prot_S-firma_M_contig9882.20869.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9882.20869.1
Unique Nameprot_S-firma_M_contig9882.20869.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length181
Homology
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BLAST of mRNA_S-firma_M_contig9882.20869.1 vs. uniprot
Match: A0A6H5KQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH9_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 1.680e-37
Identity = 95/170 (55.88%), Postives = 105/170 (61.76%), Query Frame = 0 
Query:    1 MSSLCHEVSRAGWRVGGG--LSSTGSVSSASA--DDADGA------GKLWRGQQKALVEAALEEGVRMVHVPGLEGSASAAS---------------GDGGGSGASPEGSSWPGPSGYSFACWMRFNPPGGGXXXXXXXXXTGLSGLPEDMRSWSEDAGKVAVAGTAVGA 145
            MSSLCHEVSR+GWR  GG  LSS+G  SS++A  D ADGA      GKLWRGQQK LVEAALEEGVR VHVPGLEG ++ A+               GDG         +SWPGPSGYSFACWMRFNPP GG          G S  PEDM SW+ED G+ A  G A  A
Sbjct: 1666 MSSLCHEVSRSGWRTAGGAGLSSSGPASSSAAGEDAADGAAGAAGSGKLWRGQQKVLVEAALEEGVRFVHVPGLEGGSAGAAXXXXXXXXXXXXXXLGDG---------TSWPGPSGYSFACWMRFNPPNGGGSGARSGGDAGNS-PPEDMESWNEDVGRAAAIGAAATA 1825
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BLAST of mRNA_S-firma_M_contig9882.20869.1 vs. uniprot
Match: D8LI42_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI42_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 4.050e-30
Identity = 87/174 (50.00%), Postives = 93/174 (53.45%), Query Frame = 0 
Query:    1 MSSLCHEVSRAGWRVGGG--LSSTGSVSSASADDADGAG------------KLWRGQQKALVEAALEEGVRMVHVPGLEGSASAAS---------------GDGGGSGASPEGSSWPGPSGYSFACWMRFNPPGGGXXXXXXXXXTGLSGLPEDMRSWSEDAGKVAVAGTAVGA 145
            MSSLCHEVSR+GWR  GG  LSS+G                          KLWRGQQKALVEAALEEGVR VHVPGLEG  +                  GDG         +SWPGPSGYSFACWMRFNPPGG X         G S  PEDM SW+ED G+ A  G A  A
Sbjct: 1612 MSSLCHEVSRSGWRTAGGAGLSSSGPXXXXXXXXXXXXXXXXXXXXXXXXXKLWRGQQKALVEAALEEGVRFVHVPGLEGGGAXXXXXXXXXXXXXXXXXLGDG---------TSWPGPSGYSFACWMRFNPPGGXXSGARSGGDAGTS-PPEDMESWNEDVGRAAAFGAAATA 1775
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9882.20869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQH9_9PHAE1.680e-3755.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI42_ECTSI4.050e-3050.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9882contigS-firma_M_contig9882:1962..2504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9882.20869.1mRNA_S-firma_M_contig9882.20869.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9882 1962..2504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9882.20869.1 ID=prot_S-firma_M_contig9882.20869.1|Name=mRNA_S-firma_M_contig9882.20869.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=181bp
MSSLCHEVSRAGWRVGGGLSSTGSVSSASADDADGAGKLWRGQQKALVEA
ALEEGVRMVHVPGLEGSASAASGDGGGSGASPEGSSWPGPSGYSFACWMR
FNPPGGGGGSGGAGGGTGLSGLPEDMRSWSEDAGKVAVAGTAVGAAVAAA
AAAAAAAAGGGAGGRKSAEVSESDVVDMSGE
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