prot_S-firma_M_contig9697.20683.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9697.20683.1
Unique Nameprot_S-firma_M_contig9697.20683.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length168
Homology
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BLAST of mRNA_S-firma_M_contig9697.20683.1 vs. uniprot
Match: A0A6H5JGT0_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT0_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.230e-6
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:    1 GTLFADAERSVGPRRAPTPGSVSPALFHGESVWL 34
            GT FAD  RSVGPR APTPGSVSPALFHGE + L
Sbjct:  547 GTWFADVARSVGPRDAPTPGSVSPALFHGEQLKL 580
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9697.20683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGT0_9PHAE4.230e-679.41Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9697contigS-firma_M_contig9697:2159..2662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9697.20683.1mRNA_S-firma_M_contig9697.20683.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9697 2159..2662 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9697.20683.1 ID=prot_S-firma_M_contig9697.20683.1|Name=mRNA_S-firma_M_contig9697.20683.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=168bp
GTLFADAERSVGPRRAPTPGSVSPALFHGESVWLPEFSLTYRTCPLLAEG
ADPRSDALSHPSRTLPRWDDRTHTTEHGQYGTSVNSHAQNHSRAAPRLDA
HSDTYRAVPRLDAPSHTVRAVPRSDARSDTNRAGPRLDAPSHAVRAVPRS
DARSDTNRAGPRLDALSH
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