mRNA_S-firma_F_contig10361.515.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10361.515.1
Unique NamemRNA_S-firma_F_contig10361.515.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI)

HSP 1 Score: 686 bits (1769), Expect = 2.020e-229
Identity = 345/482 (71.58%), Postives = 391/482 (81.12%), Query Frame = 1
Query:  688 LTSLVNDMR---PPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDILTKNEALELLKNASRATSSIPRDEGLKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVHARLVEEPTLVQDHVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAHLWEEDPSDTTLLLSDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRVQLVTCRQAQYLGTISVLKGYARAGESLRGFYALMALWASVEDLSGDQQLEVSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAINEKIHGPEHKEVAAALNNRAGLL 2124
            L +  +D R   PP     A+VP+ A +LPPAFVERR L  +V KDLVATDRAT+ AHVLRGMPGGGKT+AA +VVRC++VRRSFKDG+FWVQVGQVGTGNP ALL+GLA DLAHAPS++PHTVPHEF D EH  SHL GV ++ NLRCLV+LDDVWD QIVPLFL  GFH LVTTRD+AV+PR L+G CT V++LT  EALELLKNASRAT++IP +EGLKVA DCGFLPL +AI+GAM SSR DP S ETWRG+HA L +EP LVQD VG VL VSF  L   AR RFRKLGVL +G RAPVDMVAHLWE D  D+TLLL DLVDKSLVKV E +YYLHDLVLDFAKDELRKL+ RV+LVTCRQAQYLG +SV+K YA+AGE + GFYALMALW SVEDLSGD QLE STYG ++K  EESE +  VAY TWA GRLFELQGKF EAE LY+R QAINE+  GPEH  VA  L+ RAGL+
Sbjct:  212 LLAFYSDFRATLPPKTAYMARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVPHEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRATAAIPTNEGLKVAKDCGFLPLPLAIVGAMGSSRADPDSAETWRGIHALLQQEPELVQDPVGSVLAVSFCGLKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVMGGFYALMALWRSVEDLSGDNQLEASTYGATVKPSEESEASEDVAYLTWAVGRLFELQGKFAEAEELYDRCQAINEEALGPEHPSVATTLHGRAGLM 693          
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE)

HSP 1 Score: 521 bits (1342), Expect = 4.340e-174
Identity = 253/302 (83.77%), Postives = 276/302 (91.39%), Query Frame = 1
Query:  712 RPPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDILTKNEALELLKNASRATSSIPRDEGLKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVHARLVEEPTLVQDHVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAHLWEE 1617
            RPP   + AK+P  AP LPPAFVER  LV++VA+DL A +RATD A VLRG+PGGGKTVAASSVVRC+ VRRSFKDG+FWVQVGQVGTGNPTALLKGLAEDLAHAPSNRP TVPHEFRD EHV SHLVGVLEQGNLRCLV+LD+VWD ++VPLFLRTGF CLVTTRD+A+VPRHL GTCTPVD+LT+ EALELLK ASRATSSIPRDEGL+VADDCGFLPLAIAIIGAM SSR++PHSPETWRGVHARLVEEP+LVQDHVGG L VSFREL+EKARARFRKLGVL RGVRAPVDMVAHLWE+
Sbjct:  182 RPPKTGEMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPRTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVTTRDVAMVPRHLWGTCTPVDMLTEAEALELLKKASRATSSIPRDEGLEVADDCGFLPLAIAIIGAMGSSRVNPHSPETWRGVHARLVEEPSLVQDHVGGALAVSFRELSEKARARFRKLGVLARGVRAPVDMVAHLWEQ 483          
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.040e-88
Identity = 209/508 (41.14%), Postives = 281/508 (55.31%), Query Frame = 1
Query:  643 SEMEVLQGVDEKVDRLTSLVNDMRPPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDILTKNEALELLKNASRATSSIPRDEG----LKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVHARLVEEPTLVQ------DHVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAHLWE-EDPSDTTLLLSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTCRQAQYLGTISVLKGYA--RAGESLRGFYALMALWASVEDLSGDQQLEVSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAINEKIHGPEHKEVAAALNNRAGLL 2124
            S++ ++ G++     L +L + + PPSL D A VP  A ELP +    R  V  VA D + T   +   + + GM GGGK+V AS+ VR   VR  F+ G+FWV+VG+    +  ALL+GLA D+  AP++ PH VPH     E V  HL  V   G    LV+LDDVW+ ++V  F+  GF  L+TTRD +VV   L      +  +T+ EALELL+  S  T   P D+      KV   CG LPL +AI G+M+  R    +   W  +   L      ++        +  VL  SF  L  + +  F K+ VL  G  AP++M+ +LWE ED   T      LV K L+  V    Y +HDLVL+FAK  +R     V+  T  QAQYLG + VL+GY     G   +G + L ALW SVE LSGD +LEV++Y  SL  LE  E T  VA + W+ G LF +QGK+ EAEPLYERS AI EK+ GPEH +VA +L+NRA LL
Sbjct:  230 SDIALVDGLEHHQSFLAALPS-LLPPSLPDMAAVPTGALELPSSSYVERAAVQEVA-DGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVG--LPAGRLELGDMTEEEALELLRKTS-GTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLL 732          
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 1.260e-87
Identity = 198/477 (41.51%), Postives = 259/477 (54.30%), Query Frame = 1
Query:  736 AKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDILTKNEALELLKNASRATSSIP---RDEGLKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVHARLVEEPTLV----------QDHVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAHLWE-EDPSDTTLLLSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTCRQAQYLGTISVLKGYA--RAGESLRGFYALMALWASVEDLSGDQQLEVSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAINEKIHGPEHKEVAAALNNRA 2115
            A VP  A  LP ++VER   V  VA  L+  +       V+ GM GGGKT+  S+VVR   VR  F+ GVFW++VG+    +  +LL+GLA +++ AP++ PH VPH     E V  HL  V   G    LV+LDDVW+ ++V   L  G   LVTTRD +VV   + G    +  +T+ EALELL   SR         R +  KV   CG LPL +AI G+M+  +    +   W      L++E   V             +  VL  SF  L  + +    K+ VL  G  AP++M+ +LWE ED   T      LV K L++ V  S Y +HDLVL+F K  +R     V+  T  QAQYLG + VLK Y     G   +G + L ALW SVE LSGD +LEV++Y  SL  LE  E T  VA +    G LF +QGKFTEAEPLY RSQAI EK+ GPEH +VA +LNNRA
Sbjct:    2 AAVPAGALTLPQSYVERA-AVQEVADGLIKPEEPRAPYAVV-GMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVG--VSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWE----ELIKEFENVAKKMRVRGEQSSSIKVVLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATEDVASSYRWVGFLFNIQGKFTEAEPLYGRSQAIQEKVLGPEHPDVATSLNNRA 470          
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 1.200e-85
Identity = 227/634 (35.80%), Postives = 313/634 (49.37%), Query Frame = 1
Query:  265 VVLVQGALAPLQRARDAIQGVTDLKTTLRQRYGDYSSIIKPLESKPDVIAITEIGRELRRLTELFTRVADLLGKYTAAPADGRLAKFNLMTKRAADWEDVNKELDVIDRDVMRQLAIMNLKGAISTSEMEVLQGVDEKVDRLTSLVNDMRPPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDILTKNEALELLKNASRATSSIPRDEG----LKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVHARLVEEPTLVQ------DHVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAHLWE-EDPSDTTLLLSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTCRQAQYLGTISVLKGYARA--GESLRGFYALMALWASVEDLSGDQQLEVSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAINEKIHGPEHKEVAAALNNRAGLL 2124
            VV V GAL    RAR+A++   +  TT++ R    +S+++ L+  P  +    I REL +L  L  R+  L+  +TA+P D    +      R +  +++ K+L  ID DV R L  ++ KGA  T                      + PPSL D AKVP +A  L  +    R  V  VA D +         + + GM GGGK+V AS+VVR   VR  F+ G+FW+ VG+        LL+GL  D+  AP++ PH VPH     E V  HL  V   G    LV+LDDVW+ ++V   L  GF  LVTTRD +VV    R  C  +  +T+ EALELL   S  T   P D       KV   CG LPL +AI G++   +    +   W  +   L    T ++      + +  VL  SF  L  + +  F+K  VL  G  A  +M+ +LWE ED   T      LV K L++ V    Y +HDLVLDF K +++      + +   QAQ+LG ++VLK Y     G   +G + L ALW SVE LSGD +LEV +Y  SL ALE  E T  VA +  + G LF +Q              AI E+I GPEH +VA +L NRA LL
Sbjct:    5 VVSVLGALG---RAREAVESAHNFPTTIQDRLAGTASVLEQLQRDPRQVNRIGISRELGQLENLAIRIQTLVQDHTASPTDSCCKRLCKSITRCSRHKELEKQLQGIDGDVRRVLDAISAKGATGT----------------------VLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVA-DGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTR--CLELGDMTEEEALELLLKTS-GTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTFRKKQAFKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLSGDPKLEVPSYSTSLAALESCEATTVVASSYSSVGFLFSIQ--------------AIQEQILGPEHLDVAMSLINRAQLL 595          
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 1.010e-82
Identity = 202/503 (40.16%), Postives = 274/503 (54.47%), Query Frame = 1
Query:  643 SEMEVLQGVDEKVDRLTSLVNDMRPPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDILTKNEALELLKNASRATSSIPRDEG----LKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVHARLVEEPTLVQ------DHVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAHLWE-EDPSDTTLLLSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTCRQAQYLGTISVLKGYA--RAGESLRGFYALMALWASVEDLSGDQQLEVSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAINEKIHGPEHKEVAAALNN 2109
            S++ ++ G++     L +L + + PPSL D A VP  A ELP +    R  V  VA  L A + +     V+ GM GGGK+V AS+VVR   VR  F+ G+FWV+VG+    +  ALL+GLA D+  AP++ P  VP      E V  HL  V   G  + LV+LDDVW+ ++V  F+  GF  L+TTRD +VV   +      +  +T+ EALELL+  S A    P D+      KV   CG LPL +AI G+M+  R    +   W  +   L      ++        +  VL  SF  L  + +  F K+ VL  G  AP++M+ +LWE ED   T      LV K L+  V    Y +HDLVL+FAK  +R     V+  T  QAQYLG + VL+ Y     G   +G + L ALW SVE LSGD  LEV++Y  SL+ LE  E T  VA +  + G LF +Q K+ EAEPLYERS+AI EK+ GPEH  VA +LNN
Sbjct:  213 SDIALVDGLEHHQSFLAALPS-LLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVV-GMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVG--VPAGRLELGDVTEEEALELLRKTSGAVGQ-PGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710          
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 1.910e-81
Identity = 204/539 (37.85%), Postives = 275/539 (51.02%), Query Frame = 1
Query:  643 SEMEVLQGVDEKVDRLTSLVNDMRPPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRD--IAVVPRHLRGTCTPVDILTKNEALELLKNASRATSSIPRDEG----LKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVHARLVEEPTLVQ------DHVGGVLTVSFRELNEKARARFRKLGVLVRGVR-----------------------------APVDMVAHLWE-EDPSDTTLLLSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTCRQAQYLGTISVLKGYA--RAGESLRGFYALMALWASVEDLSGDQQLEVSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAINEKIHGPEHKEVAAALNNRAGLL 2124
            S++ ++ G++     L +L + + PPSL D A VP  A ELP +    R  V  VA  L + +       V+ GM GGGK+V AS+VVR   VR  F+ G+FWV+VG+    +  ALL+GLA ++  A ++ PHTVPH     E V  HL  V   G    LV+LDDVW+ ++V  F+  GF  L+TTRD  + VVP         V  +T+ EALELL+ +S A    P D+      KV   CG LPL +AI G+M+  +    +   W+ +   L      ++        +  VL  SF  L  + +  F KL VL                                  AP++M+ +LWE ED   T      LV K L+  V    Y +HDLVL++AK  +R     V+ VT  QA +LG + VLK Y     G   +  + L ALW SVE LSGD +LEV        ALE  E T  VA + W+ G LF +QGK+ EAEPLYERSQAI E + GPEH +V  +LNNRA LL
Sbjct:  176 SDIALVDGLEHHQSFLAALPS-LLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVV-GMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVP----AGRLEVGDMTEEEALELLRKSSGAVGQ-PGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEV--------ALESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLL 699          
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 4.950e-81
Identity = 200/509 (39.29%), Postives = 283/509 (55.60%), Query Frame = 1
Query:  643 SEMEVLQGVDEKVDRLTSLVNDMRPPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQ-GNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDILTKNEALELLKNASRATSSIPRD----EGLKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVH------ARLVEEPTLVQDHVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAHLWE-EDPSDTTLLLSDLVDKSLVKVV-EQSYYLHDLVLDFAKDELRKLRRRVQLVTCRQAQYLGTISVLKGYA--RAGESLRGFYALMALWASVEDLSGDQQLEVSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAINEKIHGPEHKEVAAALNNRAGLL 2124
            S++ ++ G+++    L +L + +RPP LLD A VP  A +LP  +VER   V  VA  L A +       V+ G+ GGGK+V AS+VVR   VR  F+ G+ WV+VG+    +   LL+GLA ++  AP++ PH VP      E V  HL  V+   G    LV+LDDVW+ ++V   +  GF  L+TTRD +VV    R     +  +T+ EALELL+  S  T   P D    +  KV   CG LPL +AI G+M++ +    +   W  +       A+ +         +  VL  SF  L  + +  F ++ VL  G  AP++M+ +LWE ED   T      LV+K L+  V +  Y +HD+VL+FAK  +R     V+  T  QAQ+LG + VLK Y     G   RG + L +LW SVE LSGD +LEV+TY  SL+ LE  + T  +A +  A G LF+ Q K+ EAEPL+ER+QA+ EK+ GPEH  VA +LNNRA LL
Sbjct:  188 SDIALVDGLEQHQLFLAALPS-LRPPRLLDMAAVPAGALDLPRGYVERA-AVQEVADGLTAPEEPRAPYTVV-GLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRL--DLGDMTEEEALELLRKTS-GTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLL 690          
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 7.450e-79
Identity = 183/488 (37.50%), Postives = 273/488 (55.94%), Query Frame = 1
Query:  691 TSLVNDMRPPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDILTKNEALELLKNASRATSSIPRD----EGLKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVHARLVEEPTLVQD------HVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAHLWE-EDPSDTTLLLSDLVDKSLVKVVEQ-SYYLHDLVLDFAKDELRKLRRRVQLVTCRQAQYLGTISVLKGYA--RAGESLRGFYALMALWASVEDLSGDQQLEVSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAINEKIHGPEHKEVAAALNNR 2112
            ++++ D+ PP+L  RA VP  A  LP ++VER  + +++  DL+  ++A    +++ GM GGGKTV AS++VR   V   F+ G+FW+++G+    +    L+GLA ++  AP++ PH VPH F   E V  HL  V+ +G+   LV+LDDVW+ ++V  FL  G   LVTTRD ++V   + G    +  + ++EALELL   S  T   P D    +  KV D CG LPL +AI G+M   +        W  +        T++ +      ++  VL  SF  L  + R  F ++ VL  G  AP +M+ +LWE +D   T      LV+K L++ V+   Y +HDL+L + + ++++   RV+  T  QAQYLG + V+  Y   + G   +G + L  LW  +E LSGD  LE ++Y   L  L+  E TA VA        L+++QGKF EAEPLYERSQ I EK+ G EH +VA ALNNR
Sbjct:  223 STMIRDVLPPTLPQRAAVPTGALALPRSYVERPGVQEAMG-DLMDPEKALAP-YMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVG--VPGGLLELGDMAEDEALELLWKTS-GTVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALAARKREEFLRMAVLAPGAVAPFEMLRNLWEIQDVEGTKEEAEGLVNKCLLQDVDGVGYRVHDLLLKYLRVKIKQDGERVKKATALQAQYLGRLDVVMSYGDQKHGADNQGLFGLGTLWRCLEKLSGDPVLETASYRAILGELDSCEATAEVANCLEWVALLYDIQGKFAEAEPLYERSQTILEKVLGSEHSDVAKALNNR 705          
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.130e-78
Identity = 192/493 (38.95%), Postives = 263/493 (53.35%), Query Frame = 1
Query:  697 LVNDMRPPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHVLRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDPQIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDIL-----TKNEALELLKNASRATSSIPRDEG----LKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVH------ARLVEEPTLVQDHVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAHLWE-EDPSDTTLLLSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTCRQAQYLGTISVLKGYA--RAGESLRGFYALMALWASVEDLSGDQQLEVSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAINEKIHGPEHKEVAAALNNRAG 2118
            +  D+ PPSL D A+VP  A ELP +    R  V  VA  L   +       V+ G+ GGGK+V AS+VVR   VR  F+ G+ WV+VG+    +   LL+GLA ++  AP++ PH VPH     E V  HL  V    N   LV+LDDVW+ ++V  F+  GF  L+TTRD ++V       C P   L     T+ EALELL+  S      P D+      KV   CG LPL +AI G+M++ +    +   W  +       A+ +         +  VL  +F  L  + +  F  + VL  G  AP++M+++LWE ED   T      LV K L+  V    Y +HDLVLDFAK  +R     V+  T  QAQYLG + V++ Y     G   +G + L ALW SVE LSGD QLEV++Y  SL ALE  E T   A + ++ G LF +QGK+ +AE LY+RS A  EK+ G EH +VA +LN+ AG
Sbjct:   32 IFTDILPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVV-GIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIV-------CDPAGRLELGDMTEEEALELLRKTSGTVD--PGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESYGDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGEATEAAARSYFSVGFLFNVQGKYDDAESLYKRSLATQEKVLGQEHPDVAQSLNDLAG 514          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10361.515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL58_ECTSI2.020e-22971.58NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5L982_9PHAE4.340e-17483.77NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI1.040e-8841.14NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5LJA6_9PHAE1.260e-8741.51NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KU94_9PHAE1.200e-8535.80NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G720_ECTSI1.010e-8240.16NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE1.910e-8137.85NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGG5_ECTSI4.950e-8139.29NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LPV9_ECTSI7.450e-7937.50NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
D7FUD7_ECTSI1.130e-7838.95NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10361contigS-firma_F_contig10361:214..5109 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LL58
PFAMsNB-ARC,TPR_10,TPR_12,TPR_16,TPR_4,TPR_7,TPR_8
Max annot lvl2759|Eukaryota
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Evalue3.34e-232
EggNOG OGsCOG0457@1|root,KOG4658@1|root,KOG1840@2759|Eukaryota,KOG4658@2759|Eukaryota
DescriptionADP binding
COG categoryS
BRITEko00000,ko00001,ko03019,ko04812
Hectar predicted targeting categoryother localisation
Exons9
Model size2513
Cds size2115
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815568.2682662-UTR-S-firma_F_contig10361:213..3511622815568.2682662-UTR-S-firma_F_contig10361:213..351Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 214..351 -
1696949422.0330658-UTR-S-firma_F_contig10361:213..3511696949422.0330658-UTR-S-firma_F_contig10361:213..351Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 214..351 -
1622815568.2831666-UTR-S-firma_F_contig10361:420..4251622815568.2831666-UTR-S-firma_F_contig10361:420..425Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 421..425 -
1696949422.0528138-UTR-S-firma_F_contig10361:420..4251696949422.0528138-UTR-S-firma_F_contig10361:420..425Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 421..425 -
1622815568.377099-UTR-S-firma_F_contig10361:3647..36501622815568.377099-UTR-S-firma_F_contig10361:3647..3650Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 3648..3650 -
1696949422.1339655-UTR-S-firma_F_contig10361:3647..36501696949422.1339655-UTR-S-firma_F_contig10361:3647..3650Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 3648..3650 -
1622815568.3960018-UTR-S-firma_F_contig10361:4345..44571622815568.3960018-UTR-S-firma_F_contig10361:4345..4457Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 4346..4457 -
1696949422.146399-UTR-S-firma_F_contig10361:4345..44571696949422.146399-UTR-S-firma_F_contig10361:4345..4457Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 4346..4457 -
1622815568.4157047-UTR-S-firma_F_contig10361:4969..51091622815568.4157047-UTR-S-firma_F_contig10361:4969..5109Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 4970..5109 -
1696949422.1585393-UTR-S-firma_F_contig10361:4969..51091696949422.1585393-UTR-S-firma_F_contig10361:4969..5109Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10361 4970..5109 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815568.2955904-CDS-S-firma_F_contig10361:425..5391622815568.2955904-CDS-S-firma_F_contig10361:425..539Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 426..539 -
1696949422.0653496-CDS-S-firma_F_contig10361:425..5391696949422.0653496-CDS-S-firma_F_contig10361:425..539Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 426..539 -
1622815568.309724-CDS-S-firma_F_contig10361:608..7311622815568.309724-CDS-S-firma_F_contig10361:608..731Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 609..731 -
1696949422.0747986-CDS-S-firma_F_contig10361:608..7311696949422.0747986-CDS-S-firma_F_contig10361:608..731Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 609..731 -
1622815568.3213086-CDS-S-firma_F_contig10361:835..9611622815568.3213086-CDS-S-firma_F_contig10361:835..961Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 836..961 -
1696949422.087448-CDS-S-firma_F_contig10361:835..9611696949422.087448-CDS-S-firma_F_contig10361:835..961Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 836..961 -
1622815568.3412027-CDS-S-firma_F_contig10361:1137..15271622815568.3412027-CDS-S-firma_F_contig10361:1137..1527Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 1138..1527 -
1696949422.0991108-CDS-S-firma_F_contig10361:1137..15271696949422.0991108-CDS-S-firma_F_contig10361:1137..1527Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 1138..1527 -
1622815568.3521454-CDS-S-firma_F_contig10361:2110..23831622815568.3521454-CDS-S-firma_F_contig10361:2110..2383Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 2111..2383 -
1696949422.109555-CDS-S-firma_F_contig10361:2110..23831696949422.109555-CDS-S-firma_F_contig10361:2110..2383Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 2111..2383 -
1622815568.3631988-CDS-S-firma_F_contig10361:2558..36471622815568.3631988-CDS-S-firma_F_contig10361:2558..3647Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 2559..3647 -
1696949422.1214926-CDS-S-firma_F_contig10361:2558..36471696949422.1214926-CDS-S-firma_F_contig10361:2558..3647Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10361 2559..3647 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10361.515.1prot_S-firma_F_contig10361.515.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10361 426..3647 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10361.515.1

>prot_S-firma_F_contig10361.515.1 ID=prot_S-firma_F_contig10361.515.1|Name=mRNA_S-firma_F_contig10361.515.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=705bp
MDPVVLVQGALAPLQRARDAIQGVTDLKTTLRQRYGDYSSIIKPLESKPD
VIAITEIGRELRRLTELFTRVADLLGKYTAAPADGRLAKFNLMTKRAADW
EDVNKELDVIDRDVMRQLAIMNLKGAISTSEMEVLQGVDEKVDRLTSLVN
DMRPPSLLDRAKVPRKAPELPPAFVERRKLVDSVAKDLVATDRATDQAHV
LRGMPGGGKTVAASSVVRCDEVRRSFKDGVFWVQVGQVGTGNPTALLKGL
AEDLAHAPSNRPHTVPHEFRDAEHVTSHLVGVLEQGNLRCLVILDDVWDP
QIVPLFLRTGFHCLVTTRDIAVVPRHLRGTCTPVDILTKNEALELLKNAS
RATSSIPRDEGLKVADDCGFLPLAIAIIGAMASSRIDPHSPETWRGVHAR
LVEEPTLVQDHVGGVLTVSFRELNEKARARFRKLGVLVRGVRAPVDMVAH
LWEEDPSDTTLLLSDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRV
QLVTCRQAQYLGTISVLKGYARAGESLRGFYALMALWASVEDLSGDQQLE
VSTYGVSLKALEESEPTAHVAYTTWAAGRLFELQGKFTEAEPLYERSQAI
NEKIHGPEHKEVAAALNNRAGLLEKQGKFSEAEPLYKRTQDIFEKSLGAD
HPSVATILNDRAGLLRNGRYSEAEPLYERCQAIEEKVLGPEHPSLAITLN
NRGC*
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mRNA from alignment at S-firma_F_contig10361:214..5109-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10361.515.1 ID=mRNA_S-firma_F_contig10361.515.1|Name=mRNA_S-firma_F_contig10361.515.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4896bp|location=Sequence derived from alignment at S-firma_F_contig10361:214..5109- (Sphaerotrichia firma ET2_F female)
CCTCCACTCGCTTCACTTTCGCCGCCAACAAGAGCACAGGCAATGACCAC GAGTAGTCACGCTTCGTGCTCAAGAACAACGGGTCCCAGCGCCACTGTGC ATCTATCGTCCCTGCACCTGCAGATCGAGCGTGCCTACTGGTGAGCGCGT GCGGAGAGATTTCTCCGACTGAACTCGTTTGTTGATGCACTCTTTCCAGA AGCCTGTTTCGTGGACGCACATTTGTTGTGAACACTTGGCGCACAGTGGA CGAGACCGCGAGACAGGCATGCTGCCTCCCCAGAGATGGTATGCGTATGG CCTGACAAGCTGATATGGAAGCTGCCTCATCTTTGTTATTTATTTTTCAC TGAAGTTTGGCGTGCTTCCGCGCCCCCTTTGTTCTTGGCACCGAAGTCTT CCATTTTGCCGCTCGGGATATGGTGTGCAGCAGTTCTACCCTTTTTCAGC GTACCTTCTGCTGTTGCTTTGAGTTGGCGGCGTTGAAGCTAGATGATCTG TGGCGTAAGCCCCGTGGTGACATGTGATGCTGTACACCGCTGGGGTGAAG CAGCTTTTTTTTCTTGGCCGTGTCCCGTTTTGTAGATGCACTCTTTTTTT AGTGTCTGCTGCGTGTGAACGCCCTGTTCGATGTCCCGTAAACAAACCAC AGAGGCAACCAGCAGCAGTAAGCCAGGGTGCGCATCGCACGCATTGCACT CGAGAAAGAGAGGATTTAGCACCACCGCACGCCCACCGTGCCTGGGAATC GAGCGCCCGAGTAGGTGAGAGTCCGGAGACCCGCGGAACGTTGTTGTATG GAACTTTCTGTGCGGTCTTGCAGATATGTGGCCTTTGCGGTCAAAGTGTC GTCGATATTATACCACGTGGCTAAGCCCGGACGAATTTTCGGGGCAGGAC GCATGCTACAGCCCTGCGAGCTCCCGCGTGTGGCATGACAAGCTGGTTGT GTGTCGTCCAACATGTGTTTATTTTGACAAATACGTGCTGTTCTGGGGTT GTGCGTGTTCCTGTTGTTGAAACGTTCCGCCTTCCGAGAACCGTGCCGAG AACTTTCCCATCGAAGCGTACATCTGTCAACCGTTTTTCTAGACCTTCCT GCGGTCGGCCTCGGGGATATATTGCTGTCTCTCGCCAAGCGTTACGAAAC CGAACGCAGCATTTTTTTTTGCTTCTTGGCCAGTAGGTCTTCCTCGAGGC GCGTCGAAAAACTCGATACCACCGCAGTGGCCCCAAATTTGTCGTCGCTC CACATGACTGATCCTGTGGGGCTTGTACTGTCAGTCCTTGGCACGTTTGA AAGGGCGCCCGCGGCGGTAGAGAGCTCTAACACCTTCCCGACCAAATAGA AGACCGTCTCACGGGTACCTAGTCCGTATGGTATCGATGCACGTGTCCCT GAACAGTATTTCGTCTGCGTGTGGTGCGCTCATGTTGTTTGTCCCGTTCG ATTTGACAGGAGATGGATCCTGTGGTGCTTGTGCAAGGAGCTCTAGCTCC TCTGCAGAGGGCCCGCGATGCCATTCAAGGCGTGACAGATCTCAAGACGA CCCTGAGGCAGCGTTACGGCGACTACTCCTCCATCATAAAACCGCTCGAA AGCAAACCCGACGTGATCGCCATCACCGAGATCGGGCGCGAACTTCGTCG ACTGACTGAGCTCTTCACCAGAGTCGCGGACTTGCTTGGCAAGTACACCG CGGCACCGGCAGACGGCAGGTTGGCGAAGTTCAACCTCATGACCAAGAGG GCAGCCGACTGGGAGGACGTGAATAAGGAGTTGGATGTGATCGACCGCGA TGTGATGCGCCAGCTGGCAATCATGAATCTCAAGGGGGCTATCAGTACGT CGGAGATGGAGGTTCTGCAGGGTGTGGACGAGAAGGTAGACCGTCTAACC TCTCTCGTAAATGACATGCGCCCTCCAAGCTTGCTGGACAGGGCCAAGGT ACCCCGGAAAGCTCCAGAGCTGCCACCGGCGTTTGTGGAGCGGAGAAAAC TTGTCGACTCCGTCGCGAAAGACCTCGTGGCGACGGACCGGGCGACCGAT CAAGCTCACGTGCTCCGTGGCATGCCTGGGGGGGGCAAGACCGTCGCCGC CAGTTCAGTTGTGCGCTGTGACGAGGTACGCAGGAGCTTCAAGGACGGAG TATTCTGGGTGCAAGTAGGCCAAGTGGGCACGGGAAACCCAACCGCCCTG CTGAAGGGCTTGGCGGAAGACCTTGCGCACGCGCCCTCTAATCGACCACA CACAGTCCCGCACGAGTTCAGGGACGCCGAGCACGTCACGAGTCATCTTG TGGGCGTTCTCGAGCAGGGCAACCTTCGATGCCTGGTAATTCTGGATGAC GTTTGGGACCCGCAGATTGTTCCATTGTTCCTGCGTACAGGATTTCATTG CCTGGTGACTACGCGCGATATCGCAGTGGTGCCCCGACACCTACGCGGAA CGTGCACACCGGTGGATATCCTGACGAAAAACGAGGCACTGGAACTCCTC AAGAACGCTAGTCGGGCAACTTCAAGCATTCCGAGGGACGAAGGCCTGAA GGTGGGGGATTTCATTGAAAATATGTATTTCACGTCTAAGGCACCTCCAA ACATCTTTTTAGGAACGGTGTACCTTCGCTTGCAGTTTGTACTTTCGCGG CAGAGACCCTTGGACCGCAAGCTGCAGCGTTTTGATGATTTTTTGCGCCG CGTCAAATGTGTACTGTCCCCCACAGGTTGCCGATGACTGTGGTTTTCTC CCGCTTGCCATCGCCATCATCGGTGCCATGGCTAGCTCGCGAATAGACCC ACACTCCCCCGAGACATGGCGCGGTGTGCACGCGCGGCTAGTCGAAGAAC CAACTCTGGTCCAAGACCATGTTGGAGGTGTCCTCACCGTCAGCTTTCGT GAGCTCAACGAGAAGGCCAGGGCGCGATTCCGCAAGCTTGGTGTGTTGGT GCGGGGGGTACGTGCTCCAGTCGACATGGTGGCCCATCTCTGGGAAGAGG TATGTTCCGTTTGCCCACAAACTTCCACGCGTGTGCGTGCTGTTGGTTTG CGCCGTTTAGGGAAGGCGCCATTTCCCTCAACTCAAAAGTCCAGCTGTCT CGCTTGGTGTCGGACTCGGTTTGAGTGGACGGATAGTGCTCATTGCGTAC ATTTGTATAAACATCGACTTACGGTGGCTTCAGGAGGCATGACAGCAACG TCGGGCGCGGGTTGCGAATACGTTACTGTTGTGATGAACGTATTCAATAC ATTGGCACAATTTAATAGGTTCATCATGAAGAAATACGTGCAACAAGGAG GGGGTACCGTGGGGTCATTGGGGGTTCCGTCGATCAATTTTCACAAAAAG TGGCGTTTTCCCCAATAAAAAAAAACTCGTCGGATATCGACGTAGTTCGA CGTTGCGGTCAGGGCGGAAGTTGTGTTACTTTCCAAATTGATTTTTAGAA ACTTTCGACGAGGAATGAAAAAATTCGGCGACACAGGCCATGGTGGGTGC ACCGCTTACGGGATGTGTTTTTCACGATTTAGTGACACACTGCTTGTCGT GGGGTGTCCGTTATTCCTGATTATACACACAGGACCCTAGCGACACAACG TTGTTGTTGAGCGACCTGGTGGACAAGTCCCTCGTGAAGGTCGTGGAACA GAGCTACTACCTGCACGATCTCGTGCTCGATTTTGCGAAAGACGAGCTCA GGAAGTTGAGGAGGCGGGTGCAGCTCGTCACGTGCCGCCAGGCGCAGTAC CTGGGCACGATATCCGTGCTCAAGGGATACGCGCGGGCTGGTGAGTCGTT GCGGGGGTTCTACGCCCTCATGGCTCTGTGGGCGTCAGTGGAGGACCTGT CTGGCGACCAGCAGCTGGAGGTAAGCACGTACGGGGTCAGCCTGAAGGCC TTGGAGGAGAGCGAGCCGACAGCACACGTAGCCTACACGACCTGGGCTGC GGGGAGGTTGTTCGAACTCCAGGTGAGCTTTCAGCGTCCTTTTGTGGTTG TAATGCATCAGAAAGGCGGGCTTAAGTGGTGGTTGTCTGAAACGTGAAGG TAACTAGCGTGTGAAAAGTCACGGTATACATGTGTCGGTTGTATATTTTG CATCTCGGTGGACCGCCGGTTTACACCGACCCATTGCTTGTTTCACAGGG CAAGTTTACTGAGGCAGAGCCACTGTACGAGCGGTCGCAGGCCATAAACG AGAAGATACACGGCCCGGAGCATAAAGAGGTTGCAGCAGCGCTCAACAAC AGGGCGGGGTTGTTGGAGAAGCAGGTGAGAGCCGTCAGAATATTCCCGGA ATTTCACAGGGTCAAAGTTGGCTTTGAGCGTTTTTGTTTCTGGATTGCCT TTTACCCCAACCACTGCTTGTTGTCCAGGGCAAATTCTCGGAAGCGGAGC CGCTGTACAAGAGGACGCAGGATATTTTTGAGAAATCGTTAGGGGCGGAC CATCCAAGCGTGGCCACAATTCTCAACGACCGGGCGGGGTTGTTGAGAAA TGTTCCTCCGCACTCAATTTTCGATTGTCGCACTGAAATACGACTAAACT ATGCTGTCCACTGCATTCAGGGAAGATACTCCGAGGCTGAGCCACTCTAT GAGCGGTGTCAGGCAATAGAGGAGAAGGTTCTGGGCCCTGAGCACCCAAG TCTAGCCATAACGCTCAACAACCGGGGTTGTTGAGAAATGTTCGTCCGCA TTTCTTGATCCGAATAAATAACGAACATTTCTCTGCTGCGCTGTTCACAA CATTCCAGGGCAAGTACGCCGAAGCTGAGCCACTCTATGAGCGGTGTCAG GCAATAGACGAGAAGGTTCATGGCCCTGATCACCCGGATGTGGCCACAAC GCTCAACAACCGGGCGGGGTTGTTGGAGGCACAGGTGAGAGTCGCC
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Coding sequence (CDS) from alignment at S-firma_F_contig10361:214..5109-

>mRNA_S-firma_F_contig10361.515.1 ID=mRNA_S-firma_F_contig10361.515.1|Name=mRNA_S-firma_F_contig10361.515.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4230bp|location=Sequence derived from alignment at S-firma_F_contig10361:214..5109- (Sphaerotrichia firma ET2_F female)
ATGGATCCTGTGGTGCTTGTGCAAGGAGCTCTAGCTCCTCTGCAGAGGGC
CCGCGATGCCATTCAAGGCGTGACAGATCTCAAGACGACCCTGAGGCAGC
GTTACGGCGACTACTCCTCCATCATAAAACCGCTCGAAAGCAAACCCGAC
GTGATCGCCATCACCGAGATCGGGCGCGAACTTCGTCGACTGACTGAGCT
CTTCACCAGAGTCGCGGACTTGCTTGGCAAGTACACCGCGGCACCGGCAG
ACGGCAGGTTGGCGAAGTTCAACCTCATGACCAAGAGGGCAGCCGACTGG
GAGGACGTGAATAAGGAGTTGGATGTGATCGACCGCGATGTGATGCGCCA
GCTGGCAATCATGAATCTCAAGGGGGCTATCAGTACGTCGGAGATGGAGG
TTCTGCAGGGTGTGGACGAGAAGGTAGACCGTCTAACCTCTCTCGTAAAT
GACATGCGCCCTCCAAGCTTGCTGGACAGGGCCAAGGTACCCCGGAAAGC
TCCAGAGCTGCCACCGGCGTTTGTGGAGCGGAGAAAACTTGTCGACTCCG
TCGCGAAAGACCTCGTGGCGACGGACCGGGCGACCGATCAAGCTCACGTG
CTCCGTGGCATGCCTGGGGGGGGCAAGACCGTCGCCGCCAGTTCAGTTGT
GCGCTGTGACGAGGTACGCAGGAGCTTCAAGGACGGAGTATTCTGGGTGC
AAGTAGGCCAAGTGGGCACGGGAAACCCAACCGCCCTGCTGAAGGGCTTG
GCGGAAGACCTTGCGCACGCGCCCTCTAATCGACCACACACAGTCCCGCA
CGAGTTCAGGGACGCCGAGCACGTCACGAGTCATCTTGTGGGCGTTCTCG
AGCAGGGCAACCTTCGATGCCTGGTAATTCTGGATGACGTTTGGGACCCG
CAGATTGTTCCATTGTTCCTGCGTACAGGATTTCATTGCCTGGTGACTAC
GCGCGATATCGCAGTGGTGCCCCGACACCTACGCGGAACGTGCACACCGG
TGGATATCCTGACGAAAAACGAGGCACTGGAACTCCTCAAGAACGCTAGT
CGGGCAACTTCAAGCATTCCGAGGGACGAAGGCCTGAAGATGGATCCTGT
GGTGCTTGTGCAAGGAGCTCTAGCTCCTCTGCAGAGGGCCCGCGATGCCA
TTCAAGGCGTGACAGATCTCAAGACGACCCTGAGGCAGCGTTACGGCGAC
TACTCCTCCATCATAAAACCGCTCGAAAGCAAACCCGACGTGATCGCCAT
CACCGAGATCGGGCGCGAACTTCGTCGACTGACTGAGCTCTTCACCAGAG
TCGCGGACTTGCTTGGCAAGTACACCGCGGCACCGGCAGACGGCAGGTTG
GCGAAGTTCAACCTCATGACCAAGAGGGCAGCCGACTGGGAGGACGTGAA
TAAGGAGTTGGATGTGATCGACCGCGATGTGATGCGCCAGCTGGCAATCA
TGAATCTCAAGGGGGCTATCAGTACGTCGGAGATGGAGGTTCTGCAGGGT
GTGGACGAGAAGGTAGACCGTCTAACCTCTCTCGTAAATGACATGCGCCC
TCCAAGCTTGCTGGACAGGGCCAAGGTACCCCGGAAAGCTCCAGAGCTGC
CACCGGCGTTTGTGGAGCGGAGAAAACTTGTCGACTCCGTCGCGAAAGAC
CTCGTGGCGACGGACCGGGCGACCGATCAAGCTCACGTGCTCCGTGGCAT
GCCTGGGGGGGGCAAGACCGTCGCCGCCAGTTCAGTTGTGCGCTGTGACG
AGGTACGCAGGAGCTTCAAGGACGGAGTATTCTGGGTGCAAGTAGGCCAA
GTGGGCACGGGAAACCCAACCGCCCTGCTGAAGGGCTTGGCGGAAGACCT
TGCGCACGCGCCCTCTAATCGACCACACACAGTCCCGCACGAGTTCAGGG
ACGCCGAGCACGTCACGAGTCATCTTGTGGGCGTTCTCGAGCAGGGCAAC
CTTCGATGCCTGGTAATTCTGGATGACGTTTGGGACCCGCAGATTGTTCC
ATTGTTCCTGCGTACAGGATTTCATTGCCTGGTGACTACGCGCGATATCG
CAGTGGTGCCCCGACACCTACGCGGAACGTGCACACCGGTGGATATCCTG
ACGAAAAACGAGGCACTGGAACTCCTCAAGAACGCTAGTCGGGCAACTTC
AAGCATTCCGAGGGACGAAGGCCTGAAGGTTGCCGATGACTGTGGTTTTC
TCCCGCTTGCCATCGCCATCATCGGTGCCATGGCTAGCTCGCGAATAGAC
CCACACTCCCCCGAGACATGGCGCGGTGTGCACGCGCGGCTAGTCGAAGA
ACCAACTCTGGTCCAAGACCATGTTGGAGGTGTCCTCACCGTCAGCTTTC
GTGAGCTCAACGAGAAGGCCAGGGCGCGATTCCGCAAGCTTGGTGTGTTG
GTGCGGGGGGTACGTGCTCCAGTCGACATGGTGGCCCATCTCTGGGAAGA
GGTTGCCGATGACTGTGGTTTTCTCCCGCTTGCCATCGCCATCATCGGTG
CCATGGCTAGCTCGCGAATAGACCCACACTCCCCCGAGACATGGCGCGGT
GTGCACGCGCGGCTAGTCGAAGAACCAACTCTGGTCCAAGACCATGTTGG
AGGTGTCCTCACCGTCAGCTTTCGTGAGCTCAACGAGAAGGCCAGGGCGC
GATTCCGCAAGCTTGGTGTGTTGGTGCGGGGGGTACGTGCTCCAGTCGAC
ATGGTGGCCCATCTCTGGGAAGAGGACCCTAGCGACACAACGTTGTTGTT
GAGCGACCTGGTGGACAAGTCCCTCGTGAAGGTCGTGGAACAGAGCTACT
ACCTGCACGATCTCGTGCTCGATTTTGCGAAAGACGAGCTCAGGAAGTTG
AGGAGGCGGGTGCAGCTCGTCACGTGCCGCCAGGCGCAGTACCTGGGCAC
GATATCCGTGCTCAAGGGATACGCGCGGGCTGGTGAGTCGTTGCGGGGGT
TCTACGCCCTCATGGCTCTGTGGGCGTCAGTGGAGGACCTGTCTGGCGAC
CAGCAGCTGGAGGTAAGCACGTACGGGGTCAGCCTGAAGGCCTTGGAGGA
GAGCGAGCCGACAGCACACGTAGCCTACACGACCTGGGCTGCGGGGAGGT
TGTTCGAACTCCAGGACCCTAGCGACACAACGTTGTTGTTGAGCGACCTG
GTGGACAAGTCCCTCGTGAAGGTCGTGGAACAGAGCTACTACCTGCACGA
TCTCGTGCTCGATTTTGCGAAAGACGAGCTCAGGAAGTTGAGGAGGCGGG
TGCAGCTCGTCACGTGCCGCCAGGCGCAGTACCTGGGCACGATATCCGTG
CTCAAGGGATACGCGCGGGCTGGTGAGTCGTTGCGGGGGTTCTACGCCCT
CATGGCTCTGTGGGCGTCAGTGGAGGACCTGTCTGGCGACCAGCAGCTGG
AGGTAAGCACGTACGGGGTCAGCCTGAAGGCCTTGGAGGAGAGCGAGCCG
ACAGCACACGTAGCCTACACGACCTGGGCTGCGGGGAGGTTGTTCGAACT
CCAGGGCAAGTTTACTGAGGCAGAGCCACTGTACGAGCGGTCGCAGGCCA
TAAACGAGAAGATACACGGCCCGGAGCATAAAGAGGTTGCAGCAGCGCTC
AACAACAGGGCGGGGTTGTTGGAGAAGCAGGGCAAGTTTACTGAGGCAGA
GCCACTGTACGAGCGGTCGCAGGCCATAAACGAGAAGATACACGGCCCGG
AGCATAAAGAGGTTGCAGCAGCGCTCAACAACAGGGCGGGGTTGTTGGAG
AAGCAGGGCAAATTCTCGGAAGCGGAGCCGCTGTACAAGAGGACGCAGGA
TATTTTTGAGAAATCGTTAGGGGCGGACCATCCAAGCGTGGCCACAATTC
TCAACGACCGGGCGGGGTTGTTGAGAAATGGCAAATTCTCGGAAGCGGAG
CCGCTGTACAAGAGGACGCAGGATATTTTTGAGAAATCGTTAGGGGCGGA
CCATCCAAGCGTGGCCACAATTCTCAACGACCGGGCGGGGTTGTTGAGAA
ATGGAAGATACTCCGAGGCTGAGCCACTCTATGAGCGGTGTCAGGCAATA
GAGGAGAAGGTTCTGGGCCCTGAGCACCCAAGTCTAGCCATAACGCTCAA
CAACCGGGGTTGTTGAGGAAGATACTCCGAGGCTGAGCCACTCTATGAGC
GGTGTCAGGCAATAGAGGAGAAGGTTCTGGGCCCTGAGCACCCAAGTCTA
GCCATAACGCTCAACAACCGGGGTTGTTGA
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