prot_S-firma_M_contig9896.20876.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig9896.20876.1
Unique Name	prot_S-firma_M_contig9896.20876.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	291

Homology

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BLAST of mRNA_S-firma_M_contig9896.20876.1 vs. uniprot
Match: D7FXJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ0_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 2.860e-79
Identity = 178/291 (61.17%), Postives = 195/291 (67.01%), Query Frame = 0

Query:    1 MMAGASERRRVLGLGGLPGLLAGMCEGTPTLRSPLRGLDSGGLVAFLHASEQYQLALPLVGLAVEWQWRLKIGDPPPPFSRRVVPETAVLTAIARGFLYSAEAAARSEGGGGLSAGPLLDQATKWYIKASQALRASLFRPGXXXXXXXXXXXXXEVVVAHFEDALEEVERVRDRVKRDGGSGGRPRMGMGIGMVVGAGAARGGAAEEGGEAGEDFGGRGAVNALELARAALAAERCVLRVAVGTAEAEQXXXXXXXXARLCRLVFKHASEALSFDEAFAAVCENPVDQQRK 291
            M   AS R R LGLGG+P LLAGMCEGT  LRS L GLDSGGLV+FLHASEQYQLALPLVGLAVEWQWR+K+G        R  P TAVLT+IARGFLYSAEAAARSEGGG  S+GPLLD+ATKWY+K+SQALRA L RPG             E VV HFE AL EVERVR+ ++R                                   EDFGGRG VNALELARAAL  ER  LR   G+A  + XXXXX   ARLC+LVFKHASEAL F EAF AVC+NP+DQQRK
Sbjct: 1006 MSTEASTRGRQLGLGGVPSLLAGMCEGT--LRSHLTGLDSGGLVSFLHASEQYQLALPLVGLAVEWQWRMKVGXXXXXXXHRPEPHTAVLTSIARGFLYSAEAAARSEGGGSSSSGPLLDRATKWYLKSSQALRAQLLRPGGGGGHNQA-----ESVVEHFEGALLEVERVREGLRRXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXEDFGGRGPVNALELARAALETER-ELR---GSAGDQXXXXXXQRQARLCQLVFKHASEALCFREAFDAVCDNPIDQQRK 1282

[Close]

BLAST of mRNA_S-firma_M_contig9896.20876.1 vs. uniprot
Match: A0A6H5KLL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL3_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 4.490e-72
Identity = 162/282 (57.45%), Postives = 182/282 (64.54%), Query Frame = 0

Query:   10 RVLGLGGLPGLLAGMCEGTPTLRSPLRGLDSGGLVAFLHASEQYQLALPLVGLAVEWQWRLKIGDPPPPFSRRVVPETAVLTAIARGFLYSAEAAARSEGGGGLSAGPLLDQATKWYIKASQALRASLFRPGXXXXXXXXXXXXXEVVVAHFEDALEEVERVRDRVKRDGGSGGRPRMGMGIGMVVGAGAARGGAAEEGGEAGEDFGGRGAVNALELARAALAAERCVLRVAVGTAEAEQXXXXXXXXARLCRLVFKHASEALSFDEAFAAVCENPVDQQRK 291
            R LGLGG+P LLAGMCEGT  LRS L  LDSGGL++FLHA++QYQLALPLVGLAVEWQWR+K+            P  AVLT+IARGFLYSAEAAARSEGGG  S+G LLD+ATKWY+K+SQALRA L R               E+VV HFEDAL EVERVR+ +KR                                   EDFGGRG VNALELARAAL  ER  LR   G+A  +Q        ARLC+LVFKHASEAL F EAF AVC+NP+DQQRK
Sbjct:  607 RQLGLGGVPSLLAGMCEGT--LRSHLTDLDSGGLISFLHANQQYQLALPLVGLAVEWQWRMKVE-----------PHAAVLTSIARGFLYSAEAAARSEGGGSPSSGSLLDRATKWYLKSSQALRAQLLRSSGGGGDNQA-----ELVVKHFEDALLEVERVREGLKRXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXEDFGGRGPVNALELARAALETER-ELR---GSAGGQQPHQPHQRKARLCQLVFKHASEALCFREAFDAVCDNPIDQQRK 863

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig9896.20876.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig9896.20876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FXJ0_ECTSI	2.860e-79	61.17	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KLL3_9PHAE	4.490e-72	57.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..178
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 11..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..291
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..10
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 23..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig9896	contig	S-firma_M_contig9896:573..3758 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig9896.20876.1	mRNA_S-firma_M_contig9896.20876.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig9896 555..3758 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig9896.20876.1 ID=prot_S-firma_M_contig9896.20876.1|Name=mRNA_S-firma_M_contig9896.20876.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=291bp
MMAGASERRRVLGLGGLPGLLAGMCEGTPTLRSPLRGLDSGGLVAFLHAS
EQYQLALPLVGLAVEWQWRLKIGDPPPPFSRRVVPETAVLTAIARGFLYS
AEAAARSEGGGGLSAGPLLDQATKWYIKASQALRASLFRPGGGGGGGSSG
GGGAEVVVAHFEDALEEVERVRDRVKRDGGSGGRPRMGMGIGMVVGAGAA
RGGAAEEGGEAGEDFGGRGAVNALELARAALAAERCVLRVAVGTAEAEQR
QQQQQRQARLCRLVFKHASEALSFDEAFAAVCENPVDQQRK