prot_S-firma_M_contig9770.20759.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9770.20759.1
Unique Nameprot_S-firma_M_contig9770.20759.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length71
Homology
BLAST of mRNA_S-firma_M_contig9770.20759.1 vs. uniprot
Match: D8LQ15_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ15_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 2.560e-8
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    6 KVYGLDHQHVAETIGRRASMLNDQGKHDEAGSLHDRASAILEKAVGGDHPDVAVALN 62
            KVY LD   VA+ +  +A  L+ QGK++EA  L +R+ AI EK++G DHPDVA ALN
Sbjct:  592 KVYDLDDLAVAKDLCNQAVGLSQQGKYEEAEPLSERSLAICEKSLGPDHPDVATALN 648          
BLAST of mRNA_S-firma_M_contig9770.20759.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 7.130e-6
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    4 REKVYGLDHQHVAETIGRRASMLNDQGKHDEAGSLHDRASAILEKAVGGDHPDVAVALNDRALSFMR 70
            +E  + LD ++ A +  R A++L+ QGK++EA +L  R+ AI EK  G DHP VA+ LN+RA  F+R
Sbjct:  317 KESRWALDRENEARS--RLATVLDKQGKYEEAETLCVRSLAIDEKVYGPDHPKVAIGLNNRA-GFLR 380          
BLAST of mRNA_S-firma_M_contig9770.20759.1 vs. uniprot
Match: A0A2W4QJT5_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Methylumidiphilus alinenensis TaxID=2202197 RepID=A0A2W4QJT5_9GAMM)

HSP 1 Score: 47.8 bits (112), Expect = 2.260e-5
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0
Query:   23 ASMLNDQGKHDEAGSLHDRASAILEKAVGGDHPDVAVALNDRA 65
            A +   QGK+ EA  L+  + AI EKA+G DHPDVAV+LN+ A
Sbjct:    2 AELYRSQGKYAEAEPLYQSSLAIAEKALGKDHPDVAVSLNNLA 44          
BLAST of mRNA_S-firma_M_contig9770.20759.1 vs. uniprot
Match: A0A1Z4JR51_LEPBY (Peptidase-like protein n=3 Tax=Leptolyngbyaceae TaxID=1890438 RepID=A0A1Z4JR51_LEPBY)

HSP 1 Score: 50.1 bits (118), Expect = 2.460e-5
Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   17 ETIGRRASMLNDQGKHDEAGSLHDRASAILEKAVGGDHPDVAVALNDRALSFMR 70
            + +  +AS L DQG++ EA  L ++A  + E A+G +HP++AV LND  LS++R
Sbjct:   31 QQLQAQASQLTDQGRYREAIPLLEKALQLQETALGKNHPEIAVLLNDLGLSYVR 84          
BLAST of mRNA_S-firma_M_contig9770.20759.1 vs. uniprot
Match: A0A3D2WGF6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A3D2WGF6_9BACT)

HSP 1 Score: 46.6 bits (109), Expect = 6.810e-5
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   15 VAETIGRRASMLNDQGKHDEAGSLHDRASAILEKAVGGDHPDVAVALND 63
            +A T+   AS+L +QG  DEA S   R   I EKA+G DHPDVA+ L++
Sbjct:   40 IAHTLFTEASILANQGHQDEAESKLQRVLDIREKALGLDHPDVALTLHN 88          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9770.20759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LQ15_ECTSI2.560e-852.63Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
D7G1L3_ECTSI7.130e-644.78Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A2W4QJT5_9GAMM2.260e-553.49Uncharacterized protein n=1 Tax=Candidatus Methylu... [more]
A0A1Z4JR51_LEPBY2.460e-542.59Peptidase-like protein n=3 Tax=Leptolyngbyaceae Ta... [more]
A0A3D2WGF6_9BACT6.810e-548.98Uncharacterized protein (Fragment) n=1 Tax=Gemmati... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 15..66
e-value: 1.3E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..66
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..71
e-value: 3.5E-17
score: 64.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 11..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9770contigS-firma_M_contig9770:3224..3830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9770.20759.1mRNA_S-firma_M_contig9770.20759.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9770 3224..3831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9770.20759.1 ID=prot_S-firma_M_contig9770.20759.1|Name=mRNA_S-firma_M_contig9770.20759.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=71bp
LAIREKVYGLDHQHVAETIGRRASMLNDQGKHDEAGSLHDRASAILEKAV
GGDHPDVAVALNDRALSFMRQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf