prot_S-firma_M_contig9646.20645.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9646.20645.1
Unique Nameprot_S-firma_M_contig9646.20645.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length190
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9646.20645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 89..122
e-value: 14.0
score: 13.6
coord: 131..164
e-value: 14.0
score: 13.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 68..188
e-value: 1.8E-24
score: 88.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 85..183
NoneNo IPR availablePFAMPF13424TPR_12coord: 88..163
e-value: 4.5E-14
score: 52.5
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 84..179
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 89..164
score: 9.395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9646contigS-firma_M_contig9646:40..1600 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9646.20645.1mRNA_S-firma_M_contig9646.20645.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9646 40..1600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9646.20645.1 ID=prot_S-firma_M_contig9646.20645.1|Name=mRNA_S-firma_M_contig9646.20645.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=190bp
VKHGINPTPPLEAVASRQAKYLGRLDVVRGYANSGYDTSIGGGYSLMGYF
PLAALWRPVEEVSRCPRLQVETYGSSLKSLEEEESKDAADVYWAVGSLLE
FQGKLEEADLCFQRALATFEKVYGKDHIEVATMLDKRATLLKDQGKYEDA
DLMYLRAVAINEKVHGPEDAIVAASLNNRALGLDLQVRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat