prot_S-firma_M_contig9730.20730.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9730.20730.1
Unique Nameprot_S-firma_M_contig9730.20730.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length59
Homology
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BLAST of mRNA_S-firma_M_contig9730.20730.1 vs. uniprot
Match: A0A6H5KI71_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI71_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.380e-9
Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 0 
Query:    1 MSTPFELPQGSKEEAVAAFDEAVLKQEVPTLVYFHAK 37
            MS PFELP+  +EEAV AFD+AV+ QE+PTLVYFHAK
Sbjct:   43 MSVPFELPKVPQEEAVVAFDDAVVNQELPTLVYFHAK 79
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9730.20730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KI71_9PHAE2.380e-972.97Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9730contigS-firma_M_contig9730:641..3499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9730.20730.1mRNA_S-firma_M_contig9730.20730.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9730 641..3622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9730.20730.1 ID=prot_S-firma_M_contig9730.20730.1|Name=mRNA_S-firma_M_contig9730.20730.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=59bp
MSTPFELPQGSKEEAVAAFDEAVLKQEVPTLVYFHAKHTSGEHIAIGRTV
RGCLGGER*
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