prot_S-firma_M_contig998.20960.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig998.20960.1
Unique Nameprot_S-firma_M_contig998.20960.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length182
Homology
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BLAST of mRNA_S-firma_M_contig998.20960.1 vs. uniprot
Match: D7G116_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G116_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.600e-45
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 0 
Query:  104 LDGAYKIGELVNFNGGRVQPQSLEPKHALTFRVEIGGHMVAYVSGESKPARRTRMVKADLVARNGVFVHVVDKILYAE 181
            +DGAYKIGELVNFNGGRVQPQSLEPKHAL FRVEIGGHMVAYVSGE+KPARRTRMVK DL+ARNGVFVHVVDKILYAE
Sbjct:    1 MDGAYKIGELVNFNGGRVQPQSLEPKHALIFRVEIGGHMVAYVSGETKPARRTRMVKTDLIARNGVFVHVVDKILYAE 78
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BLAST of mRNA_S-firma_M_contig998.20960.1 vs. uniprot
Match: A0A8J2X3H5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3H5_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.990e-14
Identity = 52/177 (29.38%), Postives = 90/177 (50.85%), Query Frame = 0 
Query:    6 ARKLRSIVSENDDEHRFGRPLPRTLTEVLAGSGCHLFLEAMRK-AKRLQGANSVTILAPNDNAFHSALGHRFLRPPSHDCVRTRYPEDAFEDSSWGLHILDGAYKIGELVNFNGGRVQPQSLEPKHALTFRVEIGGHMVAYVSGESKPARRTRMVKADLVARNGVFVHVVDKILYAE 181
            A KLR++  +  +  R    L    +++ A   C  F + +R+ A  L+G    T+L P D+AF   LG                 +DAFED  WG+H++DG +K+G++     GRV  + ++ +H +  RV+  G    ++  +  P RR  +++ D+  ++G  +HVVD ILY +
Sbjct:  326 AAKLRTVRLK--ERRRQFSLLLDVQSQLDALENCGKFAQLVREQAPDLRGC---TVLVPTDDAF---LGD----------------DDAFEDDCWGVHVIDGPWKMGDMAV--AGRVLGRHVDTRHGIRTRVQPDGRYAVWLDTDPSPPRRALVLEMDISCQHGTVLHVVDGILYPD 476
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig998.20960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G116_ECTSI1.600e-4593.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2X3H5_9STRA6.990e-1429.38Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10coord: 40..180
e-value: 3.2E-11
score: 45.6
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 15..179
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 42..179
e-value: 5.7E-8
score: 33.0
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 26..178
score: 8.202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig998contigS-firma_M_contig998:11233..13254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig998.20960.1mRNA_S-firma_M_contig998.20960.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig998 11049..13327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig998.20960.1 ID=prot_S-firma_M_contig998.20960.1|Name=mRNA_S-firma_M_contig998.20960.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=182bp
MSDSAARKLRSIVSENDDEHRFGRPLPRTLTEVLAGSGCHLFLEAMRKAK
RLQGANSVTILAPNDNAFHSALGHRFLRPPSHDCVRTRYPEDAFEDSSWG
LHILDGAYKIGELVNFNGGRVQPQSLEPKHALTFRVEIGGHMVAYVSGES
KPARRTRMVKADLVARNGVFVHVVDKILYAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
IPR036378FAS1_dom_sf