prot_S-firma_M_contig9881.20867.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9881.20867.1
Unique Nameprot_S-firma_M_contig9881.20867.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length177
Homology
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: D7FSH5_ECTSI (Pheophorbide a oxygenase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH5_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 3.420e-111
Identity = 152/177 (85.88%), Postives = 158/177 (89.27%), Query Frame = 0
Query:    1 GFQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARPEAREAAQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDLDLASGDFGGNWYARDLAYGTDSLIENLAGEA 177
            GFQW RQWYPVAVMRDLEARDPR PYPVQL+GE LVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQ++GRLQCIYHGWEFEGDGKCGSIPQA P +RE AQNSKRACAT IPTK+VE KLWLWPD SPEGVKESE V PATVP LD  SGDFGGNWY R LAYG D+LIENLA  A
Sbjct:   39 GFQWRRQWYPVAVMRDLEARDPRMPYPVQLMGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEGDGKCGSIPQATPGSRETAQNSKRACATAIPTKVVEGKLWLWPDPSPEGVKESETVPPATVPGLDFGSGDFGGNWYCRKLAYGFDTLIENLADPA 215          
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: A0A6H5KID3_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KID3_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 1.960e-100
Identity = 138/179 (77.09%), Postives = 156/179 (87.15%), Query Frame = 0
Query:    2 FQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARPEAREAAQNSKR---ACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDLDLASGDFGGNWYARDLAYGTDSLIENLAGEA 177
            F+W RQWYPV VMRDLEARDPRQPYPV+LLGE+LVVWKDPKD GWKAF D+CPHRWAPLSEGRV+Q+TGRL CIYHGWEFEGDGKCGSIPQA P+AR+ AQNS R   ACATV+PT++V+ KLW+WPDSSPEGVK SE V P  VP+LDL +GD+G NWYARDLAYG D+L+ENL   A
Sbjct:  121 FEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQANPDARDIAQNSNRQLMACATVLPTQVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWGSNWYARDLAYGFDTLVENLVDPA 299          
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: A0A835YYS4_9STRA (Pheophorbide a oxygenase, putative chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYS4_9STRA)

HSP 1 Score: 186 bits (472), Expect = 5.030e-53
Identity = 92/176 (52.27%), Postives = 116/176 (65.91%), Query Frame = 0
Query:    2 FQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARPEAREAAQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDLDLASGDFGGNWYARDLAYGTDSLIENLAGEA 177
            F + R W+PVA+  DL+   P  P  V+LLGEALV+W+D  +  W+A  DRCPHR APLSEG +  KTG L C YHGWEF+GDG C +IPQA  +A  A   S+RACA  +P +I    +W+WPD+SPEG+ ES+  +PA V D+DL   D+ G WY RD  Y  D LIENL   A
Sbjct:   76 FNYWRAWWPVAIAEDLQ---PDVPERVELLGEALVLWRD-SNKQWRAAVDRCPHRMAPLSEGIIHPKTGNLMCTYHGWEFDGDGTCTNIPQATTDAAAA---SRRACAQSVPVQIATGLVWVWPDTSPEGLAESKIKRPAIVADMDLP--DYNGYWYVRDQPYSYDVLIENLGDPA 242          
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: A0A4D9D3Q0_9STRA (Rieske domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3Q0_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.570e-52
Identity = 87/174 (50.00%), Postives = 114/174 (65.52%), Query Frame = 0
Query:    4 WARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARPEAREAAQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDLDLASGDFGGNWYARDLAYGTDSLIENLAGEA 177
            W RQWYP+A + DL   DP +P  V+LLG+  V+W D  D  W AF D+CPHR APLSEGR+D++ G LQC YHGW F G G C +IPQA PE +  A+ S RACA  +P  + +  +WLWPD+SP+G++ S    P+TVP+L   +    G W  RDL YG D+L+EN+   A
Sbjct:  102 WWRQWYPMAFLDDL---DPARPTQVELLGKLFVIWAD-HDKTWHAFEDQCPHRLAPLSEGRIDER-GNLQCAYHGWSFSGQGGCVNIPQAEPEIKVVAERSGRACAKAVPLLVAQGMVWLWPDNSPDGMEASRSQLPSTVPELHDPAF-IRGAWVTRDLMYGYDTLVENVVDPA 269          
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: A0A4D9D2T3_9STRA (Rieske domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2T3_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.970e-49
Identity = 86/182 (47.25%), Postives = 113/182 (62.09%), Query Frame = 0
Query:    2 FQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWK-----DPKDGG---WKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARPEARE---AAQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDLDLASGDFGGNWYARDLAYGTDSLIEN 172
            F W +QWYPVA+ RD++   P +   V LLG  LV+W+     D K G    W+ F DRCPHR APLSEGR+D +TG LQC YHGWEF G G+C  IPQ  PE  +    A  S+RACAT +PT   +  +W+WPD+S EGV+ S+ V+P  + D+D     +      RD+ YG D+L+EN
Sbjct:   28 FDWWKQWYPVALTRDIDGAVPTK---VMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQEEAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLMKDVDEKEMSY--LVVCRDMPYGFDTLLEN 204          
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: I0YYD6_COCSC (ISP domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YYD6_COCSC)

HSP 1 Score: 169 bits (428), Expect = 4.700e-47
Identity = 84/182 (46.15%), Postives = 108/182 (59.34%), Query Frame = 0
Query:    2 FQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARP-EAREAAQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDL---DLASGDFGG------NWYARDLAYGTDSLIENL 173
            F WARQWYP+A + DL   DP +P+ ++LLG+ LV+W D +   W AF DRCPHR APLSEGR++   G L C YHGW F GDG C  IPQA    A + A +S R+CA V PT++ +  +W+W D S     ES  + P  +P+L   D      GG      + YARDL Y  D L+EN 
Sbjct:   46 FDWARQWYPLAFVEDL---DPGRPHAMELLGKRLVIWYDSRQHKWTAFEDRCPHRLAPLSEGRIEPSDGTLMCSYHGWRFRGDGACTRIPQALDARAEDTACSSGRSCAAVHPTQVSQGYVWVWGDCSASAAAESALMPPLLIPELSPDDTGQATDGGPVISAASRYARDLPYSWDVLVENF 224          
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: A0A8J9SEL5_9CHLO (Protein TIC 55, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SEL5_9CHLO)

HSP 1 Score: 170 bits (431), Expect = 6.070e-47
Identity = 86/182 (47.25%), Postives = 106/182 (58.24%), Query Frame = 0
Query:    2 FQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARP-EAREAAQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDLD---LASGDFGG------NWYARDLAYGTDSLIENL 173
            F WARQWYP+A + DL   DP  P+ ++LLG+ LV+W D +   W AF DRCPHR APLSEGR++   G L C YHGW F GDG C  IPQA   +A +AA  S R+CA V PT++ +  LW+W D     V ES    P  +P+LD         GG        YARDL Y  D L+EN 
Sbjct:  104 FDWARQWYPLAFVEDL---DPAIPHAMELLGKRLVIWYDSQQQKWTAFEDRCPHRLAPLSEGRIEPSDGTLMCSYHGWRFRGDGACTKIPQALDAKAEQAACTSGRSCAAVHPTQVAQGYLWVWGDCGGGAVAESAAAAPLLIPELDPNDTGQASDGGPVIAAATRYARDLPYSWDVLVENF 282          
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: I0YYC8_COCSC (Rieske domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YYC8_COCSC)

HSP 1 Score: 169 bits (427), Expect = 1.750e-46
Identity = 84/183 (45.90%), Postives = 110/183 (60.11%), Query Frame = 0
Query:    2 FQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARP-EAREAAQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDLDLASGDF----------GGNWYARDLAYGTDSLIENL 173
            F WARQWYP+A + DL   DP +P+ ++LLG+ LV+W D +   W AF DRCPHR APLSEGR++   G L C YHGW F GDG C  IPQA    A +AA +S R+CA V PT++ +  L +W ++  E  +E+ R  P  +P+LD  + D            G  Y RDL Y  D L+ENL
Sbjct:   84 FVWARQWYPLAFVEDL---DPGRPHAMELLGKRLVIWYDSRQQKWTAFEDRCPHRLAPLSEGRIEPSDGTLMCSYHGWRFRGDGACTRIPQALDARAEDAACSSGRSCAAVHPTQVRQGFLHVWGEAGAEAAEEAARRPPVLIPELDPDAADAVMRDGSPTLDSGKRYIRDLPYSYDFLVENL 263          
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: A0A8J9WJS8_9CHLO (Protein TIC 55, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WJS8_9CHLO)

HSP 1 Score: 169 bits (427), Expect = 1.860e-46
Identity = 84/182 (46.15%), Postives = 112/182 (61.54%), Query Frame = 0
Query:    2 FQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARP-EAREAAQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDLDLASG--DFGGNW-------YARDLAYGTDSLIENL 173
            F WA+QWYP+A + DL A+    P+PV+LL + LV+W D + G W+ F D+CPHR APLSEGR++   G L C YHGW F+GDGKC  IPQ+   +A+ AA  + R+CA   PTK+++ ++W+W D  P    +S  VQPA VP+L +  G  D  G         Y RD  Y  D L ENL
Sbjct:   87 FDWAKQWYPMAFVHDLNAK---VPHPVELLSQRLVLWCDGQ-GEWRCFQDKCPHRLAPLSEGRIEPSDGTLMCSYHGWRFDGDGKCMDIPQSLDAKAKAAACTNPRSCAVSHPTKVLQGRVWVWGDGGPRAFIDSAAVQPAYVPELAMEEGIRDASGAEAVSFAVPYTRDFPYAWDVLAENL 264          
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Match: A0A7S2GKS6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2GKS6_9DINO)

HSP 1 Score: 162 bits (409), Expect = 3.520e-46
Identity = 81/175 (46.29%), Postives = 107/175 (61.14%), Query Frame = 0
Query:    2 FQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARPEAREAAQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKES---ERVQPATVPDLDLASGDFGGNWYARDLAYGTDSLIENL 173
            F W + WYP+AV++DL   DP +P  ++LLG  LV WK  KDG W+AF DRCPHR  PLSEGRV+   G L C YHGW FEGDGK  ++PQA  +  E   ++ RACA+V PT++ +  LW+W + SP+   ES   E + P    D  L      G W  RD+ YG +  +EN+
Sbjct:   29 FDWKKSWYPMAVIQDL---DPSKPTKLELLGHELVAWKA-KDGEWRAFEDRCPHRNVPLSEGRVEA-DGTLMCSYHGWRFEGDGKISALPQAEEKDLERILSNPRACASVRPTRVQQGVLWVWGECSPDAALESALQEPILPEEASDPALEGRVSFGAWSHRDIPYGWEVAMENV 198          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9881.20867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSH5_ECTSI3.420e-11185.88Pheophorbide a oxygenase, putative chloroplast n=1... [more]
A0A6H5KID3_9PHAE1.960e-10077.09Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835YYS4_9STRA5.030e-5352.27Pheophorbide a oxygenase, putative chloroplast n=1... [more]
A0A4D9D3Q0_9STRA2.570e-5250.00Rieske domain-containing protein n=2 Tax=Monodopsi... [more]
A0A4D9D2T3_9STRA5.970e-4947.25Rieske domain-containing protein n=2 Tax=Monodopsi... [more]
I0YYD6_COCSC4.700e-4746.15ISP domain-containing protein n=1 Tax=Coccomyxa su... [more]
A0A8J9SEL5_9CHLO6.070e-4747.25Protein TIC 55, chloroplastic n=1 Tax=Coccomyxa sp... [more]
I0YYC8_COCSC1.750e-4645.90Rieske domain-containing protein n=1 Tax=Coccomyxa... [more]
A0A8J9WJS8_9CHLO1.860e-4646.15Protein TIC 55, chloroplastic n=1 Tax=Coccomyxa sp... [more]
A0A7S2GKS6_9DINO3.520e-4646.29Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 7..95
e-value: 6.9E-20
score: 70.8
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 8..95
score: 26.65
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 3..149
e-value: 2.9E-36
score: 126.0
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 3..131
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 2..174
NoneNo IPR availablePANTHERPTHR21266:SF47coord: 2..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9881contigS-firma_M_contig9881:1035..3567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9881.20867.1mRNA_S-firma_M_contig9881.20867.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9881 1035..3567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9881.20867.1 ID=prot_S-firma_M_contig9881.20867.1|Name=mRNA_S-firma_M_contig9881.20867.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=177bp
GFQWARQWYPVAVMRDLEARDPRQPYPVQLLGEALVVWKDPKDGGWKAFA
DRCPHRWAPLSEGRVDQKTGRLQCIYHGWEFEGDGKCGSIPQARPEAREA
AQNSKRACATVIPTKIVEEKLWLWPDSSPEGVKESERVQPATVPDLDLAS
GDFGGNWYARDLAYGTDSLIENLAGEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S