prot_S-firma_M_contig984.20826.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig984.20826.1
Unique Nameprot_S-firma_M_contig984.20826.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length238
Homology
BLAST of mRNA_S-firma_M_contig984.20826.1 vs. uniprot
Match: A0A6H5JGV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV2_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.860e-29
Identity = 88/193 (45.60%), Postives = 108/193 (55.96%), Query Frame = 0
Query:   46 RSQHLVVLLTDWMSAVALQAVFYGKSQFSISEKAEMTAATALFMIPPTLVFPALLRTANAPPSSATSYRARTSTHNNGHWRRAFRDKKHGMSEHDLMLKAQHLDFHGTPSPARTKPTNTRRGPAEN---ITMLPERLPPI--DRRGGEPN--ITEKSVVANPRDANANKTAVYRDIVEVQRVIGCTCSFRCGW 231
            RSQHLV+LL DWMSAVALQAVFYGKSQFSI  KA+MT  TALFMIP  LVFP LLR AN PP S T  +A  S H+      + R  +HG+  H       H     TP   +    +T+R        +T +  + PP    RR  +P+  +   +VV +    +ANKTAVYRDI+  QRVI   C     W
Sbjct:  120 RSQHLVLLLADWMSAVALQAVFYGKSQFSIRNKAQMTVTTALFMIPTALVFPFLLRKANTPPISETVIKAGRSRHDAPFKENSRRHAQHGVLGH------HHPPDKNTPRDEQQPALSTKRSSVIRGTVVTNITLQDPPTLARRRERKPSAFVQSPTVVESISGVSANKTAVYRDIIMWQRVIVALCLILPVW 306          
BLAST of mRNA_S-firma_M_contig984.20826.1 vs. uniprot
Match: A0A6H5JVI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI0_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 3.790e-21
Identity = 57/94 (60.64%), Postives = 66/94 (70.21%), Query Frame = 0
Query:   58 MSAVALQAVFYGKSQFSISEKAEMTAATALFMIPPTLVFPALLRTANAPPSSATSYRARTSTHNNGHWRRAFRDKKHGMSEHDLMLKAQHLDFH 151
            MSAV LQA+FYGKSQFSI EKAEMTAATALFMIP  LVFPA++R AN PPSS T  R R   H   H ++     K  MS+ D ++KAQ  +FH
Sbjct:    1 MSAVTLQAIFYGKSQFSIREKAEMTAATALFMIPTALVFPAMMRLANTPPSSETLTRVRK--HKTAHKQQPQGGNKQLMSQRDRLVKAQREEFH 92          
BLAST of mRNA_S-firma_M_contig984.20826.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 4.200e-17
Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   46 RSQHLVVLLTDWMSAVALQAVFYGKSQFSISEKAEMTAATALFMIPPTLVFPALLRTANAPPSSAT 111
            RSQHLV+LL DWMSA+ LQA+FYGKSQF + +K EMT  +AL M+P  ++FPALLR  N PP+S T
Sbjct:  952 RSQHLVLLLADWMSAILLQAIFYGKSQFGVRQKVEMTVVSALLMLPTGVIFPALLRAGNTPPASQT 1017          
BLAST of mRNA_S-firma_M_contig984.20826.1 vs. uniprot
Match: D7FJB7_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB7_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 7.710e-17
Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   46 RSQHLVVLLTDWMSAVALQAVFYGKSQFSISEKAEMTAATALFMIPPTLVFPALLRTANAPPSSAT 111
            RSQHLV+LL DWMSA+ LQA+FYGKSQF + +K EMT  +AL M+P  ++FPALLR  N PP+S T
Sbjct:  890 RSQHLVLLLADWMSAILLQAIFYGKSQFGVRKKVEMTVISALLMLPTGVIFPALLRAGNTPPASQT 955          
BLAST of mRNA_S-firma_M_contig984.20826.1 vs. uniprot
Match: D7FJB6_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB6_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.970e-15
Identity = 44/69 (63.77%), Postives = 52/69 (75.36%), Query Frame = 0
Query:   46 RSQHLVVLLTDWMSAVALQAVFYGKSQFSISEKAEMTAATALFMIPPTLVFPALLRTANAPPSSATSYR 114
            R QHLV+LLTDWMSA+ LQA+FYGKSQF +    EM   +ALFM+P  +VFPALLR AN PP+S T  R
Sbjct: 1103 RPQHLVLLLTDWMSAIVLQALFYGKSQFGV----EMAVVSALFMLPAGVVFPALLRVANTPPASQTLQR 1167          
BLAST of mRNA_S-firma_M_contig984.20826.1 vs. uniprot
Match: D7G0E1_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E1_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.280e-6
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   46 RSQHLVVLLTDWMSAVALQAVFYGKSQFSISEK 78
            RSQHLV+LL DWMSAVALQAVFYGKSQ SI +K
Sbjct:  413 RSQHLVILLADWMSAVALQAVFYGKSQVSIRQK 445          
BLAST of mRNA_S-firma_M_contig984.20826.1 vs. uniprot
Match: D7G0E0_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E0_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 2.600e-6
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0
Query:   46 RSQHLVVLLTDWMSAVALQAVFYGKSQFSISEK 78
            RSQHLV+LL DWMS + LQA+FYGKSQFSI EK
Sbjct:  379 RSQHLVILLADWMSVLTLQAIFYGKSQFSIREK 411          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig984.20826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JGV2_9PHAE2.860e-2945.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVI0_9PHAE3.790e-2160.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCS7_9PHAE4.200e-1763.64REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJB7_ECTSI7.710e-1763.64GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJB6_ECTSI2.970e-1563.77GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0E1_ECTSI1.280e-684.85GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0E0_ECTSI2.600e-678.79GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig984contigS-firma_M_contig984:19062..22260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig984.20826.1mRNA_S-firma_M_contig984.20826.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig984 17752..23249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig984.20826.1 ID=prot_S-firma_M_contig984.20826.1|Name=mRNA_S-firma_M_contig984.20826.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=238bp
MRTPERPASTLGRILCRVLQVQGSTDLCYTRSSTLSGATTRRSNCRSQHL
VVLLTDWMSAVALQAVFYGKSQFSISEKAEMTAATALFMIPPTLVFPALL
RTANAPPSSATSYRARTSTHNNGHWRRAFRDKKHGMSEHDLMLKAQHLDF
HGTPSPARTKPTNTRRGPAENITMLPERLPPIDRRGGEPNITEKSVVANP
RDANANKTAVYRDIVEVQRVIGCTCSFRCGWRLLCSW*
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