prot_S-firma_M_contig966.20654.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig966.20654.1
Unique Nameprot_S-firma_M_contig966.20654.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length454
Homology
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BLAST of mRNA_S-firma_M_contig966.20654.1 vs. uniprot
Match: A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE)

HSP 1 Score: 462 bits (1190), Expect = 4.710e-157
Identity = 272/450 (60.44%), Postives = 321/450 (71.33%), Query Frame = 0 
Query:   17 EKPFRDFSKKKRSLLAWSLRASSASDTEPQGRSNGHPKQTGRMSRTVPTDPAETDIAEFFNQETSSNRRC--PADRVDIDIDTLPNLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPNGGN-PSAGGNGRRKGEASGNRRGASRKQRQPRLKKDRARKARRTTGLSAPMLKVLLRGGPPAAAGVGGQAAAVPTVHGGDTHREYLDPT----------KAKYLVVNGQEDLSDSSIKGGRDRLGESMWRSVDPAGRGMR-GDLQATWLTTSSLEGGGRERGRLGDSVEELELRRIFSDERPPWDGTPAPLPAPRNVRRAISSLLMPDPDERLRDKLIKSRKAAAGIPVTASSTKDERDEELRPSNSTPSGRWEACPATPRALVAREEIKKLSEARRERDSAMAQRVRQAELRVCYNKIAPSEQLYRDTLQAARARFQVRGTVA 452
            +KPFR+FS+KKR+LLAWS+RA+SASD   Q  +N     T R+S TV +D   TDI EFFN E   + R   P DRV++D+DTLP LEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIP+ G+ PS GG         G ++G           + R  K RRTTGLSAPMLK LLRG  P   G GG A    + H     +E  +P           K  YLV++GQEDL+DSS+    ++L ES WRSVD  GRG   G+L++ WL TSS  G G  R RLG++ E  EL RIFS ERPPWDG PAPLPAP++ RRAISSLLMPDPDERLRDKLIKSRKAAAG+PVTASSTKDER+ ELRP N TP GRWE CPATPRA++AR+EI++LSE R ERD AMA++VRQAEL V + KIAPSE+LYR+TLQ A+ RF+ +GT A
Sbjct:   57 KKPFREFSRKKRNLLAWSIRAASASDAAAQSTANKTHMPTRRLSTTVRSDLDGTDIGEFFNMERGMSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGG-------IRGRKKGGGGHXXXXXXXRGRNSKPRRTTGLSAPMLKALLRGDTPT--GEGGAALVTASQH----QQELFEPNGNIVSRDSAPKPNYLVLDGQEDLTDSSVNS--EKLDESKWRSVDDLGRGEALGELES-WLQTSSHSGLGHGRRRLGNTKEGQELHRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFNPTPIGRWEVCPATPRAVIARQEIRRLSELREERDRAMAKKVRQAELSVLFKKIAPSEKLYRNTLQIAQERFRHQGTAA 490
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig966.20654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2S4_9PHAE4.710e-15760.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 393..413

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig966contigS-firma_M_contig966:442..3182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig966.20654.1mRNA_S-firma_M_contig966.20654.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig966 421..3636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig966.20654.1 ID=prot_S-firma_M_contig966.20654.1|Name=mRNA_S-firma_M_contig966.20654.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=454bp
MTSADIPRTASFMVDTEKPFRDFSKKKRSLLAWSLRASSASDTEPQGRSN
GHPKQTGRMSRTVPTDPAETDIAEFFNQETSSNRRCPADRVDIDIDTLPN
LEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPNGGNPSAGGNG
RRKGEASGNRRGASRKQRQPRLKKDRARKARRTTGLSAPMLKVLLRGGPP
AAAGVGGQAAAVPTVHGGDTHREYLDPTKAKYLVVNGQEDLSDSSIKGGR
DRLGESMWRSVDPAGRGMRGDLQATWLTTSSLEGGGRERGRLGDSVEELE
LRRIFSDERPPWDGTPAPLPAPRNVRRAISSLLMPDPDERLRDKLIKSRK
AAAGIPVTASSTKDERDEELRPSNSTPSGRWEACPATPRALVAREEIKKL
SEARRERDSAMAQRVRQAELRVCYNKIAPSEQLYRDTLQAARARFQVRGT
VAA*
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