mRNA_S-firma_F_contig1048.671.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 256 bits (654), Expect = 1.940e-73 Identity = 211/494 (42.71%), Postives = 251/494 (50.81%), Query Frame = 2
Query: 2 EHAAADGNMGLFTRLLDAGADGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKEGAKHEVNVLFNEKDPFDEDGESGPTSALHVAAEQGADGVSKALMVAGADPDQLDRHNETPLHAAARCGHRLVLDNLILKGAKLDATNHDWPEXXXXXXXXXXXXXXXXXXXXXGADKNSLDGLGRTPLSTAARRGHLKVVQELMAAGADLDIRDNDHASRSAXXXXXXXXXXXXXXXXXXXXXX-VHACDAEGRTALH-------KVDDGAELIVPVLLEAGADIEAKCTKGL--TPLLHAAREGWTGQVAMRPLLEGGANIDACDNRGSTALHAACENSSADGVELLLQWGADETKVDEGGDTPLEVVGKWEAD-IDDSDLDXXXXXRKANDQGIRQMLARAPADRSWRRRGWLVLCRSHPARVQLVTDADNGSS-------------GRSAKVVKASVED--------AGDEAIDLGRLVERVVRLDADGLFRLVVSFL 1387
EHAAA+GN+ FTRL+DAGA+ GWRGC GRTLLGAAA+G+ EKMV + L GA +VNVLF G +ALM+ GADP+ DR +PLH AA GH V+ L+L A + A +XXXXXXXXXXXX GA+ HL+ VQEL+AAGA+ +R N SRS V A D G ALH V D + V VLL AGAD+ AK TK T L A +R LLEGGANI+A T LH AC SSA GVELLL+WGAD+ G TP VV + D +DD +L+ A++Q IR+MLAR PA RSWRRRGWLVL RS P RVQ+ NGSS G SAKV K S E A D +DL LV R++ L+ADG+FRLVV FL
Sbjct: 43 EHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFG--------------------------GEREALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTAS--QXXXXXXXXXXXXALCISELLLGANS------------------HLEAVQELLAAGANYSLRTN--GSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDA-VRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELE-------ADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIA----NGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 234 bits (598), Expect = 4.930e-65 Identity = 214/520 (41.15%), Postives = 258/520 (49.62%), Query Frame = 2
Query: 2 EHAAADGNMGLFTRLLDAGADGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKEGAKHEVNVLFNEKDPFDEDGESGPTSALHVAAEQGADGVSKALMVAGADPDQLDRHNETPLHAAARCGHRLVLDNLILKGAKLDATNHDWPEXXXXXXXXXXXXXXXXXXXXX------------------------------------GADKNSLDGLGRTPLSTAARRGHLKVVQELMAAGADLDIRDNDHASRSAXXXXXXXXXXXXXXXXXXXXXXVHACDAEGRTALHKVDDGAELI------VPVLLEAGADIEAKCTKG--LTPLLHAAREGWTGQVAMRPLLEGGANIDACDNRGSTALHAACENSSADGVELLLQWGADETKVDEGGDTPLEVVGKWEA-DIDDSDLDXXXXXRKANDQGIRQMLARAPADRSWRRRGWLVLCRSHPARVQLVTDADNGSS-----GRSAKVVKASV-------EDAGDEA-IDLGRLVERVVRLDADGLFRLVVSFL 1387
EHAAA+GN+ LFTRL+DAGA+ GWRGC+GRTLLGAAA G+ EKM+ +LL GA +VNVLF GES SALHVAA +GAD +ALM+AGADP+ DR +P XXXXXXXXXXXXXXXXXXXXX G +G +PL AA RGH V++ L LD R ++ V + G ALH V E + V VLL AGAD+ K T TPL A T + LLEGGANI+A T LH AC VELLL+WGADE + GDTP +VVG E D+DD + R+A++Q I +MLARAPADRSWRRRGWLVL RS P RV + + + SS G SAKV + S E+ D+ +DL LV R+V L+A+GLFRLVV FL
Sbjct: 43 EHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFG--------GES--ESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKAL------LDKRSSE----------------------------VDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEE-------READNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 216 bits (549), Expect = 2.070e-57 Identity = 204/484 (42.15%), Postives = 255/484 (52.69%), Query Frame = 2
Query: 2 EHAAADGNMGLFTRLLDAGADGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKE-GAKHEVNVLFNEKDPFDEDGESGPTSALHVAAEQGADGVSKALMVAGADPDQLDRHNETPLHAAARCGHRLVLDNLILKGAKLDA---TNHDWPEXXXXXXXXXXXXXXXXXXXXXGADKNSLDGLGRTPLSTAARRGHLKVVQELMAAGADLDIRDNDHASRSAXXXXXXXXXXXXXXXXXXXXXXVHACDAEGRTALHKVDDGAELIVPVLLEAGADIEAKCTKGL-------TPLLHAAREGWTGQVAMRPLLEGGANIDACDNRGSTALHAACENSSADGVELLLQWGADETKVDEGGDTPLEVVGKWEADI----DDSDLDXXXXXRKANDQGIRQMLARAPADRSWRRRGWLVLCRSHPARVQLVTDADNGSSGRS-AKVVKASVEDAG-------DEA-IDLGRLVERVVRLDADGLFRLVVS 1381
EHAAA+GN+ LFTRL+DAGADGS GWRGC+GRTLLGAAAYGK+E++V LL E GA +VNV F ++ SALHVAA + +S+ L++AGADP+ LD +PLH AA GH VL L+ KG + DA T XXXXXXXXXXX GAD + D XXXXXXXXXXXXXXXXXXXXXX D + TALH G+ ++ TPL + +A T LH AC S+A V+LLL+WGAD+T VD G+T + VG W+ ++ DD +D KA+ Q R +LA AP DR WRRRGWLVLCRS+P +VQ++ D+ + SSG S AK + S ED+G DEA I+LGRLV +V L AD +FR+VV+
Sbjct: 94 EHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDR----------LESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLLRKG-RADANKTTXXXXXXXXXXXXXXXXXTSCVSKLLLYGADTDCGDRFENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWN-DEDWATALHCAAQGSRPLLEXXXXXXXXXXXXXXXXXXXXECVWTPLHRGVYSRLSSLDTXXXXXXXXXXXNAQAENTWTPLHYACYKSNAAAVDLLLRWGADDTIVDGEGETAADEVGTWDPEVHSNEDDGSIDDDKL--KADGQRTRLILACAPVDRLWRRRGWLVLCRSYPTKVQILKDSSSSSSGCSTAKAARVSEEDSGECGDEDGDEARIELGRLVGHIVGLQADVVFRMVVA 563
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 212 bits (539), Expect = 8.890e-57 Identity = 218/486 (44.86%), Postives = 263/486 (54.12%), Query Frame = 2
Query: 2 EHAAADGNMGLFTRLLDAGA-DGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKEGAKHEVNVLFNEKDPFDEDGESGPTSALHVAAEQGADGVSKALMVAGADPDQLDRHNETPLHAAARCGHRLVLDNLILKGAKLDATNHDWPEXXXXXXXXXXXXXXXXXXXXXGADKNSLDGLGRTPLSTAARRGHLKVVQELMAAGADLDIRDNDHASRSAXXXXXXXXXXXXXXXXXXXXXXVHACDAEGRTALH-------KVDDGAELIVPVLLEAGADIEAKCTKGL---TPLLHAAREGWTGQVAMRPLLEGGANIDACDNRGSTALHAACENSSADGVELLLQWGADETKVDEGGDTPLEVVGKWE-ADIDDSDLDXXXXXRKANDQGIRQMLARAPADRSWRRRGWLVLCRSHPARVQLVTDADNGS----SGRSAKVVKASVED-AGDE-------AIDLGRLVERVVRLDADGLFRLVVSFL 1387
EHAAA GN+ LFTRL+DAG G GWRGC GRTLLGAAA+GK +K+V +LL+ GA +VNVLF G G SALHVAA +GA+ SKALMVAGADP+ D XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX V D +G TA+H +D+GA +V +LLEAG + A+ + TPL A LLEGGAN +A + T LH AC +S+ VELLL+WGADET ++ GD P +V+G ++ D++D D+ KA+ + IR+MLARAPADRSWRRRGWLVL RS P RVQ+ A+ GS + AKV + S ED GDE +D G LV ++ L+ADGLFRLVV FL
Sbjct: 44 EHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLF---------GPEGK-SALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPLDNGA--VVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDV-------KADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQI---ANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 209 bits (531), Expect = 2.680e-55 Identity = 203/490 (41.43%), Postives = 242/490 (49.39%), Query Frame = 2
Query: 2 EHAAADGNMGLFTRLLDAGADGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKEGAKHEVNVLFNEKDPFDEDGESGPTSALHVAAEQGADGVSKALMVAGADPDQLDRHNETPLHAAARCGHRLVLDNLILKGAKLDATNHDWPEXXXXXXXXXXXXXXXXXXXXXGADKNSLDGLGRTPLSTAARRGHLKVVQELMAAGADLDIRDNDHASRSAXXXXXXXXXXXXXXXXXXXXXXVHACDAEGRTALHKV--------DDGAELIVPVLLEAGADIEAKCTKG---LTPLLHAAREGWTGQVAMRPLLEGGANIDACDNRGSTALHAACENSSADGVELLLQWGADETKVDEGGDTPLEVVG-KWEADIDDSDLDXXXXXRKANDQGIRQMLARAPADRSWRRRGWLVLCRSHPARVQLVTDADNGSS--------GRSAKVVKASVEDAG--------DEAIDLGRLVERVVRLDADGLFRLVVSFL 1387
EHAAA GN+GLFTRL+DAGA GWRGC GRTLLGAAA K++K++ +LL GAK +VNVLF K SALH+AA +GA+ SKALM+AGA+P+ R XXXXXXXXXXXXXXXXXXXXX XXXXXXXXX V+A D G TALH D G V VLL AGAD+ AK T PL A +R LLEGGA+++ D T LH AC SS VELLL+WGADE D+G TP +++G + D D++ A+ Q I QMLARAPADRSWRRR WLVL RS P RV++ + +GSS G S K+ + S ED+G +DL LV R+V L+ADGLFRLVV FL
Sbjct: 45 EHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAK----------RESALHLAAARGAEEASKALMIAGANPNL--RGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDA--VRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIE-------ADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 214 bits (544), Expect = 3.340e-54 Identity = 187/498 (37.55%), Postives = 246/498 (49.40%), Query Frame = 2
Query: 2 EHAAADGNMGLFTRLLDAGADGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKEGAKHEVNVLFNEKDPFDEDGESGPTSALHVAAEQGADGVSKALMVAGADPDQLDRHNETPLHAAARCGHRLVLDNLILKGAKLDATNHDWPEXXXXXXXXXXXXXXXXXXXXXGA-----DKNSLDGLGR-----TPLSTAARR--------------GHLKVVQELMAAGADLDIRDNDHASRSAXXXXXXXXXXXXXXXXXXXXXXVHACDAEGRTALHKVDDGAELIVPVLLEAGADIEAKCTKG---LTPLLHAAREGWTGQVAMRPLLEGGANIDACDNRGSTALHAACENSSADGVELLLQWGADETKVDEGGDTPLEVVGKWEAD-IDDSDLDXXXXXRKANDQGIRQMLARAPADRSWRRRGWLVLCRSHPARVQLVTDADNGSSGR-SAKVVKASVEDAG--DEA-----IDLGRLVERVVRLDADGLFRLVVSFL 1387
EHAAA GN+ LFTRL+DAG+ G PGWRGC GRTLLGA AYG+ EKMV +LL+ G ++ NV F+ + SALHVAA + DP+ LH AA GH V+ L+LKGA +DA + XXXXXXXXXXXXXXXXX GA +++ + GR P+ T R GH +V+ + G D+D D+ + T LH+ D +V VLLEAGAD+ AK + TPL A + +R T LH AC S+A V+LLL WGAD T + G P +V+ + D +DD ++ A+ + +R+MLARAPAD+SWRR GWLVL RS P RVQ+ +GSS S K+ + S +D+ DE +D L++R+V L+ADGLFRL+V FL
Sbjct: 43 EHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGK----------SALHVAAAR--------------DPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGWSSLPNAVCCGHATIVKAFLETGIDVDTTDD-----------------------------------QAYTVLHRAADMDGCVVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIE-------ADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGSSNSCSTKLARVSGKDSSRDDELENQMMVDWRVLLDRLVGLEADGLFRLMVGFL 474
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 190 bits (482), Expect = 1.550e-48 Identity = 164/519 (31.60%), Postives = 233/519 (44.89%), Query Frame = 2
Query: 2 EHAAADGNMGLFTRLLDAGADGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKEGAKHEVNVLFNEKDPFDEDGESGPTSALHVAAEQGADGVSKALMVAGADPDQLDRHNE-TPLHAAARCGHRLVLDNLILKGAKLDATNHDWPEXXXXXXXXXXXXXXXXXXXXXGADKNSLDGLGRTPLSTAARRGHLKVVQELMAAGADLDIRD--NDHASRSAXXXXXXXXXXXXXXXXXXXXXXVHACDAEGRTALHKVDDGAELIVPVLLEAGADIEAKCTK---GLTPLLHAAREGWTGQVAMRPLLEGGANIDACDNRGSTALHAACENSSADG---VELLLQWGADETKVDEGGDTPLEVVGKWEADIDDSDLDXXXXXRKA-------------NDQGIRQMLARAPADRSWRRRGWLVLCRSHPARVQLVTDADNGSS-----------------GRSAKVVKASVEDAGD------------------EAIDLGRLVERVVRLDADGLFRLVVSFL 1387
EHAAA GN+GL RLL+AGA+G GWRGC GRT+L AAA G + +V +LL G +VNV+ S SALHVA+ G + +K L++AGAD +++D + LH A H ++D L++ GA ++ D ++LD G +PL A+ GH V+ L+ AGAD+++R H +A V A D G TALH GA+ V VLL+AGAD+ AK G TPL + V LL+ G N++ + G +ALH C + S V+LLL+WGA ET V++ G TP +++ A+ D + Q R +LARAPADR+WRRR WLV+ R+ R + + +GS G ++KV K G+ A G LV +V L+++ +FR +V FL
Sbjct: 39 EHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSL----------SSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHAR-GAQA-VDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVA--LLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEAATGRNLPRHEEADGDNSKVGKTDAGAVGEGSGPTDGERGRDGRATRGAAAGEGGLVPALVGLESEEVFRTIVCFL 543
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 170 bits (430), Expect = 7.190e-42 Identity = 153/496 (30.85%), Postives = 228/496 (45.97%), Query Frame = 2
Query: 2 EHAAADGNMGLFTRLLDAGADGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKEGAKHEVNVLFNEKDPFDEDGESGPTSALHVAAEQGADGVSKALMVAGADPDQLDRHNET-PLHAAARCGHRLVLDNLILKGAKLDA-TNHDWPEXXXXXXXXXXXXXXXXXXXXXGADKNSLDGLGRTPLSTAA--RRGHLKVVQELMAAGADLDIRDNDHASRSAXXXXXXXXXXXXXXXXXXXXXXVHACDAEGRTALHKVDDGAELIVPVLLEAGADIEAKCT--KGLTPLLHAAREGWTGQVAMRPLLEGGANIDACDNRGSTALHAACE---NSSADGVELLLQWGADETKVDEGGDTPLEVVGKWEADIDDS----DLDXXXXXRKANDQGIRQMLARAPADRSWRRRGWLVLCRS--------HPARVQ-----------LVTDADNGSSGRSAKVVKASVEDAGDEAI--DLGRLVERVVRLDADGLFRLVVSFL 1387
EHAAA GN+ L RLL AG DG GWRGC GR+LL AAA G + ++ +LL+ G +VNV+ + S SAL+ + + ++ L++AGAD + +DR ++ PL AA + G ++ NL++ GA + H + A K L LS+ + + GH+ V+ L+AAGAD DIRD D S SA V+ + + + VLL+AGADI+ KC+ G T L AA G A+ LL GAN+ + GSTALH E ++ D V++LL+ GA E VD G P+++ + + + D + R ++LARAPADR+WRRR WL++ R H R + L+ D G S + ++ G A+ DL LV +V L++DG+FR ++ ++
Sbjct: 37 EHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVAS----------STGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHA----------------AAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLD--SHSALVFAAQYERIDVMKALLEHGVDVNVGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETG--NNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELERAI------ELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRRKGKKVGNGEGLLLGDGKRGGSNNVRRSGRSRGRGGGRAAVEVDLRGLVSVLVCLESDGVFRTILGYI 496
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 162 bits (410), Expect = 2.970e-39 Identity = 177/477 (37.11%), Postives = 232/477 (48.64%), Query Frame = 2
Query: 2 EHAAADGNMGLFTRLLDAGADGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKEGAKHEVNVLFNEKDPFDEDGESGPTSALHVAAEQGADGVSKALMVAGADPDQLDRHNE-TPLHAAARCGHRLVLDNLILKGAKLDATNHDWPEXXXXXXXXXXXXXXXXXXXXXGADKNSLDGLGRT----PLSTAARRGHLKVVQELMAAGADLDIRDNDHASRSAXXXXXXXXXXXXXXXXXXXXXXVHACDAEGRTALHKV---DDGAELIVPVLLEAGADIEAKCTKGLTPLLHAAREGWTGQVAMRPLLEGGANI-DACDNRGSTALHAAC---ENSSADGVELLLQWGADETKVDEGGDTPLEVVGKWEADIDDSDLDXXXXXRKANDQGIRQMLARAPADRSWRRRGWLVLCRSHPARVQLVTDADNGSSGRSAKVVKASVEDAG---DEAIDLGRLVERVVRLDADGLFRLVVSFL 1387
EHAA+ GN+ L RLL AGAD GWRGC RTLL AA A +VN + S SAL+ A G + +K L++AG+D + D + + L A + H +D+L++ GA+ + + D AD N GLG+T PL A RRGHL +V+ L+ AGAD +R + S XXXXXXXXXXXXXXXXXXXXXXV A D G TALH D A V +L++A AD E K G TPL AA VA LL+ A++ + D G T LH AC A ++LLL+WGADET ++ G TPL+V+G D D R +L RAP DR WRRRGWLV+ RS + + G+S + +A G D A + +VE + L+ + +FR V+ FL
Sbjct: 39 EHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLDAAXXXXXXXXXXXXXXXXAGADVNKVTV----------SSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGARPNIRD-DCGMAPLQAAALFAEEGVVSALLLAKADVNV--GLGKTMYETPLMLAVRRGHLAIVETLLEAGADCSLRQLE--DYSXXXXXXXXXXXXXXXXXXXXXXXVDAQDRAGCTALHTAILFSDRAGPAVHMLVKARADTELKSVGGWTPLHAAAEHHRVNCVAA--LLQNNASVRNRFDATGDTPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPDEVDRARL--------LLVRAPTDRRWRRRGWLVVLRSRT--IVVAHRCAKGASDSGLSLCQARRNGKGARIDVAGNSSGVVELLTELEPEAVFRSVLGFL 488
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 152 bits (383), Expect = 9.990e-38 Identity = 112/258 (43.41%), Postives = 140/258 (54.26%), Query Frame = 2
Query: 713 VHACDAEGRTALH---------KVDDGAELIVPVLLEAGADIEAKCTKG---LTPLLHAAREGWTGQVAMRPLLEGGANIDACDNRGSTALHAACENSSADGVELLLQWGADETKVDEGGDTPLEVVGKWEADIDDSDLDXXXXXR------KANDQGIRQMLARAPADRSWRRRGWLVLCRSHPARVQLV-----TDADNGSSGR--SAKVVKASVEDAGDE--------AIDLGRLVERVVRLDADGLFRLVVSFL 1387
VHA D G TALH +D+G V VLLEAGAD++AK T TPL +A A+R LLEGGAN++A D T LH AC SS +GVE LL WGADE D G+TP + E + D R +A+ IRQMLARAPADRSW RR WLVL RS P +VQ+ ++ +GSSG SA++V + +D G + ++ LV R+V L+AD LFRLVV FL
Sbjct: 12 VHATDDGGYTALHCCVCDINEPVLDNGDT--VRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSGSSGDGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1048.671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1048.671.1 >prot_S-firma_F_contig1048.671.1 ID=prot_S-firma_F_contig1048.671.1|Name=mRNA_S-firma_F_contig1048.671.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=455bp MGLFTRLLDAGADGSPGWRGCYGRTLLGAAAYGKDEKMVLSLLKEGAKHEback to top mRNA from alignment at S-firma_F_contig1048:2..4769+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1048.671.1 ID=mRNA_S-firma_F_contig1048.671.1|Name=mRNA_S-firma_F_contig1048.671.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4768bp|location=Sequence derived from alignment at S-firma_F_contig1048:2..4769+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1048:2..4769+ >mRNA_S-firma_F_contig1048.671.1 ID=mRNA_S-firma_F_contig1048.671.1|Name=mRNA_S-firma_F_contig1048.671.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2730bp|location=Sequence derived from alignment at S-firma_F_contig1048:2..4769+ (Sphaerotrichia firma ET2_F female)back to top |