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Homology
BLAST of mRNA_S-firma_M_contig9695.20680.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 1.220e-5 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
Query: 232 LFRRALEIEEAKLGPDDVQVAVTLQELARCVRKAGK 267
LFRRALEIEEA LGPDD+QVAVTLQEL C+R+ G+
Sbjct: 618 LFRRALEIEEATLGPDDIQVAVTLQELGLCMRETGR 653
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002151 | Kinesin light chain | PRINTS | PR00381 | KINESINLIGHT | coord: 292..312
score: 45.71
coord: 327..348
score: 50.0
coord: 248..265
score: 38.89 |
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 420..453
e-value: 11.0
score: 14.8
coord: 378..411
e-value: 0.15
score: 21.1
coord: 294..327
e-value: 80.0
score: 7.0
coord: 462..495
e-value: 11.0
score: 14.7
coord: 252..285
e-value: 1.8
score: 17.6
coord: 336..369
e-value: 0.0077
score: 25.4 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 336..369
score: 8.85 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 294..327
score: 6.549 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 420..453
score: 7.847 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 378..411
score: 8.054 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 252..285
score: 6.697 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 462..495
score: 6.844 |
| None | No IPR available | PFAM | PF13374 | TPR_10 | coord: 378..415
e-value: 1.5E-4
score: 21.5 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 222..283
e-value: 3.0E-13
score: 49.9
coord: 418..493
e-value: 2.3E-17
score: 63.0
coord: 293..367
e-value: 3.0E-16
score: 59.5 |
| None | No IPR available | PANTHER | PTHR45783 | FAMILY NOT NAMED | coord: 305..436
coord: 400..500
coord: 225..360 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 364..500
e-value: 4.1E-41
score: 142.9
coord: 213..363
e-value: 1.4E-42
score: 147.7 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 221..324 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 294..492 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 252..495
score: 21.522 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-firma_M_contig9695.20680.1 ID=prot_S-firma_M_contig9695.20680.1|Name=mRNA_S-firma_M_contig9695.20680.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=500bp
TRLRGLIYGCKKGDEDDKLLDIVFGMWRRGKSTAMNGTDIDHSGLIKRIK
SLCLKPLDEGGSRNPVNVDQPDEDGSPGATGAVSAEGGAVGGEGGGVDLA
VTAPAAASQQGVGGGAGATGGGAGQDGGSVGPAVPASASGSQQGEDESTG
DAPQANEGGGAGAVGGARPVKRARLSTTTEGGHVDAAPAAEETVRGGRGA
GAGIVNGLHHAEGLCVSARNLRKKRPGEAAALFRRALEIEEAKLGPDDVQ
VAVTLQELARCVRKAGKHGEAEALLRRALEIKEAKLGPDDVGVAYTLHEL
ALSVRGAGKYGEAGALLRRALEIEEAKLGPDDVQVAVTLYELARCVRKAG
KYGEAEALFRRALEIKEAKLGPDDVGVAVTLYKLARCVREAGKYGEAEAL
LRRALEIEEAKLGPDDVQVAVTLYQLAQCVREAGKYGEANALLRRALEIQ
EAKLGPDDVGVAYTLHELARCVREAGKHGEAEALLRRALEIKEAKLGPDD back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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