mRNA_S-firma_F_contig10442.628.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10442.628.1
Unique NamemRNA_S-firma_F_contig10442.628.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: L1JAR7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JAR7_GUITC)

HSP 1 Score: 293 bits (749), Expect = 4.200e-86
Identity = 213/615 (34.63%), Postives = 305/615 (49.59%), Query Frame = 1
Query:   22 ALLEDLLPPASSSCTPPTASQTSWTTEFPGASST--WWEPYQGLEADVFAGQLRHDNPDTSKSWQLRFGRGGTIYSFRGVFGESVPPQVHNDAPWIDEVWQMVAVEQTLNAI-SPYFIHQAGVYSNEDDLKERPFWSPLVTSHCGDGECLFAAWGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDAEHLLTYHNVPWGGVRWSNFGEVAAASSDGTSLDPIAYEGWGVASSNNVRNLDTVGGFMAFTQ-------SNTPPPA-----FAIPTDSSGV---TPTLVMSGAQCSQSQGHTDN-VGTPVFQFSIASTVTVSDGTGY--GTELVL-HSSRGGNLTVIGVHHWAWAGNLFMFYPKTATVDECNDVFQTGDTITVTPVVGPETWVAPNPRTALSFVVGRDSPEEFEGVDGWEQNSYYRARDCRYRLGSAGSDPEGKSIRDYFVWTVNSFHNLRQGNAFYFRQYMVVGEEDHVVSKSRERTNQTRQGFVTDFEAVGQPGRAVVVYAHPGGQVATVFPGTPEATAAATVCSLQCSGTTTPRASSRILFAIRCGNHTRLSHDPYVFDEDADETAA--RGWHCDVDGGVSRPEMRLLGFFPTGSC 1794
            A+L+D+L  +S  CT      TS+  +F  + +T  W       E DVF  ++ HD+ + ++SW+LRFG+GG IYSF G +GESVPPQ HN APW DEVWQ VAV    N   +PY+IHQAG Y  +D+L E PF SP +   C D +C F +WGQQAH+PT +RS   Y TR++DCG+GV+E  W  ++  +    H   Y+NVPWGGVR S   ++  +S D               ++  +RNLD   G+  FTQ       SN   P        +P   +G    T  LV S A C+  +      +G P+    I STVT+S G  Y  G  LV  + S G ++ V GV  WAW G   +F+ +   +DE N  + TG+++    VV       P    AL+ V G  S    E    W  N   R +  R R G+          RDY V+TV +F  +R G  + FRQY +    + +  K+    NQT Q F   + A  + GR + + +                 +        C+G++TP    + LFAI+CG+ + +  DPY     A+ ++   + + C    G+ RP  RLLG+F  G+C
Sbjct:   31 AILDDMLGSSSPLCTGSGLGSTSFNYKFTSSENTSRWASMNSKYEKDVFLAEMSHDDENPNRSWRLRFGKGGNIYSFVGAYGESVPPQYHNLAPWNDEVWQAVAVSLNYNQPQTPYYIHQAGDYL-KDNL-ETPFTSPTLAKSCKDNQCSFLSWGQQAHIPTSWRSSAFYYTRYKDCGEGVLEVEWSIHNVASLPEGHNFQYYNVPWGGVRTSALTKMLISSKDAGGYTGFQTTPPYSDTTQTIRNLDVTLGYTTFTQKQVKELESNFTMPCGNAAGSEVPCPQTGAEDQTLRLVKS-ASCTLMEAEAQRQLGLPLTSCPIESTVTISTGCEYHKGCSLVFTNPSNGFSMPVQGVSSWAWKGTKILFWTQVP-LDEVNANWATGESL----VVSYSPAEDPKKNLALTLVHGVGS----EHGQSWTLN---RPK-ARLRYGATNV------ARDYTVFTVEAFSVIRPGQTYAFRQYFISDAFEGMQGKASRWVNQTSQRF---YSAGTRAGRDIFLCSCDNRTFGATLQECDNEKSVKV-----CAGSSTPGTGRKPLFAIQCGDISYVGSDPYSLAPWAENSSGYWKPYICASRPGL-RPTWRLLGYFAEGAC 614          
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: K0RAX0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAX0_THAOC)

HSP 1 Score: 229 bits (584), Expect = 9.900e-61
Identity = 197/665 (29.62%), Postives = 285/665 (42.86%), Query Frame = 1
Query:   49 ASSSCTPPTASQTSWTTEFPGAS---STWWEPYQGLEADVFAGQLRHDNPDTSKSWQLRFGRGGTIYSFRG--VFGESVPPQVHNDAPWIDEVWQMVAVEQTLNAISP----YFIHQAGVYSNEDDLKERPFWSPLVTSHCGDGECLFAAWGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDAEHLL--TYHNVPWGGVRWSNFG-EVAAASSDGTSLDPIAYEG-----------WGVASSN--NVRNLDTVGGFMAFTQSNTPPPAFAIPTDSSGV-----TPTLVMSGAQCSQ----SQGHTDNVGTPVFQFSIASTV------TVSDGTGYGTELV-----------LHSSRGGNLTVIGVHHWAWAGN-----LFMFYPKTATVDECNDVF--QTGDTI-----------TVTPVVGPETWVAPNPRTALSFVVGRDSPEEFEGVDGWEQNSYYRARDCRYRLGSAGSDPEGKSIRDYFVWTVNSF--HNLRQGNAFYFRQYMVVGEEDHVVSKSRERTNQTRQGFVTDFEAVGQPGRAVVVYAHPG---GQVATVFPGTPEATAAATVCSLQCSGTTTPRASSRILFAIRCGNHTRLSHDPYVFDEDADET---------AARGWHCDVDGGVSRPEMRLLGFFPTGSC 1794
            AS+  T  TAS TS+T  +PG+S   S W+ P+ G E D+F   + HD+    +SW +R G GG +YS     + GES+ PQ H DAPWIDEV Q VAV   LN  +P    YF HQAG Y  +      PF+SP    HC    C FA+WG QAHVPTP+ +P++++TR+ +CG GVIE     ++F +  +   +   Y NV WGGVR S     + A+SS+G+S D + +             W V+ S+   + NLD   G+     ++T   +  + T+  G      T   V SG+        S G T N  +  F ++            + D TG+G                    G  L V  V HW W        L ++    AT     + F   T DT+           T +P  G    V     +A ++V GR   E++  +              R R G+        S RDY V+TVN      L+ G  +  R +    E   V +   +   +    ++   + V    R V +Y          A+V  G+  ++  +   ++ CSG +TP+A     F I CG +T +  DPY F      T           R + CD      RP  +LLGFF  G C
Sbjct:  189 ASTCITADTASSTSFTFNWPGSSDPTSKWYPPHVGFEEDLFQAAMSHDDGSGRRSWTIRIGTGGNMYSHYAPDLHGESMAPQAHGDAPWIDEVQQQVAVNNNLNNQAPWNRPYFHHQAGAYQRDGSYTTVPFYSPSFARHCAGNTCTFASWGTQAHVPTPFTAPVMFITRYTNCGSGVIELTQAMHNFADVASGTTVDQNYFNVGWGGVRASRLPFALEASSSEGSSTDSLDFANPDYVDTMGQCPWQVSHSSPGQMTNLDQTPGYTGKPDNST---SQVVNTNVGGCMVTSCTDAQVSSGSHTRVALRVSPGSTPNCSSHSFTYTREGVTYPGMRCDLRD-TGFGRNFANSCEPWARFGFKRMDTGAVLEVAYVKHWTWNSGDEDTFLAIYEEDAATARSTFNSFFDNTADTVNNLDIEVVLMTTTSPPAGYNPGVT---ESAFTYVYGRG--EDYSQLPSPNAGDGSVTGTSRRRWGT--------SDRDYTVFTVNWLGQSRLKPGQTYINRSFQFASELGAVEALGEDLREKV---YIDQVDEVDYNARRVDLYKDGDKFEAVAASVVGGS--SSCGSETATVSCSGWSTPQAGKSPFFYITCGANTHVGQDPYHFSPSFGGTFPGHAPVGGTVRSYVCDGQPNTVRPTWKLLGFFSPGDC 831          
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: A0A7R9WE00_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WE00_9STRA)

HSP 1 Score: 186 bits (471), Expect = 2.690e-51
Identity = 98/237 (41.35%), Postives = 139/237 (58.65%), Query Frame = 1
Query:  118 STWWEPYQGLEADVFAGQLRHDNPD-TSKSWQLRFGRGGTIYSFRGVFGESVPPQVHNDAPWIDEVWQMVAVEQTLNAISP---YFIHQAGVYSNEDDLKERPFWSPLVTSHCGDGECLFAAWGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDAEHLLTYHNVPWGGVRWSNFGEVAAASSDGTSLD---PIAYEGWGVASSNNVRNLDTVGGFMAFTQSNTPPPA 807
            S W E  +  E  VF  ++RH++P   +++W  R G GG +YS  G FGE++PPQ +  +P++DEV Q VAV+   N  S    YFIHQAG Y  +++    PF+SP V   C   EC F+++GQQ HVPT ++S +L+  R+RDCG+GV+E      +  + D   +LTY NVPWGGVR S+  E   +  DG  L+   P+   G G      + NL+T+GGF  F  +N P PA
Sbjct:    3 SRWSEANKEWEELVFLAEMRHEDPSGKNRTWTARIGTGGDVYSLFGPFGEAIPPQTNPRSPFVDEVTQCVAVDAARNRPSEGRSYFIHQAGAYLGDEEYMPPPFFSPNVAKSCAGNECRFSSFGQQGHVPTVFKSSLLFFHRYRDCGNGVLEYTQGFQNVGDADTGDVLTYLNVPWGGVRTSSLPEFVLSGQDGRMLEKELPLQRFGGG----KKIPNLNTMGGFTTFA-TNLPTPA 234          
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: K0S893_THAOC (Methyltrans_SAM domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S893_THAOC)

HSP 1 Score: 193 bits (491), Expect = 1.470e-48
Identity = 108/272 (39.71%), Postives = 153/272 (56.25%), Query Frame = 1
Query:    1 TTPSLSKALLEDLLPP-----ASSSCTPPTASQTSWTTEFPGAS---STWWEPYQGLEADVFAGQLRHDNPDTSKSWQLRFGRGGTIYSFRG--VFGESVPPQVHNDAPWIDEVWQMVAVEQTLNAISP----YFIHQAGVYSNEDDLKERPFWSPLVTSHCGDGECLFAAWGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDAEHLL--TYHNVPWGGVRWSNFG-EVAAASSDGTSLDPIAYEGWGVASSNNVRNLDTVG 765
            +T S+ +A+L D++       AS+  T  TAS TS+T ++PG+S   S W+  + G E D+F   + HD+    +SW +R G GG +YS     + GES+ PQ H DAPWIDEV Q VAV   LN  +P    YF HQAG Y  +      PF+SP    HC    C FA+WG QAHVPTP+ +P++++TR+ +CG GVIE     ++F +  ++  +  TY N  WGGVR S     + A SS+G+S D   +         N  N+D +G
Sbjct: 1614 STMSVDEAILSDIMTSFVGHEASTCITADTASSTSFTFDWPGSSDPTSEWYPAHVGFEEDLFQAAMSHDDGSGRRSWTIRIGTGGNMYSHYAPDLHGESMAPQAHGDAPWIDEVQQQVAVNNNLNRKAPWNRPYFQHQAGAYQRDGSYTTVPFYSPSFARHCAGNTCTFASWGTQAHVPTPFTAPVMFITRYTNCGSGVIELTQAMHNFADVASDTTVDQTYFNTGWGGVRSSRLPFALEANSSEGSSTDSFDFA--------NPDNVDAMG 1877          
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: A0A7S2PN34_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PN34_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.510e-42
Identity = 68/145 (46.90%), Postives = 93/145 (64.14%), Query Frame = 1
Query:  124 WWEPYQGLEADVFAGQLRHDNPDTSKSWQLRFGRGGTIYSFRGVFGESVPPQVHNDAPWIDEVWQMVAVEQTLNA--ISPYFIHQAGVYSNEDDLKERPFWSPLVTSHCGDGECLFAAWGQQAHVPTPYRSPMLYLTRFRDCGDG 552
            W    +  E  +F  +L H++ D+++ W +R G G  IYSF G FGES+PPQ H +APWIDEVWQ VAV   L+   ++ YFIHQAG Y  +    ++PF+SP V   C   EC FA+WGQ  HVPT + S ++Y  +++DCGDG
Sbjct:   23 WHRDSRPFEEQLFLAELSHEDDDSNREWSIRIGSGSNIYSFVGPFGESIPPQKHPNAPWIDEVWQSVAVNHHLHQPDVNDYFIHQAGSYQRDSPYTDKPFFSPNVAKFCEKRECSFASWGQHGHVPTIFESSLIYHNKYKDCGDG 167          
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: K0T452_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T452_THAOC)

HSP 1 Score: 161 bits (408), Expect = 4.180e-38
Identity = 80/179 (44.69%), Postives = 102/179 (56.98%), Query Frame = 1
Query:  145 LEADVFAGQLRHDNPDTS---KSWQLRFGRGGTIYSFRG--VFGESVPPQVHNDAPWIDEVWQMVAVEQTLNAISP----YFIHQAGVYSNEDDLKERPFWSPLVTSHCGDGECLFAAWGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDAEHL---LTYHNVPWGGVR 645
            LEA  F+    H  P      +SW +R G GG +YS     + GES PPQ H  APW+DEV Q V+V   LN   P    YF+HQAGVY  +    + PFW P +  HCG   C FA+WG  AHVPTP+ SP+L+LTR+ +CG GVIE     ++F + ++        Y NV WGGVR
Sbjct:  255 LEAANFSADSDHTGPSAGGGRRSWTIRIGTGGNMYSHYAPDLHGESFPPQAHPGAPWVDEVQQTVSVNLRLNNRPPHGRPYFVHQAGVYQRDRPYTDVPFWGPSLAGHCGGSSCSFASWGTHAHVPTPFTSPVLFLTRYTNCGRGVIEMTQAVHNFASPESAGPNVDQNYFNVGWGGVR 433          
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: A0A0D7WA00_9FLAO (FTP domain-containing protein n=1 Tax=Tamlana sedimentorum TaxID=1435349 RepID=A0A0D7WA00_9FLAO)

HSP 1 Score: 160 bits (405), Expect = 4.400e-38
Identity = 86/239 (35.98%), Postives = 135/239 (56.49%), Query Frame = 1
Query:   85 TSWTTEFPGASSTWWEPYQGLEADVFAGQLRHDNPDTSKSWQLRFGRGGTIYSFRGVFGESVPPQVHNDAPWIDEVWQMVAVEQTLN---AISPYFIHQAGVYSNEDDLKERPFWSPLVTSHCGDGECLFAA--WGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDAEHLLTYHNVPWGGVRWSNFGEVAAASSDGTSLDPIAYEGWGVASSNNVRNLDTVGGFMAFTQ 786
            TS+TT +  + S W +P    E  V+  +L+H+   +  SW+LR G+GG IYSF+  +GE +PPQ    + W DEVWQ V+V    N     + YFIH AG Y+N  D  E+ ++SPL+ S+    E  ++   WG QAH+P+ Y+S +LY T++R+ G+GV+E  +   +F ++   H+    N PWGGVR SN         DG+    I        ++ + R++D  GGF+ +++
Sbjct:   54 TSFTTNYSPSGSYWLDPTATDEEHVYLAKLQHEATTSENSWELRIGQGGQIYSFKSAYGEGIPPQSKEHSTWNDEVWQPVSVSGLNNRDFTSAFYFIHGAGAYNN--DGIEKTWYSPLMASYYDTTEKSYSVTNWGAQAHIPSLYKSEILYTTKYREIGEGVLEVTYFIKNFGDETMVHI----NAPWGGVRASNLRSKFVGLPDGS----IEISEGNTGTTVDTRDIDETGGFVIWSE 282          
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: UPI001AE57040 (T9SS type A sorting domain-containing protein n=1 Tax=Mariniflexile gromovii TaxID=362523 RepID=UPI001AE57040)

HSP 1 Score: 159 bits (401), Expect = 1.500e-37
Identity = 87/243 (35.80%), Postives = 137/243 (56.38%), Query Frame = 1
Query:   85 TSWTTEFPGASSTWWEPYQGLEADVFAGQLRHDNPDTSKSWQLRFGRGGTIYSFRGVFGESVPPQVHNDAPWIDEVWQMVAVEQTLN----AISPYFIHQAGVYSNEDDLKERPFWSPLVTSHCGDGECLFAA--WGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDAEHLLTYHNVPWGGVRWSNFGEVAAASSDGTSLDPIAYEGWGVASSNNVRNLDTVGGFMAFTQSNT 795
            T++TT +  + S W +P +  E  V+  +L H       SWQLR G+GG IYSF+  +GE +PPQ    + W DEVWQ V+V  TLN      + YFIH AG Y+N  D  E+ ++SPL+ S+    +  +A   WG QAH+P+ Y+S +LY T++R+ G+GV+E  +   +F ++   H+    N PWGGVR S+         DG+    I        ++ + R++D  GG++ ++++ T
Sbjct:   54 TNFTTSYSPSGSYWLDPTEADEQHVYLAKLEHQASTPENSWQLRIGQGGQIYSFKSAYGEGIPPQSKEHSTWNDEVWQPVSVS-TLNNRDFTSAFYFIHGAGAYNN--DGIEKTWYSPLMASYYDAFDKSYAVTNWGAQAHIPSLYKSEILYTTKYREIGEGVLEVTYFIQNFGDEPMVHI----NAPWGGVRASSLRGKFVGLPDGS----IEISDGNTGTTVDTRDIDETGGYVIWSENTT 285          
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: UPI00111EB82F (T9SS type A sorting domain-containing protein n=1 Tax=Flavicella sediminum TaxID=2585141 RepID=UPI00111EB82F)

HSP 1 Score: 158 bits (400), Expect = 2.020e-37
Identity = 86/239 (35.98%), Postives = 136/239 (56.90%), Query Frame = 1
Query:   85 TSWTTEFPGASSTWWEPYQGLEADVFAGQLRHDNPDTSKSWQLRFGRGGTIYSFRGVFGESVPPQVHNDAPWIDEVWQMVAVEQTLN---AISPYFIHQAGVYSNEDDLKERPFWSPLVTSHCGDGECLFAA--WGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDAEHLLTYHNVPWGGVRWSNFGEVAAASSDGTSLDPIAYEGWGVASSNNVRNLDTVGGFMAFTQ 786
            TS+TT +  + S W +P    EA V+  +L+H       SW+LR G+GG IYSF+  +GE +PPQ    + W DEVWQ V+V    N     + YFIH AG Y+N  D  E+ ++SPL+ S+    +  ++   WG QAH+P+ Y+S +LY T++++ G+G++E  +   +F ++   H+    N PWGGVR S+         DG SL+ I+    G     + R++D  GGF+ +++
Sbjct:   54 TSFTTNYSPSGSYWLDPTAADEAHVYLAKLQHQAATAENSWELRIGQGGQIYSFKSAYGEGIPPQSKEHSTWNDEVWQPVSVSSLNNRDFTSAFYFIHGAGAYNN--DGIEKSWYSPLMASYYNSNKKSYSVTNWGTQAHIPSLYKSEILYTTKYKEIGEGILEVTYSIQNFGDETMVHI----NSPWGGVRSSSLRGKFVGLPDG-SLE-ISEGNTGTNIGTDSRDIDETGGFVIWSK 284          
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Match: UPI00131C202B (T9SS type A sorting domain-containing protein n=1 Tax=Algibacter sp. L3A6 TaxID=2686366 RepID=UPI00131C202B)

HSP 1 Score: 156 bits (394), Expect = 1.580e-36
Identity = 91/257 (35.41%), Postives = 138/257 (53.70%), Query Frame = 1
Query:   85 TSWTTEFPGASSTWWEPYQGLEADVFAGQLRHDNPDTSKSWQLRFGRGGTIYSFRGVFGESVPPQVHNDAPWIDEVWQMVAVEQTLNAIS----------------PYFIHQAGVYSNED-----DLKERPFWSPLVTSHCGDGECLFAA--WGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDAEHLLTYHNVPWGGVRWSNFGEVAAASSDGTSLDPIAYEGWGVASSNNVRNLDTVGGFMAFTQ 786
            T++TT F  + S+W E     E DV+  +L+H + D + +W LR G+GG IYSF G +GE VPP   + + W DEVWQ V+V   LN                    YFIH AG Y  +D     D  ++PF+SPL+ S+    E  +    WG QAHVP+ ++S +LY T+++D G+G++E  ++  +F  D  +HL    NVPWGGVR S+          G  ++ I Y   G  +  ++ ++D  GG++ + Q
Sbjct:   58 TTFTTNFEPSGSSWGETLD--EQDVYLARLKHIS-DANNTWDLRIGKGGQIYSFIGPYGEGVPPSSKSHSQWNDEVWQPVSVSGELNNNDGEDDNVFIEGATNTGLKYFIHGAGTYLTDDAAESIDFLDKPFYSPLMASYYHPTEKAYYVTNWGAQAHVPSLFKSGVLYTTKYKDIGEGILEVTYVIENFGTDVIDHL----NVPWGGVRSSSL-RGKFVGRPGGDIE-IIYGQTGTENPGDLEDIDATGGYVIYAQ 305          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10442.628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L1JAR7_GUITC4.200e-8634.63Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
K0RAX0_THAOC9.900e-6129.62Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7R9WE00_9STRA2.690e-5141.35Hypothetical protein (Fragment) n=2 Tax=Pseudictyo... [more]
K0S893_THAOC1.470e-4839.71Methyltrans_SAM domain-containing protein (Fragmen... [more]
A0A7S2PN34_9STRA1.510e-4246.90Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
K0T452_THAOC4.180e-3844.69Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A0D7WA00_9FLAO4.400e-3835.98FTP domain-containing protein n=1 Tax=Tamlana sedi... [more]
UPI001AE570401.500e-3735.80T9SS type A sorting domain-containing protein n=1 ... [more]
UPI00111EB82F2.020e-3735.98T9SS type A sorting domain-containing protein n=1 ... [more]
UPI00131C202B1.580e-3635.41T9SS type A sorting domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10442contigS-firma_F_contig10442:1586..3517 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog159749.K0S893
PFAMsMethyltrans_SAM
Max annot lvl2836|Bacillariophyta
Evalue2.4e-49
EggNOG OGsCOG1092@1|root,2S365@2759|Eukaryota,2XE3M@2836|Bacillariophyta
DescriptionS-adenosylmethionine-dependent methyltransferase
COG categoryJ
Hectar predicted targeting categoryother localisation
Exons3
Model size1794
Cds size1794
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10442.628.1prot_S-firma_F_contig10442.628.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10442 1586..3517 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815578.556661-CDS-S-firma_F_contig10442:1585..19611622815578.556661-CDS-S-firma_F_contig10442:1585..1961Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10442 1586..1961 +
1696949430.4852357-CDS-S-firma_F_contig10442:1585..19611696949430.4852357-CDS-S-firma_F_contig10442:1585..1961Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10442 1586..1961 +
1622815578.6022303-CDS-S-firma_F_contig10442:2025..25941622815578.6022303-CDS-S-firma_F_contig10442:2025..2594Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10442 2026..2594 +
1696949430.4968994-CDS-S-firma_F_contig10442:2025..25941696949430.4968994-CDS-S-firma_F_contig10442:2025..2594Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10442 2026..2594 +
1622815578.6120553-CDS-S-firma_F_contig10442:2668..35171622815578.6120553-CDS-S-firma_F_contig10442:2668..3517Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10442 2669..3517 +
1696949430.5166776-CDS-S-firma_F_contig10442:2668..35171696949430.5166776-CDS-S-firma_F_contig10442:2668..3517Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10442 2669..3517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10442.628.1

>prot_S-firma_F_contig10442.628.1 ID=prot_S-firma_F_contig10442.628.1|Name=mRNA_S-firma_F_contig10442.628.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=598bp
TTPSLSKALLEDLLPPASSSCTPPTASQTSWTTEFPGASSTWWEPYQGLE
ADVFAGQLRHDNPDTSKSWQLRFGRGGTIYSFRGVFGESVPPQVHNDAPW
IDEVWQMVAVEQTLNAISPYFIHQAGVYSNEDDLKERPFWSPLVTSHCGD
GECLFAAWGQQAHVPTPYRSPMLYLTRFRDCGDGVIESVWMQYHFRNDDA
EHLLTYHNVPWGGVRWSNFGEVAAASSDGTSLDPIAYEGWGVASSNNVRN
LDTVGGFMAFTQSNTPPPAFAIPTDSSGVTPTLVMSGAQCSQSQGHTDNV
GTPVFQFSIASTVTVSDGTGYGTELVLHSSRGGNLTVIGVHHWAWAGNLF
MFYPKTATVDECNDVFQTGDTITVTPVVGPETWVAPNPRTALSFVVGRDS
PEEFEGVDGWEQNSYYRARDCRYRLGSAGSDPEGKSIRDYFVWTVNSFHN
LRQGNAFYFRQYMVVGEEDHVVSKSRERTNQTRQGFVTDFEAVGQPGRAV
VVYAHPGGQVATVFPGTPEATAAATVCSLQCSGTTTPRASSRILFAIRCG
NHTRLSHDPYVFDEDADETAARGWHCDVDGGVSRPEMRLLGFFPTGSC
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mRNA from alignment at S-firma_F_contig10442:1586..3517+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10442.628.1 ID=mRNA_S-firma_F_contig10442.628.1|Name=mRNA_S-firma_F_contig10442.628.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1932bp|location=Sequence derived from alignment at S-firma_F_contig10442:1586..3517+ (Sphaerotrichia firma ET2_F female)
ACAACCCCATCCCTGTCAAAGGCCCTCCTGGAGGACTTGCTGCCCCCCGC CTCCTCCTCCTGCACACCACCCACGGCCTCGCAGACGTCATGGACGACTG AGTTCCCGGGTGCGAGCTCCACCTGGTGGGAGCCGTACCAGGGGCTGGAG GCGGACGTGTTTGCCGGCCAGCTGCGCCACGACAACCCGGACACGTCAAA GTCGTGGCAGCTCCGCTTCGGTCGAGGGGGTACGATTTACAGCTTTCGTG GGGTGTTCGGCGAGTCTGTGCCTCCCCAGGTGCACAACGATGCGCCATGG ATCGACGAGGTGTGGCAGATGGTCGCCGTCGAGCAAACACTGAACGCCAT TTCGCCGTACTTCATCCACCAAGCTGGTGAGCATCCTCACCCCGCCGGCG CTGCCTCCCCATGCTGACCACGTCTTCCTTCCCCACGCAGGTGTGTACAG TAACGAGGACGACCTCAAGGAGCGGCCGTTTTGGTCCCCCCTCGTCACGT CCCACTGTGGCGACGGGGAGTGCCTGTTTGCGGCATGGGGGCAGCAGGCG CACGTCCCCACACCCTACCGGTCCCCCATGCTGTACCTCACACGCTTCCG GGACTGCGGCGATGGGGTCATTGAAAGTGTGTGGATGCAGTACCACTTCC GCAACGACGACGCGGAGCACCTGCTGACGTACCACAACGTGCCGTGGGGC GGCGTGCGGTGGTCGAACTTTGGGGAGGTAGCGGCGGCATCCAGCGATGG GACGTCACTGGACCCCATTGCTTACGAAGGGTGGGGCGTTGCCAGCAGCA ACAACGTCAGGAACTTGGACACCGTGGGTGGCTTCATGGCGTTCACCCAG TCCAACACACCACCCCCCGCGTTCGCCATCCCCACCGACTCCTCTGGCGT CACCCCCACCCTTGTCATGTCAGGGGCCCAGTGCAGCCAGTCTCAGGGGC ACACGGACAACGTGGGGACGCCAGTGTTCCAATTTAGCATTGCTTCGACG GTCACGGTGGTGAGTGTGTTGGTGTGACATGCACAGGGGGGCGTGAAGGG TGACTGATTGCCCCCCCTCCCTCCATCACGCAGTCCGACGGCACCGGGTA CGGCACGGAGCTCGTCCTGCACAGCAGCCGTGGTGGCAACCTCACCGTGA TTGGCGTCCACCACTGGGCATGGGCCGGCAACCTGTTCATGTTCTACCCG AAGACGGCCACCGTGGACGAGTGCAACGACGTGTTCCAAACCGGGGACAC CATCACCGTGACGCCGGTGGTGGGCCCCGAGACGTGGGTGGCCCCCAACC CGCGCACTGCGCTGTCGTTTGTGGTGGGCAGGGACTCCCCGGAGGAGTTT GAGGGCGTCGACGGGTGGGAGCAGAACTCGTACTACCGCGCGCGGGACTG CCGGTACCGCCTAGGATCTGCGGGGTCAGATCCGGAGGGCAAGAGCATCA GGGACTACTTTGTGTGGACGGTGAACTCCTTCCACAACCTGCGGCAGGGG AACGCGTTCTACTTCCGGCAGTACATGGTGGTGGGGGAGGAAGACCACGT GGTGTCCAAGTCCCGGGAGCGTACCAACCAAACCCGGCAAGGGTTTGTGA CGGACTTTGAGGCCGTGGGGCAGCCGGGGCGGGCCGTTGTGGTGTACGCC CACCCCGGCGGCCAGGTGGCGACGGTGTTCCCGGGCACGCCTGAAGCCAC GGCGGCGGCCACCGTGTGCTCCCTGCAGTGCAGTGGGACGACGACACCCC GGGCGTCGTCCCGCATCCTGTTTGCGATCCGGTGCGGGAACCACACCCGG TTGTCGCACGACCCGTACGTGTTTGACGAGGACGCGGACGAGACGGCGGC CCGCGGCTGGCACTGTGACGTCGACGGAGGCGTGTCTCGGCCGGAGATGA GGCTGCTGGGCTTCTTTCCGACGGGCAGCTGC
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Coding sequence (CDS) from alignment at S-firma_F_contig10442:1586..3517+

>mRNA_S-firma_F_contig10442.628.1 ID=mRNA_S-firma_F_contig10442.628.1|Name=mRNA_S-firma_F_contig10442.628.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3588bp|location=Sequence derived from alignment at S-firma_F_contig10442:1586..3517+ (Sphaerotrichia firma ET2_F female)
ACAACCCCATCCCTGTCAAAGGCCCTCCTGGAGGACTTGCTGCCCCCCGC
CTCCTCCTCCTGCACACCACCCACGGCCTCGCAGACGTCATGGACGACTG
AGTTCCCGGGTGCGAGCTCCACCTGGTGGGAGCCGTACCAGGGGCTGGAG
GCGGACGTGTTTGCCGGCCAGCTGCGCCACGACAACCCGGACACGTCAAA
GTCGTGGCAGCTCCGCTTCGGTCGAGGGGGTACGATTTACAGCTTTCGTG
GGGTGTTCGGCGAGTCTGTGCCTCCCCAGGTGCACAACGATGCGCCATGG
ATCGACGAGGTGTGGCAGATGGTCGCCGTCGAGCAAACACTGAACGCCAT
TTCGCCGTACTTCATCCACCAAGCTGACAACCCCATCCCTGTCAAAGGCC
CTCCTGGAGGACTTGCTGCCCCCCGCCTCCTCCTCCTGCACACCACCCAC
GGCCTCGCAGACGTCATGGACGACTGAGTTCCCGGGTGCGAGCTCCACCT
GGTGGGAGCCGTACCAGGGGCTGGAGGCGGACGTGTTTGCCGGCCAGCTG
CGCCACGACAACCCGGACACGTCAAAGTCGTGGCAGCTCCGCTTCGGTCG
AGGGGGTACGATTTACAGCTTTCGTGGGGTGTTCGGCGAGTCTGTGCCTC
CCCAGGTGCACAACGATGCGCCATGGATCGACGAGGTGTGGCAGATGGTC
GCCGTCGAGCAAACACTGAACGCCATTTCGCCGTACTTCATCCACCAAGC
TGGTGTGTACAGTAACGAGGACGACCTCAAGGAGCGGCCGTTTTGGTCCC
CCCTCGTCACGTCCCACTGTGGCGACGGGGAGTGCCTGTTTGCGGCATGG
GGGCAGCAGGCGCACGTCCCCACACCCTACCGGTCCCCCATGCTGTACCT
CACACGCTTCCGGGACTGCGGCGATGGGGTCATTGAAAGTGTGTGGATGC
AGTACCACTTCCGCAACGACGACGCGGAGCACCTGCTGACGTACCACAAC
GTGCCGTGGGGCGGCGTGCGGTGGTCGAACTTTGGGGAGGTAGCGGCGGC
ATCCAGCGATGGGACGTCACTGGACCCCATTGCTTACGAAGGGTGGGGCG
TTGCCAGCAGCAACAACGTCAGGAACTTGGACACCGTGGGTGGCTTCATG
GCGTTCACCCAGTCCAACACACCACCCCCCGCGTTCGCCATCCCCACCGA
CTCCTCTGGCGTCACCCCCACCCTTGTCATGTCAGGGGCCCAGTGCAGCC
AGTCTCAGGGGCACACGGACAACGTGGGGACGCCAGTGTTCCAATTTAGC
ATTGCTTCGACGGTCACGGTGGTGTGTACAGTAACGAGGACGACCTCAAG
GAGCGGCCGTTTTGGTCCCCCCTCGTCACGTCCCACTGTGGCGACGGGGA
GTGCCTGTTTGCGGCATGGGGGCAGCAGGCGCACGTCCCCACACCCTACC
GGTCCCCCATGCTGTACCTCACACGCTTCCGGGACTGCGGCGATGGGGTC
ATTGAAAGTGTGTGGATGCAGTACCACTTCCGCAACGACGACGCGGAGCA
CCTGCTGACGTACCACAACGTGCCGTGGGGCGGCGTGCGGTGGTCGAACT
TTGGGGAGGTAGCGGCGGCATCCAGCGATGGGACGTCACTGGACCCCATT
GCTTACGAAGGGTGGGGCGTTGCCAGCAGCAACAACGTCAGGAACTTGGA
CACCGTGGGTGGCTTCATGGCGTTCACCCAGTCCAACACACCACCCCCCG
CGTTCGCCATCCCCACCGACTCCTCTGGCGTCACCCCCACCCTTGTCATG
TCAGGGGCCCAGTGCAGCCAGTCTCAGGGGCACACGGACAACGTGGGGAC
GCCAGTGTTCCAATTTAGCATTGCTTCGACGGTCACGGTGTCCGACGGCA
CCGGGTACGGCACGGAGCTCGTCCTGCACAGCAGCCGTGGTGGCAACCTC
ACCGTGATTGGCGTCCACCACTGGGCATGGGCCGGCAACCTGTTCATGTT
CTACCCGAAGACGGCCACCGTGGACGAGTGCAACGACGTGTTCCAAACCG
GGGACACCATCACCGTGACGCCGGTGGTGGGCCCCGAGACGTGGGTGGCC
CCCAACCCGCGCACTGCGCTGTCGTTTGTGGTGGGCAGGGACTCCCCGGA
GGAGTTTGAGGGCGTCGACGGGTGGGAGCAGAACTCGTACTACCGCGCGC
GGGACTGCCGGTACCGCCTAGGATCTGCGGGGTCAGATCCGGAGGGCAAG
AGCATCAGGGACTACTTTGTGTGGACGGTGAACTCCTTCCACAACCTGCG
GCAGGGGAACGCGTTCTACTTCCGGCAGTACATGGTGGTGGGGGAGGAAG
ACCACGTGGTGTCCAAGTCCCGGGAGCGTACCAACCAAACCCGGCAAGGG
TTTGTGACGGACTTTGAGGCCGTGGGGCAGCCGGGGCGGGCCGTTGTGGT
GTACGCCCACCCCGGCGGCCAGGTGGCGACGGTGTTCCCGGGCACGCCTG
AAGCCACGGCGGCGGCCACCGTGTGCTCCCTGCAGTGCAGTGGGACGACG
ACACCCCGGGCGTCGTCCCGCATCCTGTTTGCGATCCGGTGCGGGAACCA
CACCCGGTTGTCGCACGACCCGTACGTGTTTGACGAGGACGCGGACGAGA
CGGCGGCCCGCGGCTGGCACTGTGACGTCGACGGAGGCGTGTCTCGGCCG
GAGATGAGGCTGCTGGGCTTCTTTCCGACGGGCAGCTGCTCCGACGGCAC
CGGGTACGGCACGGAGCTCGTCCTGCACAGCAGCCGTGGTGGCAACCTCA
CCGTGATTGGCGTCCACCACTGGGCATGGGCCGGCAACCTGTTCATGTTC
TACCCGAAGACGGCCACCGTGGACGAGTGCAACGACGTGTTCCAAACCGG
GGACACCATCACCGTGACGCCGGTGGTGGGCCCCGAGACGTGGGTGGCCC
CCAACCCGCGCACTGCGCTGTCGTTTGTGGTGGGCAGGGACTCCCCGGAG
GAGTTTGAGGGCGTCGACGGGTGGGAGCAGAACTCGTACTACCGCGCGCG
GGACTGCCGGTACCGCCTAGGATCTGCGGGGTCAGATCCGGAGGGCAAGA
GCATCAGGGACTACTTTGTGTGGACGGTGAACTCCTTCCACAACCTGCGG
CAGGGGAACGCGTTCTACTTCCGGCAGTACATGGTGGTGGGGGAGGAAGA
CCACGTGGTGTCCAAGTCCCGGGAGCGTACCAACCAAACCCGGCAAGGGT
TTGTGACGGACTTTGAGGCCGTGGGGCAGCCGGGGCGGGCCGTTGTGGTG
TACGCCCACCCCGGCGGCCAGGTGGCGACGGTGTTCCCGGGCACGCCTGA
AGCCACGGCGGCGGCCACCGTGTGCTCCCTGCAGTGCAGTGGGACGACGA
CACCCCGGGCGTCGTCCCGCATCCTGTTTGCGATCCGGTGCGGGAACCAC
ACCCGGTTGTCGCACGACCCGTACGTGTTTGACGAGGACGCGGACGAGAC
GGCGGCCCGCGGCTGGCACTGTGACGTCGACGGAGGCGTGTCTCGGCCGG
AGATGAGGCTGCTGGGCTTCTTTCCGACGGGCAGCTGC
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