prot_S-firma_M_contig996.20938.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig996.20938.1
Unique Nameprot_S-firma_M_contig996.20938.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length450
Homology
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.630e-30
Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = 0
Query:   33 SGTTTQRGGISGGVAISEGFSLLCTVDMQAEPGATDRRCLNAFVVALNQTVDLGTWYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARAVTWKWAAAA-WDVPIYSLTEVVSISFGDSFNDNVDGVAWPSRVKT 194
            SG+  ++   +GGV +     L      + + G T + CL A +VALN+T D  +WY  T +LQLASL  C+ACR+ +T+HL VD +IPR LL + D  P H   L  TRVPR R+R VTW    AA    PI+++T++  + FGD+F D+++ V WP  ++T
Sbjct:   19 SGSDARKNRRNGGVLMRPSTIL------RVQKGPTRKFCLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRT 175          
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 3.730e-30
Identity = 63/137 (45.99%), Postives = 88/137 (64.23%), Query Frame = 0
Query:   58 VDMQAEPGATDRRCLNAFVVALNQTVDLGTWYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARAVTWKWAAAA-WDVPIYSLTEVVSISFGDSFNDNVDGVAWPSRVK 193
            +D   E G T   CL++ +VALN+T D  +WY  T +LQ ASL+ C+ACR+   +HL VD +IPR+LL   D  P H   L  TRVPR RAR+VTW   AAA    PI+++T+V  + FG +F+ +++ V WP R+K
Sbjct:    1 MDHHEETGLTHNPCLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLK 137          
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 8.940e-28
Identity = 65/144 (45.14%), Postives = 86/144 (59.72%), Query Frame = 0
Query:   52 FSLLCTVDMQAEPGATDRRCLNAFVVALNQTVDLGTWYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARAVTWKWAAAA-WDVPIYSLTEVVSISFGDSFNDNVDGVAWPSRVKT 194
            F   C + +   PG T   CLNA  VAL +T D  +WY  T +LQLASL+ C+ACR+ +TLHL VD RIPR LL   D  P H   L   RVPR RAR VTW    AA    PI++L ++  + FG +F  +++ V WP R+++
Sbjct:   17 FVTFCPLIVYCSPGPTSNTCLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLES 160          
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 4.150e-27
Identity = 66/136 (48.53%), Postives = 83/136 (61.03%), Query Frame = 0
Query:   60 MQAEPGATDRRCLNAFVVALNQTVDLGTWYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARAVTWKW-AAAAWDVPIYSLTEVVSISFGDSFNDNVDGVAWPSRVKT 194
            M +  G     CLNA +VALN+T D  +WY  T + QLASL+ C+ACR+ +TL L VDSR PR LL   D  P H   L  TRVPR RAR VTW    AA     IYS+ +  S+ F  +F D+++ VAWP R+KT
Sbjct:    1 MFSSSGPARDSCLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKT 136          
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.590e-25
Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = 0
Query:   64 PGATDRRCLNAFVVALNQTVDLGTWYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARAVTWKWAAAA-WDVPIYSLTEVVSISFGDS 178
            PG +   CLNA V+ALN+T +  +WY  T +LQLASL+ CVACR+ +TLHL VD++IPR LL   D  P H + L  TRVPR RAR VTW    AA   +PI+++T+V  + FG++
Sbjct:  106 PGPSRSSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFGET 221          
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.470e-24
Identity = 60/131 (45.80%), Postives = 78/131 (59.54%), Query Frame = 0
Query:   65 GATDRRCLNAFVVALNQTVDLGTWYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARAVTWKW-AAAAWDVPIYSLTEVVSISFGDSFNDNVDGVAWPSRVKT 194
            G T   CL    VALN+T D  +WY  T +LQLASL+LC+ACR  +TLHLTVD+  PR LL   D    H   L  TRVPR RAR  TW    A+     I++  +V  + FG +F+ ++D + WP R+KT
Sbjct:  130 GPTRSSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKT 260          
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: A0A6H5K4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H1_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 8.880e-20
Identity = 61/131 (46.56%), Postives = 74/131 (56.49%), Query Frame = 0
Query:   70 RCLNAFVVALNQT-VDLGTWYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGP-----TRVPRFRARAVTW-KWAAAAWDVPIYSLTEVVSISFGDSFNDNVDGVAWPSRVK 193
            RCL AF VAL QT +D  +WYV TTQLQLASL  C+ACR   TL LTVD  IPR LL +   +       GP     +RVPRF AR VTW + +       IY+L EV        FN  +  VAWP +++
Sbjct:   29 RCLEAFRVALQQTCLDRESWYVSTTQLQLASLPFCLACRDSVTLCLTVDDSIPRRLLADVGGNEAVVAPAGPCQCGRSRVPRFHAREVTWHRQSCVELSASIYALAEVDFFILDGGFNRAIGAVAWPRKLR 159          
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 6.120e-17
Identity = 52/129 (40.31%), Postives = 72/129 (55.81%), Query Frame = 0
Query:   69 RRCLNA---FVVALNQTVDLGTWYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARAVTWKWAAAA-WDVPIYSLTEVVSISFGDSFNDNVDGVAWPSRVK 193
            RRC +     ++ALN+  D   WY  T +LQLASL+ C+ACR  + L L VD++ PR+LL   D  P H      TRVPR RAR V W    A      +++L +V  + FG  FN +++ V WP  +K
Sbjct:   12 RRCSSGSKDLILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLK 140          
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: D8LCS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS9_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 8.500e-16
Identity = 54/127 (42.52%), Postives = 67/127 (52.76%), Query Frame = 0
Query:   70 RCLNAFVVALNQTVDLGTWYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARAVTWKWAAAAW--DVPIYSLTEVVSISFGDS-----FNDNVDGVAWP 189
            RCL+A +VAL    D   WY PTTQLQLASL  C ACR+V T+HLTVD  +P  L    D         G +RVP FR R VTW    AA   +  +++   V+ +  G       FN  VDG+  P
Sbjct:   84 RCLDALIVALTNAGDGQGWYTPTTQLQLASLDFCTACRAVPTVHLTVDGDVPARLKAGIDNG-------GASRVPAFRPRCVTWNKPIAALRGEDDVFADVRVLVLGHGLGRVGVRFNRWVDGLQLP 203          
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Match: A0A6H5K0U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U4_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.920e-14
Identity = 58/136 (42.65%), Postives = 73/136 (53.68%), Query Frame = 0
Query:   61 QAEPGA--TDRRCLNAFVVALNQTVDLGT---WYVPTTQLQLASLQLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARAVTWKWAAA-AWDVPIYSLTEVVSISFGDSFNDNVDGVAWPS 190
            +A+ GA  T+ R L+  +V LNQ    G    W+  T +LQLASLQLC ACR    LHL V++  P  LL   D SP      G TRVPR RAR V+W   +A      IY+L      +F DS N  +D V WP+
Sbjct:   17 EAKSGAAPTNSRFLDVVIVVLNQACGDGGQKHWFASTKELQLASLQLCEACRDAAALHLRVNTSTPLRLLAPAD-SPSDGSEEG-TRVPRLRAREVSWDLTSADRLSSSIYALASAQVFTFSDSLNAVLDAVVWPT 150          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig996.20938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRF9_9PHAE3.630e-3041.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH81_ECTSI3.730e-3045.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZZ4_9PHAE8.940e-2845.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUA5_9PHAE4.150e-2748.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2S9_ECTSI1.590e-2550.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPY7_9PHAE1.470e-2445.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4H1_9PHAE8.880e-2046.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRK5_9PHAE6.120e-1740.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS9_ECTSI8.500e-1642.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0U4_9PHAE1.920e-1442.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 215..434
e-value: 2.7E-8
score: 34.6
IPR008615FNIPPFAMPF05725FNIPcoord: 311..353
e-value: 1.8E-9
score: 37.6
coord: 267..308
e-value: 8.9E-5
score: 22.6
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 233..375
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 172..308
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 233..375
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 172..308
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 220..403

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig996contigS-firma_M_contig996:3307..5681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig996.20938.1mRNA_S-firma_M_contig996.20938.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig996 2821..6020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig996.20938.1 ID=prot_S-firma_M_contig996.20938.1|Name=mRNA_S-firma_M_contig996.20938.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=450bp
MCTWALIGKGSSDIRLPCNILHTSPWIDSGCTSGTTTQRGGISGGVAISE
GFSLLCTVDMQAEPGATDRRCLNAFVVALNQTVDLGTWYVPTTQLQLASL
QLCVACRSVKTLHLTVDSRIPRHLLDNDDTSPLHYDGLGPTRVPRFRARA
VTWKWAAAAWDVPIYSLTEVVSISFGDSFNDNVDGVAWPSRVKTIGFGRK
FDQNIEHVRWPDSVELLAFGCDFDQRIKWVRWPKSLRTLWLGDTFSDMIE
DVTWPATLEDILFGACFNEPIERVAWPPLLRELEFGDSFDRPIEGVAWPA
SLEVLIFGMEFDQPIEKVRWPSSLRTLTFGDNFNQPIDTVVWPPSLQQID
FGEEFNQPIDRAVWPSSVERLSLENRYYDKPLGRIGKWLPNLRVLTLNLN
PNNYQHSLVGAIWPAGLELMVISTGKWEDQADLLPEGVAFREFYCCWRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf