prot_S-firma_M_contig9800.20793.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9800.20793.1
Unique Nameprot_S-firma_M_contig9800.20793.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length108
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9800.20793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9800contigS-firma_M_contig9800:3513..3836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9800.20793.1mRNA_S-firma_M_contig9800.20793.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9800 3513..3836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9800.20793.1 ID=prot_S-firma_M_contig9800.20793.1|Name=mRNA_S-firma_M_contig9800.20793.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=108bp
SSSTLSVLLSPPSCAVNATVCSSLQIIVVPLFAAVGNAELFLIKSAEIAL
SKTRRKAPPTDSLGLTTSDSSPLTSTNSASRLQSLPIWCVGAVACPRQQQ
QVTRSHAS
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