prot_S-firma_M_contig9662.20657.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9662.20657.1
Unique Nameprot_S-firma_M_contig9662.20657.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length251
Homology
[Close]
BLAST of mRNA_S-firma_M_contig9662.20657.1 vs. uniprot
Match: A0A6H5KNF9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNF9_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.070e-15
Identity = 49/91 (53.85%), Postives = 58/91 (63.74%), Query Frame = 0 
Query:    1 DPKGYLPVQRAAVKGQTSALRELLSNCSS--GKGRRSVLPRLDLDATVADSGKTAMCLAARKGHVEVVQMLLGAGANPSVADNRRWTPLHF 89
            DPKGYLP+QRAA  G T+ALRELLS  S+   K R+  + ++DLDATV  SGKT               MLLGAGA+ S+AD R WT LHF
Sbjct:   26 DPKGYLPIQRAAANGLTAALRELLSTSSTTINKRRKRGIGKIDLDATVPQSGKT---------------MLLGAGASASLADRRGWTALHF 101
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9662.20657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNF9_9PHAE2.070e-1553.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 115..144
e-value: 0.11
score: 21.6
coord: 49..78
e-value: 7.4E-5
score: 32.1
coord: 3..33
e-value: 2400.0
score: 2.1
coord: 82..111
e-value: 0.022
score: 24.0
coord: 181..210
e-value: 14.0
score: 14.6
coord: 148..177
e-value: 6.6E-4
score: 29.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 49..81
score: 12.957
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 115..147
score: 9.324
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 148..180
score: 11.487
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 82..114
score: 9.725
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 11..109
e-value: 1.3E-13
score: 51.3
coord: 122..202
e-value: 9.7E-15
score: 54.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..202
score: 45.625
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 148..251
e-value: 5.8E-21
score: 76.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..147
e-value: 4.3E-33
score: 116.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..249
NoneNo IPR availablePIRSFPIRSF000654ILKcoord: 3..41
e-value: 100.0
score: -0.8
coord: 81..150
e-value: 2.2E-8
score: 31.1
coord: 12..132
e-value: 2.1E-11
score: 41.0
coord: 141..216
e-value: 5.8E-7
score: 26.4
NoneNo IPR availablePANTHERPTHR24166FAMILY NOT NAMEDcoord: 102..251
coord: 2..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9662contigS-firma_M_contig9662:185..3103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9662.20657.1mRNA_S-firma_M_contig9662.20657.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9662 185..3103 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9662.20657.1 ID=prot_S-firma_M_contig9662.20657.1|Name=mRNA_S-firma_M_contig9662.20657.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=251bp
DPKGYLPVQRAAVKGQTSALRELLSNCSSGKGRRSVLPRLDLDATVADSG
KTAMCLAARKGHVEVVQMLLGAGANPSVADNRRWTPLHFAAWKGHLRVVW
ELLGAGVDCSPLSDKHWTPLLAAAVGGHSEVARQLIGAGASVAERTSNGW
NALHMASQAGHIDVVRALLVAGARPGAVGEKGWTALMAAAAEGHGAIVRE
LLLLLATEDKGKKKARGGNGDGGGGGGGGGIDARNGKGCTALIMAARNGF
A
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt