prot_S-firma_M_contig9638.20636.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9638.20636.1
Unique Nameprot_S-firma_M_contig9638.20636.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length236
Homology
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BLAST of mRNA_S-firma_M_contig9638.20636.1 vs. uniprot
Match: A0A6H5L6T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T1_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.750e-26
Identity = 73/92 (79.35%), Postives = 74/92 (80.43%), Query Frame = 0 
Query:   41 ACRAAGCSNKPNGRTPFCWDHWSAARQXXXXXXXXXXXXXXXXCIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGSDL 132
            ACRA GC+N PNGRTPFCWDHWSAARQ                CIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGSDL
Sbjct: 1115 ACRAPGCTNPPNGRTPFCWDHWSAARQCQHAGCDKLSQGNTRLCIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGSDL 1206
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BLAST of mRNA_S-firma_M_contig9638.20636.1 vs. uniprot
Match: A0A7S2E348_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E348_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.980e-7
Identity = 57/89 (64.04%), Postives = 63/89 (70.79%), Query Frame = 0 
Query:   42 CRAAGCSNKPNGRTPFCWDHWSAARQXXXXXXXXXXXXXXXXCIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGS 130
            CR AGC  K   R+P+C  H  + R+    XXXXXXXXXXXX     GGRRCTHPGC +GARDR+FXXXXXXXXXXXX     AAVGGS
Sbjct: 1048 CRMAGCDVKAGRRSPYCISHMGSQRRCSFAXXXXXXXXXXXXXXXXXGGRRCTHPGCTRGARDRYFXXXXXXXXXXXXDECFKAAVGGS 1136
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BLAST of mRNA_S-firma_M_contig9638.20636.1 vs. uniprot
Match: A0A7S2KTT1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTT1_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 7.490e-6
Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 0 
Query:   84 CIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGSDL 132
            CIAHGGGRRCT PGC+KGARD+F XXXXXXXXXXX      +AVGGS+L
Sbjct:    8 CIAHGGGRRCTFPGCDKGARDKFXXXXXXXXXXXXNSECCKSAVGGSNL 56
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BLAST of mRNA_S-firma_M_contig9638.20636.1 vs. uniprot
Match: A0A835ZHF7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHF7_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 8.290e-6
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 0 
Query:   84 CIAHGGGRRCTHPGCNKGARDRF 106
            CIAHGGGRRCTHPGC KGARDRF
Sbjct:    8 CIAHGGGRRCTHPGCTKGARDRF 30
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9638.20636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6T1_9PHAE2.750e-2679.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2E348_9STRA1.980e-764.04Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2KTT1_9STRA7.490e-675.51Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A835ZHF7_9STRA8.290e-695.65Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31827FAMILY NOT NAMEDcoord: 122..216
coord: 24..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9638contigS-firma_M_contig9638:1207..3754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9638.20636.1mRNA_S-firma_M_contig9638.20636.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9638 1207..3755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9638.20636.1 ID=prot_S-firma_M_contig9638.20636.1|Name=mRNA_S-firma_M_contig9638.20636.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=236bp
SRSKTLSPGARGGRTASYPPSTAAPAPAPAAEAAAPGSAVACRAAGCSNK
PNGRTPFCWDHWSAARQCQHAGCDKLSQGNTRLCIAHGGGRRCTHPGCNK
GARDRFFCAAHGGGKRCSVADCGKAAVGGSDLCTGHGGGKRCQFPNCPKS
AQSKTNFCVRHGGGRKCSIAGCLKVARGRTEHCAAHGGGVRCCVESCNKA
AVGRERMCRSHQRKSKNAAAAAGGGSAVPATPASAA
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