prot_S-firma_M_contig9748.20740.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9748.20740.1
Unique Nameprot_S-firma_M_contig9748.20740.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length102
Homology
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BLAST of mRNA_S-firma_M_contig9748.20740.1 vs. uniprot
Match: D8LT03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT03_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 1.010e-43
Identity = 72/101 (71.29%), Postives = 85/101 (84.16%), Query Frame = 0 
Query:    1 MDEAFQNRFVPFWHKAFFLSELGLEVPAAAMKFLFGGLEVLCAVLLLTKYKFSAAILLFGLMSLVLMTHLFLGEFAELPTPLVLCLASLGVGFVGFKPLRQ 101
            MDEAF+NRF PFW + FF SE+G+E+ AAA+K +FG  EVLCA LL T +KFSAAI+LFGLMS V++THLFLGEFAELP PLVLCL+SL VGFVG+ PL Q
Sbjct:    1 MDEAFENRFTPFWQEMFFFSEIGVELNAAAVKLIFGSTEVLCAALLFTSHKFSAAIMLFGLMSAVVLTHLFLGEFAELPMPLVLCLSSLAVGFVGYSPLDQ 101
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9748.20740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT03_ECTSI1.010e-4371.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032808DoxX familyPFAMPF13564DoxX_2coord: 24..90
e-value: 1.3E-6
score: 28.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..77
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
NoneNo IPR availableTMHMMTMhelixcoord: 54..73
NoneNo IPR availableTMHMMTMhelixcoord: 78..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9748contigS-firma_M_contig9748:2747..3733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9748.20740.1mRNA_S-firma_M_contig9748.20740.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9748 2747..3733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9748.20740.1 ID=prot_S-firma_M_contig9748.20740.1|Name=mRNA_S-firma_M_contig9748.20740.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=102bp
MDEAFQNRFVPFWHKAFFLSELGLEVPAAAMKFLFGGLEVLCAVLLLTKY
KFSAAILLFGLMSLVLMTHLFLGEFAELPTPLVLCLASLGVGFVGFKPLR
Q*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032808DoxX