prot_S-firma_M_contig9773.20761.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9773.20761.1
Unique Nameprot_S-firma_M_contig9773.20761.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length233
Homology
BLAST of mRNA_S-firma_M_contig9773.20761.1 vs. uniprot
Match: D7FMD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD2_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 8.890e-90
Identity = 173/232 (74.57%), Postives = 198/232 (85.34%), Query Frame = 0
Query:    2 AARDNVEAVSKAEHRKLLSEVAQVSTLRESNEMLRSKLGDAERRSRTAEDSLNRLRIQVAPLQHEKRQQSASTAALASEKESLRKEVENWKKRVTSLTASFNAVDPKEHAEVIADKERLEKLLSDARQARAGLEASKADLSRGKAQAEKERDDANTTKTKLIPQVLELRKSLYAVNAQKAAALRDLEAKLSAEKEKATKAAADAASLRQEVVRTRAHANATAASAAKQLNEQ 233
            AA ++VEAVSKAEHRKLL EVAQ+STLRESN+MLRSKLGDAERRSRTAE SL++LR Q+APLQ  +RQQSAS+A+LASEKESLRKEVENWKKRVTSLTASFNAVDPK+H +VIA+KERL K L++A Q +A LE +KADL+RGKA AEKERDDAN  K K++PQV ELRKSL A  AQKAAA RDLEAKL+AE+EK      +AASLRQE  RTRA AN+T A+  KQLNEQ
Sbjct:  103 AATESVEAVSKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQMAPLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAKALAEADQTKAALENAKADLTRGKAAAEKERDDANAIKAKVLPQVHELRKSLSASAAQKAAASRDLEAKLAAEREKXXXXXXEAASLRQENARTRASANSTTANVTKQLNEQ 334          
BLAST of mRNA_S-firma_M_contig9773.20761.1 vs. uniprot
Match: A0A6H5KRL3_9PHAE (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRL3_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.230e-84
Identity = 173/233 (74.25%), Postives = 201/233 (86.27%), Query Frame = 0
Query:    1 RAARDNVEAVSKAEHRKLLSEVAQVSTLRESNEMLRSKLGDAERRSRTAEDSLNRLRIQVAPLQHEKRQQSASTAALASEKESLRKEVENWKKRVTSLTASFNAVDPKEHAEVIADKERLEKLLSDARQARAGLEASKADLSRGKAQAEKERDDANTTKTKLIPQVLELRKSLYAVNAQKAAALRDLEAKLSAEKEKATKAAADAASLRQEVVRTRAHANATAASAAKQLNEQ 233
            RAA ++VEAV+KAEHRKLL EVAQ+STLRESN+MLRSKLGDAERRSRTAE SL++LR Q+APLQ  +RQQSAS+A+LASEKESLRKEVE+WKKRVT+LTASFNAVDPK+H +VIA+KERL K L++A QA+A LE +   L+RGKA AEKERDDAN  K KL+PQV ELRKSL A  AQKAA  RDLEAKL+AE+EKA+KAAA+AASLRQE  RTRA AN+  A+  KQLNEQ
Sbjct:  804 RAATESVEAVTKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQMAPLQRAQRQQSASSASLASEKESLRKEVESWKKRVTNLTASFNAVDPKDHEDVIAEKERLAKALAEAEQAKAALENAXXXLTRGKAAAEKERDDANAIKAKLLPQVHELRKSLSASAAQKAATSRDLEAKLAAEREKASKAAAEAASLRQENARTRASANSNTANVTKQLNEQ 1036          
BLAST of mRNA_S-firma_M_contig9773.20761.1 vs. uniprot
Match: A0A6H5JK01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK01_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 3.010e-8
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 0
Query:  177 NAQKAAALRDLEAKLSAEKEKATKAAADAASLRQEVVRTRAHANATAASAAKQLNEQ 233
            +AQKAA  RDLEAKL+AE+EKA+KAAA+AASLRQE  RTRA AN+  A+  KQLNEQ
Sbjct:    3 SAQKAATSRDLEAKLAAEREKASKAAAEAASLRQENARTRASANSNTANVTKQLNEQ 59          
BLAST of mRNA_S-firma_M_contig9773.20761.1 vs. uniprot
Match: A0A7S1YNQ1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YNQ1_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.980e-8
Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 0
Query:   17 KLLSEVAQVSTLRESNEMLRSKLGDAERRSRTAEDSLNRLRIQVAPLQHEKRQQSASTAALASEKESLRKEVENWKKRVTSLTASFNAVDPKEHAEVIADKERLEK 122
            KL    AQ++ + ESN++LR + G  ++     E  L   +  +AP            A++ +EK+SL +E+E+WK+RV SL A FN VDP++H + +AD + ++K
Sbjct: 1185 KLKEAEAQLNVVSESNQLLRVEAGQLKKTVSQLETKLAEAKGAIAPKDKLALHLEGKVASMQAEKDSLSRELESWKRRVESLVAKFNHVDPEDHKKALADAQSMKK 1290          
BLAST of mRNA_S-firma_M_contig9773.20761.1 vs. uniprot
Match: A0A448ZKX7_9STRA (TPR_MLP1_2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKX7_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.590e-6
Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = 0
Query:   17 KLLSEVAQVSTLRESNEMLRSKLGDAERRSRTAEDSLNRLRIQVAPLQHEKRQQSASTAALASEKESLRKEVENWKKRVTSLTASFNAVDPKEHAEVIADKERLEK 122
            KL +   Q   L +SN  L+ ++ D E     A+  +   +  + P   +++Q  +  A L +EK+SL +E+++WK RV SL + FN VDP+EH +V+   E LEK
Sbjct: 1273 KLKTAEEQSRLLSDSNAHLQRQVQDLEANLAXAKQEVEESKKALQPSADKQKQLESDKAVLLAEKDSLLREIDDWKGRVQSLVSKFNQVDPEEHLKVVKKSEELEK 1378          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9773.20761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FMD2_ECTSI8.890e-9074.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRL3_9PHAE1.230e-8474.25TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JK01_9PHAE3.010e-871.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1YNQ1_9STRA7.980e-834.91Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A448ZKX7_9STRA1.590e-634.91TPR_MLP1_2 domain-containing protein n=1 Tax=Pseud... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..59
NoneNo IPR availableCOILSCoilCoilcoord: 74..101
NoneNo IPR availableCOILSCoilCoilcoord: 110..158
NoneNo IPR availableCOILSCoilCoilcoord: 177..211
NoneNo IPR availablePANTHERPTHR18898:SF2NUCLEOPROTEIN TPRcoord: 3..227
NoneNo IPR availablePANTHERPTHR18898NUCLEOPROTEIN TPR-RELATEDcoord: 3..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9773contigS-firma_M_contig9773:172..3732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9773.20761.1mRNA_S-firma_M_contig9773.20761.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9773 172..3732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9773.20761.1 ID=prot_S-firma_M_contig9773.20761.1|Name=mRNA_S-firma_M_contig9773.20761.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=233bp
RAARDNVEAVSKAEHRKLLSEVAQVSTLRESNEMLRSKLGDAERRSRTAE
DSLNRLRIQVAPLQHEKRQQSASTAALASEKESLRKEVENWKKRVTSLTA
SFNAVDPKEHAEVIADKERLEKLLSDARQARAGLEASKADLSRGKAQAEK
ERDDANTTKTKLIPQVLELRKSLYAVNAQKAAALRDLEAKLSAEKEKATK
AAADAASLRQEVVRTRAHANATAASAAKQLNEQ
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