prot_S-firma_M_contig9807.20796.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9807.20796.1
Unique Nameprot_S-firma_M_contig9807.20796.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length117
Homology
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BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.830e-8
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGLMRDQ 43
            QGKF EA+ LYKR+L+I+EKVYGPDH EVAA L   A LM  Q
Sbjct:    6 QGKFHEAESLYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQ 48
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BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.430e-7
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGLMRDQ 43
            QGK EEA+ LY+R+LAI+E+VYGPDH EVA  L   AGL+  Q
Sbjct:   81 QGKHEEAEPLYRRSLAIDEEVYGPDHPEVATDLNNLAGLLETQ 123
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BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 9.080e-7
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGLMRDQ 43
            QGK++ A+ LY R+LAI EKVYGPDH EVA +L  RA  +R Q
Sbjct:  395 QGKYDAAEPLYVRSLAIREKVYGPDHPEVATSLNNRAEFLRHQ 437
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BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.230e-6
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGLMR 41
            QGK+EEA+ L  R+LAI+EKVYGPDH +VA  L  RAG +R
Sbjct:  340 QGKYEEAETLCVRSLAIDEKVYGPDHPKVAIGLNNRAGFLR 380
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BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 52.0 bits (123), Expect = 1.560e-6
Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGL 39
            QGK+EEA+ LY+RAL I E V GPDH  VA TL   AGL
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
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BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 2.240e-6
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGLM 40
            QGK+EEA+ LY  +LAI+EKVYGPDH EVA  L   AGL+
Sbjct:   87 QGKYEEAEPLYMLSLAIDEKVYGPDHLEVAEDLNNCAGLL 126
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BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 5.630e-6
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGLM 40
            QGK++EA+ LYKR+LAI+EKVYGPDH +VA  L     L+
Sbjct:  351 QGKYDEAEPLYKRSLAIDEKVYGPDHPDVATALNNWVRLL 390
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BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: A0A6H5KWM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM2_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 9.440e-6
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGLM 40
            QG +++A  LYKR+LAI EKV GPDH  VA +L  RAGL+
Sbjct:  129 QGNYDQAGMLYKRSLAIREKVLGPDHPNVAQSLNNRAGLL 168
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BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: UPI0013D05A06 (tetratricopeptide repeat-containing protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D05A06)

HSP 1 Score: 52.0 bits (123), Expect = 1.870e-5
Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGL 39
            QGK+EEA+ LY+RAL I E V GPDH  VA TL   AGL
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
[Close]
BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Match: A0A6H5KU99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU99_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 2.710e-5
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    1 QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGLMRDQ 43
            QGK+ EA   Y+R+LAI+++VYG DH +VA TL   AGL+  Q
Sbjct:  469 QGKYSEAKTFYERSLAIDKRVYGADHPQVATTLNNLAGLLETQ 511
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9807.20796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5LI51_9PHAE1.830e-867.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G180_ECTSI1.430e-762.79TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5J9V8_9PHAE9.080e-760.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L3_ECTSI1.230e-663.41Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
UPI0013D295281.560e-664.10tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5K5H9_9PHAE2.240e-665.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIY6_9PHAE5.630e-660.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWM2_9PHAE9.440e-660.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0013D05A061.870e-564.10tetratricopeptide repeat-containing protein n=1 Ta... [more]
A0A6H5KU99_9PHAE2.710e-553.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 72..105
e-value: 0.0028
score: 26.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1..21
score: 5.517
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 72..105
score: 8.496
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 30..63
score: 5.605
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..117
e-value: 1.3E-43
score: 151.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..104
NoneNo IPR availablePFAMPF13374TPR_10coord: 1..27
e-value: 3.5E-6
score: 26.7
NoneNo IPR availablePFAMPF13424TPR_12coord: 29..104
e-value: 6.8E-19
score: 67.9
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..116
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..116
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..105
score: 14.044

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9807contigS-firma_M_contig9807:990..3682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9807.20796.1mRNA_S-firma_M_contig9807.20796.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9807 990..3683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9807.20796.1 ID=prot_S-firma_M_contig9807.20796.1|Name=mRNA_S-firma_M_contig9807.20796.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=117bp
QGKFEEADRLYKRALAIEEKVYGPDHQEVAATLRQRAGLMRDQGKFEEAG
VMYEGVLAIEEKVYGPDHQEVATTLSNRAQLLQDQGKFEEADRLYKRALA
IQEKVYGPDHQEVAVTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat