prot_S-firma_M_contig9729.20722.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig9729.20722.1
Unique Name	prot_S-firma_M_contig9729.20722.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	250

Homology

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BLAST of mRNA_S-firma_M_contig9729.20722.1 vs. uniprot
Match: D7FRR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR3_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 2.710e-53
Identity = 140/264 (53.03%), Postives = 169/264 (64.02%), Query Frame = 0

Query:   19 RGAPVAAAICIASEMAFPEATTLVRWFCSKYVASLCEVARVAEGEARKLEKEGKDRRKARTSSXXXXXXXXXXXXXXXXXXTG-------KAARLLRVLITAFNAFLRHCSRGR-MYSKTSHVHVLDITVSLTRKVIEKLAAECSVDPAAGTAAARLRGLTAKACFAPLAVPDGAAAGDGATAVGGGEEGP-------------------------PSFDNLKRIGNRDVEKLLVSISGGKAKKDVQYLRHPGSCVEAIGSLRR 249
            +GAP AA IC+ASE  FPEA  LVRWFCSK+VASLCEVA+  E EA++LEK+GK         XXXXXXXXXXXXXXXXXX         +A RLLRVL+ +FNAFL+  S G  M+S ++HV VLDI VSL RK IE+L+ ECS DP+ G AAARLRGLTA ACFAP++            A+ GG E                           P+ DNL R+G +DV+KLL+ +SGG+AKKD  YL  P  C+EAIG+LRR
Sbjct:  103 QGAPQAALICVASEAVFPEAIALVRWFCSKHVASLCEVAQAMEIEAKRLEKQGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAERAIRLLRVLLGSFNAFLQQSSLGSGMFSTSAHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFAPVS-----------PALDGGGEADXXXXXXXXXXXXXXXXXXXXXXXXAPNSDNLDRMGKKDVDKLLMCVSGGEAKKDEVYLSLPCICIEAIGALRR 355

[Close]

BLAST of mRNA_S-firma_M_contig9729.20722.1 vs. uniprot
Match: A0A6H5JP83_9PHAE (EAF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP83_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 5.340e-53
Identity = 137/240 (57.08%), Postives = 163/240 (67.92%), Query Frame = 0

Query:   19 RGAPVAAAICIASEMAFPEATTLVRWFCSKYVASLCEVARVAEGEARKLEKEGKDRRKARTSSXXXXXXXXXXXXXXXXXX-------TGKAARLLRVLITAFNAFLRHCSRGR-MYSKTSHVHVLDITVSLTRKVIEKLAAECSVDPAAGTAAARLRGLTAKACFAPLAVP-DGAAAGDGATAVGGGEEGPPSFDNLKRIGNRDVEKLLVSISGGKAKKDVQYLRHPGSCVEAIGSLRR 249
            +GAP AA IC+ASE  FP+A  LVRWFCSK+VASLCEV++  E EA++LEK+           XXXXXXXXXXXXXXXXXX         +A RLLRVLI++FNAFL   S G  M+S  +HV VLDI VSL RK IE+L+ ECS DP+ G AAARLRGLTA ACFA ++   DG    D  +         P+ DNL R+G +DV+KLLV ISGG+ KKD  YL  P  CVEAIG+LRR
Sbjct:  105 QGAPQAALICVASEAVFPKAIALVRWFCSKHVASLCEVSQAMEIEAKRLEKQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGSGTRAERATRLLRVLISSFNAFLEQSSPGSGMFSTAAHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFASVSPALDGGGEADEKSQTKEQVPAAPNSDNLDRMGKKDVDKLLVCISGGEGKKDEAYLSPPCICVEAIGALRR 344

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig9729.20722.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig9729.20722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FRR3_ECTSI	2.710e-53	53.03	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JP83_9PHAE	5.340e-53	57.08	EAF domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig9729	contig	S-firma_M_contig9729:473..2362 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig9729.20722.1	mRNA_S-firma_M_contig9729.20722.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig9729 473..2362 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig9729.20722.1 ID=prot_S-firma_M_contig9729.20722.1|Name=mRNA_S-firma_M_contig9729.20722.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=250bp
AAAAGGGGGGEVVVVEPWRGAPVAAAICIASEMAFPEATTLVRWFCSKYV
ASLCEVARVAEGEARKLEKEGKDRRKARTSSVSGSSNSNDTDSTDAGAGT
GKAARLLRVLITAFNAFLRHCSRGRMYSKTSHVHVLDITVSLTRKVIEKL
AAECSVDPAAGTAAARLRGLTAKACFAPLAVPDGAAAGDGATAVGGGEEG
PPSFDNLKRIGNRDVEKLLVSISGGKAKKDVQYLRHPGSCVEAIGSLRR*