prot_S-firma_M_contig9989.20965.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9989.20965.1
Unique Nameprot_S-firma_M_contig9989.20965.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length43
Homology
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BLAST of mRNA_S-firma_M_contig9989.20965.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.410e-16
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0 
Query:    1 AVDSQLWVNDKLSDSVREALSDVLAVAAGFLPPWVDALLSSFP 43
            A D+ LWVNDKL+DSVREALSD+LAVAAGFLPPWVDALLS FP
Sbjct: 2890 AADTMLWVNDKLADSVREALSDMLAVAAGFLPPWVDALLSGFP 2932
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9989.20965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KW24_9PHAE1.410e-1686.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9989contigS-firma_M_contig9989:4..622 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9989.20965.1mRNA_S-firma_M_contig9989.20965.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9989 3..622 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9989.20965.1 ID=prot_S-firma_M_contig9989.20965.1|Name=mRNA_S-firma_M_contig9989.20965.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=43bp
AVDSQLWVNDKLSDSVREALSDVLAVAAGFLPPWVDALLSSFP
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