prot_S-firma_M_contig9850.20841.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9850.20841.1
Unique Nameprot_S-firma_M_contig9850.20841.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length116
Homology
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6H5K5P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P8_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.170e-20
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    6 GRAPARCTRTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRLATSEVWRT 96
            G + ARC R QLPL +AF ITI++SQG +LL+  +DIG+ E +DGQ+FTA SR RT++ +LLE  SL+R L+IG S SF  RL   +  RT
Sbjct:   17 GTSIARCFRMQLPLLLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRT 107          
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 4.160e-20
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    6 GRAPARCTRTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRLATSEVWRT 96
            G + ARC R QLPL +AF ITI++SQG +LL+  +DIG+ E +DGQ+FTA SR RT++ +LLE  SL+R L+IG S SF  RL   +  RT
Sbjct:  180 GTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRT 270          
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 5.320e-20
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    6 GRAPARCTRTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRLATSEVWRT 96
            G + ARC R QLPL +AF ITI++SQG +LL+  +DIG+ E +DGQ+FTA SR RT++ +LLE  SL+R L+IG S SF  RL   +  RT
Sbjct:  739 GTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRT 829          
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 5.440e-20
Identity = 50/87 (57.47%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    3 GARGRAPARCTRTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDV-SLDRLLRIGQSNSFPLRL 88
            GA   A  RC RTQLPL +AF ITIH+SQG +LL+  +DIG +E++DGQTFTALSR R +D +LL+ +  L+RL RIG S +F  RL
Sbjct: 1550 GANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQPLFCLERLQRIGTSRTFGARL 1636          
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 3.080e-19
Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 0
Query:    6 GRAPARCTRTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRLATSEVWRT 96
            G + ARC R QLPL +AF ITI++S G +LL+  +DIG+ E +DGQ+FTA SR RT++ +LLE  SL+R L+IG S SF  RL   +  RT
Sbjct:  335 GTSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRT 425          
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.370e-14
Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 0
Query:   14 RTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRL 88
            RTQLPL + +AIT+H+SQGQ+L KAV+D+G +E   G TF  LSR + +  L++E +S DR+  +G S +   RL
Sbjct:   15 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARL 89          
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6S7GL72_PARCT (ATP-dependent DNA helicase PIF1 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GL72_PARCT)

HSP 1 Score: 75.9 bits (185), Expect = 2.430e-14
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 0
Query:   13 TRTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRLATSE 92
            +R Q+PL + +A+TIH+SQGQ+L KAVVD+G  E+  G TF A SRVR+I  ++ E ++ DRL  IG+S +   RL   E
Sbjct:  142 SRQQVPLRLRYAMTIHKSQGQTLTKAVVDLGKGEKVAGCTFVATSRVRSIHDIVFESMTFDRLKVIGRSKNMQKRLKAEE 221          
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.910e-14
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 0
Query:   14 RTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRLA----------TSEVWRTPLGVAAVCRRW 107
            RTQLPL + +AIT+H+SQGQ+L KAV+D+G +E   G TF  LSR + +  L++E +S DR+  +G S +   RL           ++ V  T +GV +    W
Sbjct:   79 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTRVKYTDMGVFSAVAGW 182          
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 5.170e-14
Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 0
Query:   14 RTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRL 88
            RTQLPL + +AIT+H+SQGQ+L KAV+D+G +E   G TF  LSR + +  L++E +S DR+  +G S +   RL
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARL 87          
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 7.950e-14
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   14 RTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDGQTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRLA----------TSEVWRTPLGVAAVCRRWKGRHGR 113
            RTQLPL + +AIT+H+SQGQ+L KAV+D+G +E   G TF  LSR + +  L++E +S DR+  +G S++   RL           T+ V  T +GV       K R GR
Sbjct:   10 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRIGNLGNSSTMKGRLQEEVRLGELARTTRVRYTDMGVFGAVA-GKSRRGR 118          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9850.20841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5P8_9PHAE1.170e-2053.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGT1_9PHAE4.160e-2053.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K558_9PHAE5.320e-2053.85ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE5.440e-2057.47ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KDL6_9PHAE3.080e-1952.75ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KSF1_9PHAE2.370e-1448.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6S7GL72_PARCT2.430e-1448.75ATP-dependent DNA helicase PIF1 n=3 Tax=Paramurice... [more]
A0A6H5JMH2_9PHAE4.910e-1439.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFN2_9PHAE5.170e-1448.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K214_9PHAE7.950e-1440.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 11..67
NoneNo IPR availablePANTHERPTHR23274:SF32ATP-DEPENDENT DNA HELICASE PIF1coord: 11..67
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9850contigS-firma_M_contig9850:140..487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9850.20841.1mRNA_S-firma_M_contig9850.20841.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9850 140..514 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9850.20841.1 ID=prot_S-firma_M_contig9850.20841.1|Name=mRNA_S-firma_M_contig9850.20841.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=116bp
RAGARGRAPARCTRTQLPLAVAFAITIHQSQGQSLLKAVVDIGSREETDG
QTFTALSRVRTIDGLLLEDVSLDRLLRIGQSNSFPLRLATSEVWRTPLGV
AAVCRRWKGRHGRRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase