R + Q GE+ G Q ++ + A A LP L G + PA L R++ WLVP PEA ++ DW G + + +++ SGD A++L FAQ IVS QA G G +D V+V RN +E +A G +I +LYGGLHM L++++ +LG T P+ WR W + P + +A R RW L + L V DW T+ +A T A + LYV RH +YYGL +W++EW ++LF
Sbjct: 118 EISLTSTVHVGEPSYYAALQEECDARYDAVLFELITSEENLRPGRAPPPRDADGTRRXXXXXXXXXXXDFLPALAARLSPTPDARALAEAHGLRAQLDALDL------QRD--------------------RWFVADLPRSVLMRAQVEAGER-----GAQLSRDDASAA------ASAAALPPALEALVVTATGRAGGGPARQLTRSMCWLVPCPEAHLLLLDWVWG---GGRPAPALGATLDAIASGDVMAARRLAFAQMIVSAQAKGAVGGGADVPVLVLRRNDAAIECVRKAAATRGVNRIALLYGGLHMPGLTSKVMNELGYEITGAPS-WRAVWKID---------------GPSSRSAVARSRSAVW--------------------RWAALPLLLL----VDGADWAFTLSDVAASPAT----------AAIEIGLYVVRHGAVYYGLGKWVLEWNRQLF 495
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: C1FJM4_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FJM4_MICCC) HSP 1 Score: 115 bits (289), Expect = 2.880e-23 Identity = 124/486 (25.51%), Postives = 180/486 (37.04%), Query Frame = 1
Query: 415 TGDAKDEDAEILLVSMVHLADQDYYTEIMREADS-FDRVLFELIAGPDV-----------SGLDSAGNRAVTEY---------------VYPTREQDMLARNYGLAAQLNCLNYCYLCTKRTDDGSSGRAGASRWNSSKKCGPRWVLADLTRDRIRSLQQSEGEKEIGQTGWQ------GFMEEVTRALVV---GRQAGDKILPKFFPPLGSSLNRPALVLRALLWLVPSPEAGIMCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSD-EVVVKARNRVVVEEAERALK-DGCRKIMVLYGGLHMQDLSAQLCKQLGATREPAGWRTAWVVPTKARAANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALVISALYVARHAYLYYGLARWLVEWEKKLF*KSES 1758
TG+ E+ L + VH+ D YY + E D+ +D VLFELI G + G G+ ++ + PT + LA + L QL+ L+ C G W +AD+ + + LQ GE + + ALVV GR G PL + R + WLVP PEA ++ DW R V ++ +S+ G+ A++L FAQ IVS QA G G +D V+V+ RN V E +AL G ++ +LYGGLHM L+ +L +QLG WR W R+ P A A RW L + + DW T+ A + + ALYV RH +YY L +W++EW ++LF S+
Sbjct: 135 TGECVAPAQEVALAATVHVGDPTYYQGLQEECDADYDAVLFELITGEENLREGRAPESTRGGARHGGDEDEDDHNRDRRDPFLPQLAVALAPTPDARRLADTHFLVPQLDALDLC--------------------------GDNWYVADMPKQELARLQAEAGEAMMATSSRSVPGPSVPTTSPALEALVVTAKGRAGGG--------PLRQAT-------RLVCWLVPCPEAHLLLLDWVWGGGRPAPV---LGALLDSLAGGNIIAARRLAFAQMIVSAQAKGAVGGGADVPVLVERRNDVATECLAKALDAPGVSRVSLLYGGLHMPGLTRRLTEQLGLEPSTQRWRAVW---------------RVEPPGANNAV----------------------------RWAALPLLLF----LDGTDWAATITDAAAAADXXXXXXXXX-----MGALYVVRHGAVYYSLGKWVLEWNRQLFDGSDG 524
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: A0A7S0KSU8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KSU8_MICPS) HSP 1 Score: 104 bits (260), Expect = 9.850e-22 Identity = 80/264 (30.30%), Postives = 114/264 (43.18%), Query Frame = 1
Query: 973 ALLWLVPSPEAGIMCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSD-EVVVKARNRVVVEEAERALK-DGCRKIMVLYGGLHMQDLSAQLCKQLGATREPAGWRTAWVVPTKARAANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALVISALYVARHAYLYYGLARWLVEWEKKLF*KSES 1758
A+ WLVP PEA ++ DW R V ++ +S+ G+ A++L FAQ IVS QA G G +D V+V+ RN V E AL G ++ +LYGGLHM L+ +L + LG WR W R+ P A A RW +A + + DW T+ A + G A G+A + ALYV RH +YY L +W++EW ++LF S+
Sbjct: 1 AVCWLVPCPEAHLLLLDWVWGGGRPAPV---LGALLDSLAGGNIIAARRLAFAQMIVSAQAKGAVGGGADVPVLVERRNDVATECLAVALNAPGVSRVTLLYGGLHMPGLTRRLTEGLGLEPSTQRWRAVW---------------RVEPPGANNAV----------------------------RW----LALPLLLFIDGTDWAATITDAAAAADAG-----AIGAAAAMGALYVVRHGAVYYSLGKWVLEWNRQLFDGSDG 209
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: A4S4P5_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S4P5_OSTLU) HSP 1 Score: 106 bits (264), Expect = 2.210e-20 Identity = 127/471 (26.96%), Postives = 188/471 (39.92%), Query Frame = 1
Query: 379 LQTAMYELTPQNTGDAKDEDAEILLV-SMVHLADQDYYTEIMREADSF--DRVLFELIAG-PDVSGLDSAGNRA--VTEYVYPTREQDMLARNYGLAAQLNCLNYCYLCTKRTDDGSSGRAGASRWNSSKKCGPRWVLADLTRDRIRSLQQSEGEKEIGQTGWQGFMEEVTRALVVGRQAGDKILPKFFPPLG------SSLNRPA-LVLRALLWLVPSPEAGIMCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDE-VVVKARNRVVVEEAERALK-DGCRKIMVLYGGLHMQDLSAQLCKQLGATREPAGWRTAWVVPTKARAANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALAYVAVGAWDWTDTV-EALARELETGGPPLEAFGSALVISALYVARHAYLYYGLARWLVEWEKKLF 1743
LQ+A L P+ DA L V ++VH + YY + ++ ++ D L ELI + D G + ++E + PT E LA +GL AQL+ L+ RA W +AD+TR+ + +L++ GE EE TR + LP L +S PA L R W VP PEA ++ DW + G S + ++ + SGD +A++L FAQ IVS QA G G S E V+V RN V ++ +A K + +LYGGLH+ L ++L WR AW + P ASP + PLI+ + DW T+ +A+A G ++ + LY+ RH LYY L +WL+EW ++LF
Sbjct: 74 LQSATVTLRPR---DASARATRALRVCALVHYGEARYYRGVAKDFETRENDATLVELITSRKHLEASDERGLKLWRLSEALAPTAEARALANAHGLRAQLDALD--------------ARARG------------WYVADVTREELIALRREAGEMTAKTA------EETTRNAKRSAVSMGGNLPPALEALAVTAFGRASEGDPARLFARLSCWFVPCPEAHLLLLDWVWA---GGRPSEVLGAMVDCCASGDLESARRLAFAQMIVSAQAEGPAGGGSTEPVLVARRNDVAMDGVNKAFKAPEIDTVNLLYGGLHVPGLVRCARERLDMEVVDVAWRDAW----------RVQPPENASP-------------------------------LRYAIVPLILG------IDGTDWAQTLHDAVALGASAG----------ILSTFLYIVRHGALYYALGKWLLEWNRQLF 449
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Match: A0A090MBZ6_OSTTA (Unnamed product n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090MBZ6_OSTTA) HSP 1 Score: 102 bits (254), Expect = 3.720e-19 Identity = 128/474 (27.00%), Postives = 186/474 (39.24%), Query Frame = 1
Query: 379 LQTAMYELTPQ----NTGDAKDEDAEILLVSMVHLADQDYYTEIMREADSFDR----VLFELIAGP------DVSGLDSAGNRAVTEYVYPTREQDMLARNYGLAAQLNCLNYCYLCTKRTDDGSSGRAGASRWNSSKKCGPRWVLADLTRDRIRSLQQSEGEKEIGQTGWQGFMEEVTRALVVGRQAGDKILPKFFPPLGSSLNR-PA-LVLRALLWLVPSPEAGIMCFDWARSYPRAGGVSVLASSIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDE-VVVKARNRVVVEEAERALK-DGCRKIMVLYGGLHMQDLSAQLCKQLGATREPAGWRTAWVVPTKARAANMITAPRMASPDAAAAAGRLEQRQMQGEGQVGMLGDEVGDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALVISA-LYVARHAYLYYGLARWLVEWEKKLF 1743
LQ+A L P+ T E+ + ++VH ++YY + R+ + +R L ELI V G R TE + PT E LA +GL+AQL+ L+ +R N W +AD+TR+ + +L++ GE G G + L +A G S R PA L R WLVP PEA ++ DW + R V ++ + +GD +A++L FAQ IVS QA G G SDE V+V RN V ++ +A ++ +LYGGLH L +L WR AW + P ASP + PL++ + DW T+ + GP A V+S LY+ RH LYY L +WL+EW ++LF
Sbjct: 64 LQSATVTLRPRLGARATASTSGRGRELKVCALVHYGGEEYYRGVSRDFAAREREGAATLVELITSRANLIDGSVDGRGVKLFRLGTE-LGPTAEAKALAAAHGLSAQLDVLD-------------------ARENG-------WFIADVTREELIALREEAGEL----AGGGGKAKTAVATLPPALEA------MAVTAFGRSGARDPARLFTRLSCWLVPCPEAHLLLLDWVWAGGRPSNV---LGAMVDCCANGDLLSARRLAFAQMIVSAQARGPAGGGSDEPVLVARRNDVAIDGVRKAFNAPEIDRVNLLYGGLHAPGLVKCARDKLDMDVVDVEWRDAW----------RVRPPANASP-------------------------------LRYAIIPLLLG------IDGTDWAQTL----HDAVVLGP------RAGVLSVFLYIVRHGALYYALGKWLLEWNRQLF 440 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1050.705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1050.705.1 >prot_S-firma_F_contig1050.705.1 ID=prot_S-firma_F_contig1050.705.1|Name=mRNA_S-firma_F_contig1050.705.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=570bp MTSPLYAAMARPPRRRPPLHACFIAVLVLGACAALSALPTGSSAFHLASFback to top mRNA from alignment at S-firma_F_contig1050:16297..23513- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1050.705.1 ID=mRNA_S-firma_F_contig1050.705.1|Name=mRNA_S-firma_F_contig1050.705.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=7217bp|location=Sequence derived from alignment at S-firma_F_contig1050:16297..23513- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1050:16297..23513- >mRNA_S-firma_F_contig1050.705.1 ID=mRNA_S-firma_F_contig1050.705.1|Name=mRNA_S-firma_F_contig1050.705.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3420bp|location=Sequence derived from alignment at S-firma_F_contig1050:16297..23513- (Sphaerotrichia firma ET2_F female)back to top |