prot_S-firma_M_contig982.20807.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig982.20807.1
Unique Nameprot_S-firma_M_contig982.20807.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length892
Homology
BLAST of mRNA_S-firma_M_contig982.20807.1 vs. uniprot
Match: D8LRB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRB1_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 3.250e-100
Identity = 299/856 (34.93%), Postives = 408/856 (47.66%), Query Frame = 0
Query:   13 ALVPLMVNAQSSFKVADCDDLFDIPYPLSSATEIEFTASPVTCQANYHMIVDNDADVTLTTSLAAMELVNIRFEINAGSTLTVQLPNLQWQSIDDEEDTSGAALYVAGGAA-------EAYFEEDVTFTGCSVP--RYSWGGVGGAIANMGGKLVFEKSASIIGTTEGGGLYSEGTVEFHGEALFQDNENYN--DYNNGGGGIQM-MGGKITFKAAASFIGNLCEEQAEIGDWEGNNYYGGEGGAIHVSPENGRDEMELVFEGPVLFRGNKAYEGAALYLDSRSSGIAVVFEDLVTFEDN-EAPRSCG----GAIRITG-GLADFQAGVSATGNIAKDGGVFCVRDDDSTLNLAGPVSMTGNTALYQGGAIFNQGNVTMPEDADLSGNTAATCPSIKNWEEWENRYILESNRAQPEGTVEFTDGSSHTGSSREMCYFGQPAGNPGSPLVLTPETANCDTLFETGTNLGGHAYILSAGTDLAEYSYLVLDSRVVSGMQVEVGAGDFDISCATQSVIIVTGGGEFTISSSASELTLSNIRVEVTGHTTLYMDIPELIMTGIDKSPIGGATHVDRDSSLEFLWDVKFLSNTLYYQTDF-FWLEYGGAALFNAGMVKFHQQAYFRENGQFEIE--GAYSTNSDGGAVLNLGDIQFMRKTKFWYNFNSRGGGXXXXXXXXXXXXXXXXVWRNNYVDYANAEEGSWVSGGHGAGLYNVGPSATALFHSKAFFKDNLGGFRGGAVAADGRSFRADYFPDGTNTITFEHEVKFKDNGFLP------KNENGRGPDGGGAGLWIYEDAMVDFQARVVFRRNTAANGGAIMNGGGRVQFASADLVDMVDNVSEQSCPDIMNYDTEI 841
            AL+ L  +A  +  V  C D    P  +++ T +E TA+ +TC  N H+ V + A V +T++LAA +L N++F +  G+ L   +P L W S++   +     + VAGGAA        A F EDVTF+ C +P   +S G  G AIAN+ G L+F+ +A+   T +GG LY+ G + F  +A+F++N++ N  D N  G G+   + G++ F  AA FI                                    +  VF+GPV+ RGN    GA LYL+       V FEDLVT EDN   P+  G    GAIR+      DFQAG++ATGNIAKDGG   V                                               +CP I+                  +G + F  G ++T +S E+CY G      GS      E  +C+            AY  +A T   +   LV+D++ +       G G    SC TQ ++ VTGGGE T++SSA+  T+ N R EV+G + L +D+P L MTGI +S  GGA  VD  SS+E + D+ FL NTL  Q D   W   GGAA+++AG   F+  A F  NGQ++ +  G   +N DGGAV N G + F RK  F  NFN     XXXXXXXXXXXXXXXX  +NN V  A                     S T LF   A F DN+GG  G A+A+ G     D   D  + +TFE + KFKDN  +P       +E     D GG  L       VDFQ   VF+RN A  GGAI+N G     + A LV   DNV+  +C DI+N D+ +
Sbjct:   27 ALLFLGGSAAQTTTVGSCSDW---PSTITTDTVLELTAAEITCDTNTHVEVLDGATVEITSALAATKLNNVKFWVREGNFLC-SVPVLDWTSVETVANIHN--VQVAGGAAMRIEPGSTATFAEDVTFSACELPVEDFSGGSEGAAIANL-GTLLFQGTATFKDTPDGGALYTWGDLTFEKDAIFENNKSINGGDGNGSGAGLYSELDGEVLFMGAAYFIXXXXXXXXXX----------------XXXXXXXXCNLPTVFKGPVVVRGNSGMLGA-LYLNGD-----VTFEDLVTVEDNIMEPKLYGDRSEGAIRLGSYSNVDFQAGITATGNIAKDGGALYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCPGIEF----------------TDGEIVFDGGETYTSASTELCYLG--TSTDGSTPTDLVEEFDCE------------AYSATAPTS-NDLPILVIDTQEIKSWDFGSGGG---FSCPTQMIVYVTGGGELTVTSSAASTTIDNARFEVSGFSKLILDVPGLTMTGIYQSQAGGALFVDVGSSMEVMHDITFLGNTLAIQYDLGLWEARGGAAVYSAGTTTFYGTADFLGNGQYDADADGYEPSNEDGGAVYNSGSMTFARKGTFLDNFNXXXXXXXXXXXXXXXXXXXXXXXKNNSVGVAYTXXXXXXXXXXXXXXXXXDDS-TVLFSGLAIFSDNVGGTAGAALASKGSDPDDDDASDVDSKVTFEDKAKFKDNYIIPPRRPTSSSEYVVDEDKGGGALAALGVTSVDFQNTAVFKRNEAVKGGAILNSGSISFLSEAKLV-TADNVASSACADILNDDSGV 817          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig982.20807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRB1_ECTSI3.250e-10034.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..891
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.579
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 116..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig982contigS-firma_M_contig982:1393..11134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig982.20807.1mRNA_S-firma_M_contig982.20807.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig982 301..11950 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig982.20807.1 ID=prot_S-firma_M_contig982.20807.1|Name=mRNA_S-firma_M_contig982.20807.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=892bp
MKLSATTAWKTLALVPLMVNAQSSFKVADCDDLFDIPYPLSSATEIEFTA
SPVTCQANYHMIVDNDADVTLTTSLAAMELVNIRFEINAGSTLTVQLPNL
QWQSIDDEEDTSGAALYVAGGAAEAYFEEDVTFTGCSVPRYSWGGVGGAI
ANMGGKLVFEKSASIIGTTEGGGLYSEGTVEFHGEALFQDNENYNDYNNG
GGGIQMMGGKITFKAAASFIGNLCEEQAEIGDWEGNNYYGGEGGAIHVSP
ENGRDEMELVFEGPVLFRGNKAYEGAALYLDSRSSGIAVVFEDLVTFEDN
EAPRSCGGAIRITGGLADFQAGVSATGNIAKDGGVFCVRDDDSTLNLAGP
VSMTGNTALYQGGAIFNQGNVTMPEDADLSGNTAATCPSIKNWEEWENRY
ILESNRAQPEGTVEFTDGSSHTGSSREMCYFGQPAGNPGSPLVLTPETAN
CDTLFETGTNLGGHAYILSAGTDLAEYSYLVLDSRVVSGMQVEVGAGDFD
ISCATQSVIIVTGGGEFTISSSASELTLSNIRVEVTGHTTLYMDIPELIM
TGIDKSPIGGATHVDRDSSLEFLWDVKFLSNTLYYQTDFFWLEYGGAALF
NAGMVKFHQQAYFRENGQFEIEGAYSTNSDGGAVLNLGDIQFMRKTKFWY
NFNSRGGGGGGIANAGSIEFHRRTVWRNNYVDYANAEEGSWVSGGHGAGL
YNVGPSATALFHSKAFFKDNLGGFRGGAVAADGRSFRADYFPDGTNTITF
EHEVKFKDNGFLPKNENGRGPDGGGAGLWIYEDAMVDFQARVVFRRNTAA
NGGAIMNGGGRVQFASADLVDMVDNVSEQSCPDIMNYDTEINRQENDSVF
GDIDDPDNAECGYDECTFYLGEIAMGAVETIVGPAPEICEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence