prot_S-firma_M_contig9857.20843.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9857.20843.1
Unique Nameprot_S-firma_M_contig9857.20843.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length124
Homology
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: A0A396ZVN4_9STRA (RNase H type-1 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZVN4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 9.610e-30
Identity = 53/110 (48.18%), Postives = 77/110 (70.00%), Query Frame = 0
Query:    8 TSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQNAVR 117
            T+NRAE+ AA++A ++A++ DP + +PL IFSDSMLL+ SMT W+  W  K+WRKADGK +KN+DL+Q L     +R   + HV+AHT+  D  S WN +AD  A++  +
Sbjct:    2 TNNRAEYLAALEALKRANVQDPSQSQPLFIFSDSMLLIRSMTEWLPTWMSKNWRKADGKEVKNVDLLQQLTLTRGRRRVLWRHVKAHTNQRDWKSTWNDKADHLARSTAQ 111          
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: A0A397C302_9STRA (RNase H type-1 domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C302_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.500e-29
Identity = 54/117 (46.15%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    1 LDPSSARTSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQNAVR 117
            L  ++  T+NRAE+ AA++A ++A++ DP + +PL IFSDSMLL+ SMT W+  W  K+WRKADGK +KN+DL+Q L     +R   + HV+AHT+  D  S WN +AD  A++  +
Sbjct:   66 LQAAATATNNRAEYLAALEALKRANVQDPSQSQPLFIFSDSMLLIRSMTEWLPTWMSKNWRKADGKEVKNVDLLQQLTHTRGRRRVLWRHVKAHTNQRDWKSTWNDKADHLARSTAQ 182          
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: A0A1V9YZU6_9STRA (Ribonuclease H n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZU6_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.640e-28
Identity = 56/117 (47.86%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    1 LDPSSARTSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQNAVR 117
            L   +A T+NRAE+ AA++A ++A+L DPE+ +PL IFSDSMLL+ SMT W++ W+   WRKA+G+ +KN DL++ L+     R   + HV+AHT+  D  S WN +ADQ AQ   R
Sbjct:  185 LPSDAAATNNRAEYLAALEAMKRANLQDPEKVQPLFIFSDSMLLIKSMTEWLAGWKRNHWRKANGEPVKNADLLKRLEDTQGTRRILWRHVKAHTNKKDWESVWNDKADQLAQATAR 301          
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: A0A3M6VUM9_9STRA (Ribonuclease H n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUM9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.760e-28
Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    8 TSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQNAV 116
            T+NRAE+ AA++A ++A++ DP+  RPL+IFSDSMLL+ SMT WV  W+  +WRK+DGK ++N DL++ L  +   R   + HV+AHT   D  S WN  AD  A+NA 
Sbjct:  109 TNNRAEYMAALEAMKRANVEDPDGSRPLYIFSDSMLLIRSMTEWVGTWQKNNWRKSDGKPVRNHDLLELLVAEKGNRCIRWNHVKAHTGKKDWKSKWNDVADHAARNAA 217          
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: A0A3M6VWQ6_9STRA (Ribonuclease H n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VWQ6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.170e-27
Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    8 TSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQNAV 116
            T+NRAE+ AA++A ++A++ DP+  RPL+IFSDSMLL+ SMT WV  W+  +WRK+DGK ++N DL++ L  +   R   + HV+AHT   D  S WN  AD  A+NA 
Sbjct:  230 TNNRAEYMAALEAMKRANVEDPDGSRPLYIFSDSMLLIRSMTEWVGTWQKNNWRKSDGKLVRNHDLLELLVAEKGNRCIRWNHVKAHTGKKDWKSKWNDVADHAARNAA 338          
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: D0NEW7_PHYIT (Ribonuclease H n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NEW7_PHYIT)

HSP 1 Score: 110 bits (276), Expect = 5.530e-27
Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 0
Query:    8 TSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQNAVRLDPGK 122
            T+NRAE+ AA++A ++A++ DPER R L+IFSDSMLL+ SMT WV  W+  +W K+DG  ++N DL++ L  +   R   +THV+AHT   D  S WN  AD  A+NA     GK
Sbjct:  203 TNNRAEYMAALEAMKRANVEDPERSRMLYIFSDSMLLIRSMTEWVGTWQKNNWNKSDGTPVQNRDLLELLVAEKGSRRIRWTHVKAHTRKQDWRSKWNDVADNAARNAALSVGGK 317          
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: A0A485KN86_9STRA (Aste57867_9408 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN86_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.300e-26
Identity = 53/111 (47.75%), Postives = 76/111 (68.47%), Query Frame = 0
Query:    3 PSSARTSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQ 113
            PS+  T+NRAE+ AA++A ++A++ DP++  PL IFSDSMLL+ SMT W+  W+   WRKADG+ +KN+DL+Q L      R   + HV+AHT+  D  S WN + DQ A+
Sbjct:  334 PSNQATNNRAEYLAALEALKRANVEDPQQAAPLFIFSDSMLLIRSMTEWLPTWQKNQWRKADGEPVKNVDLLQQLTATRGARRVLWQHVKAHTNRRDWKSIWNDKVDQLAR 444          
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: A0A397BHE4_9STRA (RNase H type-1 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BHE4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.420e-26
Identity = 53/118 (44.92%), Postives = 80/118 (67.80%), Query Frame = 0
Query:    1 LDPSSARTSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQNAVRL 118
            L  ++  T+NRAE+ AA++A ++A++ DP + +PL IFSDSMLL+ SMT W+  W   +WRKADGK +KN+DL+Q L     +R   + HV+AHT+  D  S WN +AD+ A++  + 
Sbjct:  953 LQAAATATNNRAEYLAALEALKRANVQDPSQSQPLFIFSDSMLLIRSMTEWLPTWMSNNWRKADGKEVKNVDLLQQLTHTRGRRRVLWRHVKAHTNQRDWKSTWNDKADRLARSTAQF 1070          
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: A0A6G0XGN6_9STRA (Ribonuclease H n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGN6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.260e-26
Identity = 51/109 (46.79%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    8 TSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQNAV 116
            T+NRAE+ AA++A ++A+L DP  +RPL+IFSDSMLL+ SMT W+  W+  +W K+DG+ +KN+DL++ L +    R   + HV+AHT+  D  S WN +ADQ A++  
Sbjct:  279 TNNRAEYLAALEALKRANLEDPNIERPLYIFSDSMLLIRSMTEWLPTWQKNNWIKSDGEAVKNVDLLKQLTEARGNRRVIWRHVKAHTNKRDWKSIWNDKADQLARSTA 387          
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Match: A0A075AN21_ROZAC (Ribonuclease H n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AN21_ROZAC)

HSP 1 Score: 107 bits (266), Expect = 3.440e-26
Identity = 54/113 (47.79%), Postives = 76/113 (67.26%), Query Frame = 0
Query:    5 SARTSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTIWVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDHNSFWNARADQTAQNAVR 117
            S +T+NRAE+ AAI+A  +A+  DP + +PL+I+SDSMLL+ SMT WV+ W  K WRK+DG  + N DL++ L +   KR   + HV+AHT   +  S WN +AD+ AQ A R
Sbjct:  125 SKKTNNRAEYLAAIEAMRRANKEDPGQLKPLYIYSDSMLLIRSMTEWVNGWIRKGWRKSDGTPVLNKDLLEELVETRGKRRIIWRHVKAHTGKKNWESIWNDKADRFAQMAAR 237          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9857.20843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A396ZVN4_9STRA9.610e-3048.18RNase H type-1 domain-containing protein (Fragment... [more]
A0A397C302_9STRA2.500e-2946.15RNase H type-1 domain-containing protein n=5 Tax=A... [more]
A0A1V9YZU6_9STRA1.640e-2847.86Ribonuclease H n=1 Tax=Achlya hypogyna TaxID=12027... [more]
A0A3M6VUM9_9STRA2.760e-2848.62Ribonuclease H n=1 Tax=Peronospora effusa TaxID=54... [more]
A0A3M6VWQ6_9STRA3.170e-2748.62Ribonuclease H n=2 Tax=Peronospora effusa TaxID=54... [more]
D0NEW7_PHYIT5.530e-2747.83Ribonuclease H n=2 Tax=Phytophthora infestans TaxI... [more]
A0A485KN86_9STRA2.300e-2647.75Aste57867_9408 protein n=1 Tax=Aphanomyces stellat... [more]
A0A397BHE4_9STRA2.420e-2644.92RNase H type-1 domain-containing protein n=4 Tax=A... [more]
A0A6G0XGN6_9STRA3.260e-2646.79Ribonuclease H n=2 Tax=Aphanomyces euteiches TaxID... [more]
A0A075AN21_ROZAC3.440e-2647.79Ribonuclease H n=1 Tax=Rozella allomycis (strain C... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF00075RNase_Hcoord: 6..116
e-value: 5.2E-17
score: 62.4
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 1..117
score: 18.563
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..119
e-value: 3.5E-28
score: 100.5
NoneNo IPR availablePANTHERPTHR10642:SF21RIBONUCLEASE HIcoord: 7..117
NoneNo IPR availablePANTHERPTHR10642RIBONUCLEASE H1coord: 7..117
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9857contigS-firma_M_contig9857:2247..2618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9857.20843.1mRNA_S-firma_M_contig9857.20843.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9857 2247..2618 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9857.20843.1 ID=prot_S-firma_M_contig9857.20843.1|Name=mRNA_S-firma_M_contig9857.20843.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=124bp
LDPSSARTSNRAEFFAAIKAGEQADLIDPERQRPLHIFSDSMLLVNSMTI
WVSAWRLKSWRKADGKTIKNLDLIQTLDKQASKRTTEYTHVRAHTDGTDH
NSFWNARADQTAQNAVRLDPGKR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
IPR002156RNaseH_domain