prot_S-firma_M_contig986.20849.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig986.20849.1
Unique Nameprot_S-firma_M_contig986.20849.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length323
Homology
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BLAST of mRNA_S-firma_M_contig986.20849.1 vs. uniprot
Match: D7G479_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G479_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 1.390e-115
Identity = 216/322 (67.08%), Postives = 231/322 (71.74%), Query Frame = 0 
Query:   11 RGRKRKRQRVSFAAGELLEEVKLFHMAKPVNPSVPPPAVDDAGEEDAASQPGLALLGLFGVESPSPXXXXXXXXXXTTLA------SSTTTHAAVDAAAS-NGASQLRSAAVSAQDTSE--GXXXXXXXXXXXXDSGGVEG-TGTGRAAGGSKLFKGFEKTETVVRXXXXXXXXXXXXXTPPLPPADEGAHLTHRYPKDIWPGHKPPNHTAGVGEANGAGGEGAEEEQLEFFCDACDETIPSGVERMECAVCPDEFCLCHGCYDEGEVLDKRHKHELLPSAAPFHVTRAATSAEAALQAAKALHVTEAQDGEGVPYDDDDLG 322
            RGRKRKRQ VS+AA ELLEEVKLFHMAKPVNPS+PPP VDD GE DAASQPGLALLGL GVES S            + +      SSTT HA V  A   NG      +  SAQ  S+  G              GG EG   TGR  G S+LFKGFEKTETVVRXXXXXXXXXXXXX   +PP+ EG H+THRYPKDIWPGHKPPNH  G GE    G    +EEQLEFFCD CDETIPSGVERMECAVCPDEFCLCH CYDEGEVLDKRHKHELLPSAAPFHVTRAA SA AAL+AAKALHV EA  G+G+ YD+ DLG
Sbjct:   12 RGRKRKRQ-VSWAAAELLEEVKLFHMAKPVNPSIPPPVVDDGGE-DAASQPGLALLGLLGVESSSSLPASTSSFSAASPSPASVDSSSTTFHAPVGGAGIVNGGDNSHPSTTSAQLPSDVQGGSFVGSSSHSGDGPGGTEGGPATGRTVGASRLFKGFEKTETVVRXXXXXXXXXXXXXXXXIPPSGEGEHVTHRYPKDIWPGHKPPNHIVG-GEGANDGERAGDEEQLEFFCDGCDETIPSGVERMECAVCPDEFCLCHACYDEGEVLDKRHKHELLPSAAPFHVTRAAPSAAAALEAAKALHVAEAHHGQGLAYDEADLG 330
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig986.20849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G479_ECTSI1.390e-11567.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.90coord: 226..279
e-value: 4.5E-6
score: 28.4
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 229..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig986contigS-firma_M_contig986:20709..23220 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig986.20849.1mRNA_S-firma_M_contig986.20849.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig986 20065..23291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig986.20849.1 ID=prot_S-firma_M_contig986.20849.1|Name=mRNA_S-firma_M_contig986.20849.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=323bp
MASEVGSSGDRGRKRKRQRVSFAAGELLEEVKLFHMAKPVNPSVPPPAVD
DAGEEDAASQPGLALLGLFGVESPSPSPSAAASPSPTTLASSTTTHAAVD
AAASNGASQLRSAAVSAQDTSEGQGGGGSSSSSGGDSGGVEGTGTGRAAG
GSKLFKGFEKTETVVRRKKQVAPPPPPPETPPLPPADEGAHLTHRYPKDI
WPGHKPPNHTAGVGEANGAGGEGAEEEQLEFFCDACDETIPSGVERMECA
VCPDEFCLCHGCYDEGEVLDKRHKHELLPSAAPFHVTRAATSAEAALQAA
KALHVTEAQDGEGVPYDDDDLG*
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