prot_S-firma_M_contig967.20662.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig967.20662.1
Unique Nameprot_S-firma_M_contig967.20662.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length978
Homology
BLAST of mRNA_S-firma_M_contig967.20662.1 vs. uniprot
Match: A0A6H5KYR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR5_9PHAE)

HSP 1 Score: 706 bits (1823), Expect = 6.370e-239
Identity = 528/914 (57.77%), Postives = 587/914 (64.22%), Query Frame = 0
Query:    7 EEDVLRSFLEDLMHAEPHLQACLLDRSTAGAASKRQPPQTSREDGRPDHHQQLELGTAQQQQPAARSLEPLRGRLRELATLQVSDERPSPGTRTSMPGALAAGVSPGLVYSVIDALVRFVTRLLPLVDPVTTCSAGARSAQQHQPXXXXXXXXTAKGLVDLALLCLANLLESPSWRHVFFRVLHEVQRELQRHQXXXXXXXXXXXXTGGGGATPSGASVSFAEHLWKRIVVDAGAVPGDAARPGAKAPLPSPPPASAEPRPVLPGVDHVAVRLCCSMVRHCPLSFSASSYAALAPHLTDYLLGGXXXXXXXXXXXXXXXXTNTNKETASHQ-----------DLTLLLDLFAACARGSPHFRQYVKGLRRKRELFRRLLGFLGPRCDGVVVVRALCTLTRVLAGDPLEGKVFDRGNALETASLVMDNLLDLTG-----SCDGGIG-----GGGGAGTLGEQRRYADVASDLARSHVFTSVLLDTGRLESFLREAVAVLSQTAADVSGRLSADGATTGQPQ-------------QQRMARPEPLLRALCSFCLEHSPARSTFIKALLGKRAADQTAAVRLDDENSDAGLSGASENCSSSTSSPPADTAEPCVALFLLCLHPHPPSAAAASTLLQCLLVGGGALGAVSGPSPGAAAGVGVIPAGFTLTPTAGG-SGAWGRGAGIGREDPLQAALLERIGAVALGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------CGLVSLTAAGGASSPSTWPG---ALKLLVVRLGQIGGDLASASAKQQLGLAEPGGAXXXXXXXXXXXXXXXXXXXXLKARAVELEQELTSVLCLLSSLVLAVPAAGCALGRALPLEAAIAPILAAQRAVLAGTDPADYPRAPVEIILVALTLLAQLGMELTG 876
            EED+LRSFL ++  AEP LQ  L  RS            ++R+ G+ +  Q L   TA           PLR +LREL+ L VSD+ PSPG    +  A A   SPGLVY+ +DALVR V RLL LVD  ++ +     +    P            LVDL LLCLANL ESPSWRHVFFRVLHEVQ E Q  +  XXXXXXXXXX                E+LW+R+VV      G AA             + A P P  P V   AVRLCCSMVRHCPLSFSASSYA+LAP+LT+YLLG   XXXXXXXXXXXXXX      ++S             DL ++LDLFAACARGSPHFRQYVKGLRRKRELFRRLLG LGP CDG +VVRALC LTRVLAGDPLEGKVFDRGNALETASLV+DNLLDL+G     +C   +       G G G LGEQRR+ADVAS+LARS VFTSVL+DTGRL SFL EAVAVL++ AADV GRLS D A  G                Q+   RPEPLLRALCSFCLEHSPARSTFI+ALL                     L+                 A+PC ALF+LCLHPH PSAAAASTLLQCLLVGGGALGAVSGPS GAAAGVGVIPAGF L PT  G S      AGIGREDPLQAALLERIGAVALGGGR             XXXXXXXXXXXXXXXXXXXXXXXXXXX       CG      AG A + S + G    L LLV+RL QIGGDLASA AKQQLGL+ P                       LKARAVE+E ELTSVLCLLSSL LAVPAAG AL RALPLEAA AP+LAAQR VL+GTDPAD+PRAPVEI+LV+LTL+AQLG++L+G
Sbjct:    6 EEDLLRSFLNEVADAEPSLQTFLSRRSKHEGTPGNSGDGSARQQGQREAAQ-LTAWTAG----------PLRRKLRELSALHVSDDGPSPGGTGGVSAAFAVAASPGLVYAALDALVRLVLRLLLLVDAASSDATPTLLS----PKQESADALPLASLVDLTLLCLANLAESPSWRHVFFRVLHEVQLEQQHSRGGXXXXXXXXXXXX--------XXXXLQEYLWRRVVVADRTTAGGAAM------------SEARPSPPAPAVHLAAVRLCCSMVRHCPLSFSASSYASLAPYLTEYLLGEGGXXXXXXXXXXXXXXXXXXXXSSSRSNDSKGGWGAQTDLMVVLDLFAACARGSPHFRQYVKGLRRKRELFRRLLGLLGPMCDGRIVVRALCALTRVLAGDPLEGKVFDRGNALETASLVIDNLLDLSGYSERVACVDSLTPKHGRAGAGRGRLGEQRRFADVASELARSQVFTSVLVDTGRLASFLGEAVAVLARAAADVFGRLSTDIAAAGTXXXXXXXXXXXXXXXQEDTTRPEPLLRALCSFCLEHSPARSTFIQALLDSSGXXXXXXXXXXXXXXXXTLA-----------------ADPCAALFVLCLHPHTPSAAAASTLLQCLLVGGGALGAVSGPSTGAAAGVGVIPAGFLLGPTGVGVSWTAAAAAGIGREDPLQAALLERIGAVALGGGRHSKWTPAAGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGDERSFRCGSGLEHPAGLADAASNFEGPGGGLSLLVLRLRQIGGDLASAQAKQQLGLSSPS----LVAARPAWPLSAAIGAGVLKARAVEMELELTSVLCLLSSLALAVPAAGRALARALPLEAAFAPVLAAQRCVLSGTDPADFPRAPVEIVLVSLTLIAQLGVKLSG 863          
BLAST of mRNA_S-firma_M_contig967.20662.1 vs. uniprot
Match: D8LJ54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ54_ECTSI)

HSP 1 Score: 407 bits (1045), Expect = 4.780e-123
Identity = 324/660 (49.09%), Postives = 347/660 (52.58%), Query Frame = 0
Query:  341 LLLDLFAACARGSPHFRQYVKGLRRKRELFRRLLGFLGPRCDGVVVVRALCTLTRVLAGDPLEGKVFDRGNALETASLVMDNLLDLTGSCDG-----------GIGGGGGAGTLGEQRRYADVASDLARSHVFTSVLLDTGRLESFLREAVAVLSQTAADVSGRLSADGATTGQPQQQRMARPEPLLRALCSFCLEHSPARSTFIKALLGKRAADQTAAVRLDDENSDAGLSGASENCSSSTSSPPADTAEPCVALFLLCLHPHPPSAAAASTLLQCLLVGGGALGAVSGPSPGAAAGVGVIPAGFTLTPTAGGSG--AWGRGAGIGREDPLQAALLERIGAVALGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------CGLVSLTAAGGASSPSTWPG---ALKLLVVRLGQIGGDLASASAKQQLGLAEPGGAXXXXXXXXXXXXXXXXXXXXLKARAVELEQELTSVLCLLSSLVLAVPAAGCALGRALPLEAAIAPILAAQRAVLAGTDPADYPRAPVEIILVALTLLAQLGMELTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKARQKRRERKDLARAARLRRFLGEQGAAGEAKLCLGHAACRAESKDLSRRAAALISLLQ 978
            ++LDLFAACARGSPHFRQYVKGLRRKRELFRRLLG LGP CDG +VVRALC LTRVLAGDPLEGKVFDRGNALETASLV+DNLLDL+   +            G  G GG+G LGEQRR+ADVASDLARS                                                                                                                                                 QCLLVGGGALGAVSGPS GAAAGVGVIPAGF L PT  G    A    AGIGREDPLQAALLERIGAVALGGGR                                               CG      AG A + S + G    L LLV+RL QIGGDLASA AKQ+LGL+ P                       LKARAVE+E ELTSVLCLLSSL LAVPAAG AL RALPLEAA  P+LAAQR VL GTDPAD+ RAPVEI+LV+LTL+AQLG+EL+G                    XXXXXXXXXXXXXXXXXXXX           R+D ARAARLRRFLGEQ AAGE KLCLGHAACRAESKDL+RRAAALISLLQ
Sbjct:    2 VVLDLFAACARGSPHFRQYVKGLRRKRELFRRLLGLLGPMCDGKIVVRALCALTRVLAGDPLEGKVFDRGNALETASLVIDNLLDLSVCSERVVCVDNLTPRHGGAGAGGSGRLGEQRRFADVASDLARS-------------------------------------------------------------------------------------------------------------------------------------------------QCLLVGGGALGAVSGPSTGAAAGVGVIPAGFLLGPTGVGVSWAAAAASAGIGREDPLQAALLERIGAVALGGGRHSKRTPAAGRGGGAGVRRADGSRSSDESDGSEYAGIDDGDGDERSFGCGSGLEHPAGLADAASFFEGPGGGLSLLVLRLRQIGGDLASAQAKQKLGLSSPS----LVAARPAWPVSAATGAGALKARAVEMELELTSVLCLLSSLALAVPAAGRALARALPLEAAFGPVLAAQRCVLCGTDPADFSRAPVEIVLVSLTLIAQLGVELSGTGGGSGDAQSSGDDITASEAXXXXXXXXXXXXXXXXXXXXQG---------RQDAARAARLRRFLGEQAAAGEVKLCLGHAACRAESKDLARRAAALISLLQ 503          
BLAST of mRNA_S-firma_M_contig967.20662.1 vs. uniprot
Match: A0A835YU78_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU78_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.140e-23
Identity = 133/395 (33.67%), Postives = 167/395 (42.28%), Query Frame = 0
Query:  272 VDHVAVRLCCSMVRHCPLSFSASSYAALAPHLTDYLLGGXXXXXXXXXXXXXXXXTNTNKETASHQDLTLLLDLFAACARGSPHFRQYVKGLRRKRELFRRLLGFLGPRCDGVVVVRALCTLTRVLAGDPLEGKVFDRGNALETASLVMDNLLDLTG-SCDGGIGGGGGA--GTLGEQRRYADVASDLARSHVFTSVLLDTGRLESFLREAVAVLSQTAADVSGRLSADGATTGQPQQQRMARPEPLLRALCSFCLEHSPARSTFIKALLGKRAADQTAAVRLDDENSDAGLSGASENCSSSTSSPPADTAEPCVALFLLCLHPHPPSAAAASTLLQCLLVGGGALGAVSGPSPGAAAGVGVIPAGFTLTPTAGGSGAWGRGAGIGREDPLQAAL 663
            +DHV+ RL   +++  PL   ASSYAALAP L D+LL                  +     TA+ Q         A    GS        GL  ++ LFR L+GFLGP+    +V R+L  LTR LAGD LE KVF+  NA +TA+L +  LLDL+G SC   +          L  QR  ADV  DLARS   +SVL  +G+L  F   A A L+  +        AD               E LL AL    ++H+P+R+  I AL+G                                    AD A P  AL  L  H H P+A AA  LLQ LL  GG    V                   L  ++GGSG  G GA  G  D LQ AL
Sbjct:   72 IDHVSARLLTHLLQCAPLLLPASSYAALAPPLVDFLLN----------------YSGPVAATAAAQ---------ATAGGGSEGDLVIATGLLARKALFRCLMGFLGPQNGTQLVARSLSALTRALAGDQLETKVFEPNNATQTATLAVVKLLDLSGRSCWTLLXXXXXXXXSPLPLQRLCADVVGDLARSPALSSVLDASGQLRDFAARAAAALAPYSPSPR-HPPADHXXXXXXXXXXXX--EALLAALAHLAVDHAPSRAAAIGALVG------------------------------------ADRA-PLRALAALAAHAHAPTARAACELLQRLLGTGGGADTV------------------LLRASSGGSGDGGEGAQGG--DALQVAL 381          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig967.20662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KYR5_9PHAE6.370e-23957.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ54_ECTSI4.780e-12349.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YU78_9STRA3.140e-2333.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 189..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig967contigS-firma_M_contig967:20221..25078 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig967.20662.1mRNA_S-firma_M_contig967.20662.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig967 20207..25078 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig967.20662.1 ID=prot_S-firma_M_contig967.20662.1|Name=mRNA_S-firma_M_contig967.20662.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=978bp
MSRHHGEEDVLRSFLEDLMHAEPHLQACLLDRSTAGAASKRQPPQTSRED
GRPDHHQQLELGTAQQQQPAARSLEPLRGRLRELATLQVSDERPSPGTRT
SMPGALAAGVSPGLVYSVIDALVRFVTRLLPLVDPVTTCSAGARSAQQHQ
PQQPSPSAPTAKGLVDLALLCLANLLESPSWRHVFFRVLHEVQRELQRHQ
QQQQQQQQSRAGTGGGGATPSGASVSFAEHLWKRIVVDAGAVPGDAARPG
AKAPLPSPPPASAEPRPVLPGVDHVAVRLCCSMVRHCPLSFSASSYAALA
PHLTDYLLGGSSSSSGGGGGGGGTAATNTNKETASHQDLTLLLDLFAACA
RGSPHFRQYVKGLRRKRELFRRLLGFLGPRCDGVVVVRALCTLTRVLAGD
PLEGKVFDRGNALETASLVMDNLLDLTGSCDGGIGGGGGAGTLGEQRRYA
DVASDLARSHVFTSVLLDTGRLESFLREAVAVLSQTAADVSGRLSADGAT
TGQPQQQRMARPEPLLRALCSFCLEHSPARSTFIKALLGKRAADQTAAVR
LDDENSDAGLSGASENCSSSTSSPPADTAEPCVALFLLCLHPHPPSAAAA
STLLQCLLVGGGALGAVSGPSPGAAAGVGVIPAGFTLTPTAGGSGAWGRG
AGIGREDPLQAALLERIGAVALGGGRGGGGPAATDRDSGAGSRGSESDDI
DDDGEVWLGCGPGNGGGCGLVSLTAAGGASSPSTWPGALKLLVVRLGQIG
GDLASASAKQQLGLAEPGGAGSGGAGSSSPCAARGGGGGGLKARAVELEQ
ELTSVLCLLSSLVLAVPAAGCALGRALPLEAAIAPILAAQRAVLAGTDPA
DYPRAPVEIILVALTLLAQLGMELTGGGGGGGGGGGGPEARSSGDGDDDT
GGDPATSESDKQEGRRRRAKARQKRRERKDLARAARLRRFLGEQGAAGEA
KLCLGHAACRAESKDLSRRAAALISLLQ
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