prot_S-firma_M_contig9912.20900.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9912.20900.1
Unique Nameprot_S-firma_M_contig9912.20900.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length443
Homology
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BLAST of mRNA_S-firma_M_contig9912.20900.1 vs. uniprot
Match: D8LAZ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ8_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 9.220e-45
Identity = 85/112 (75.89%), Postives = 97/112 (86.61%), Query Frame = 0 
Query:    1 MNNATLHTLVLAVKAHQRQERRQAIASG-AELPD-GLVAFAPKTKKEMSRLIRSIQGRRLEYGKEGKRPLWWPKNCPWDSNKPLSTMKHAEVTSVFKAMVREGLLSDADVNG 110
            MNNATLH LV+AVKAHQRQERR+A+ASG   +PD GL+  APKTKKEMSRLIRSIQGRRL+YGK+GKRP WWP + PWDS++PLSTMKH EVTS+FKAM+REGLL D D  G
Sbjct:  248 MNNATLHKLVVAVKAHQRQERREALASGNGFVPDSGLLVCAPKTKKEMSRLIRSIQGRRLQYGKDGKRPPWWPADAPWDSDRPLSTMKHGEVTSIFKAMIREGLLFDTDSGG 359
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9912.20900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LAZ8_ECTSI9.220e-4575.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..442
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9912contigS-firma_M_contig9912:331..2714 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9912.20900.1mRNA_S-firma_M_contig9912.20900.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9912 139..3754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9912.20900.1 ID=prot_S-firma_M_contig9912.20900.1|Name=mRNA_S-firma_M_contig9912.20900.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=443bp
MNNATLHTLVLAVKAHQRQERRQAIASGAELPDGLVAFAPKTKKEMSRLI
RSIQGRRLEYGKEGKRPLWWPKNCPWDSNKPLSTMKHAEVTSVFKAMVRE
GLLSDADVNGTSSSCKTARRSATGKNNGSANDHDNDRAVDSQAEYGGEAT
SDNDGQADGGGGGGDRHQSASDSSSERSGSSSFWDGDDDGGAVGDVIGEV
SPLCDTIDPDSAEDLPLMVPVQRGVPGLMPPSKQQQRLRQHHLAQQQQQQ
QEEDHQQHLQYLQQQQLLQQQQQQQHFQQQSVQRPLEFHGGGLDLKPPPG
APATATFPGWTQPQPLGKPSSSSSFFSSSSQATVGGFLVAGQVGTSPAST
GAPSLLESVPCSPAKLPPAAATPKIDEESAWQGRTLFEELLFGVGGGLNG
NGPQQSCGFQGEDSSGTERMLGFSPLDDDLVFAVGGQGKPLQ*
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