prot_S-firma_M_contig9636.20634.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9636.20634.1
Unique Nameprot_S-firma_M_contig9636.20634.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length340
Homology
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BLAST of mRNA_S-firma_M_contig9636.20634.1 vs. uniprot
Match: D8LH61_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH61_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 5.390e-82
Identity = 185/348 (53.16%), Postives = 223/348 (64.08%), Query Frame = 0 
Query:    1 GTDASRVSSVLLSQREDGNSLLWQSVRGLWSDLMALRSVANNGEG--LSEVEQLAVGSKVVFEKVSIYAADIRKSAP--TASELAEQASSLRLAAKDLLRSAVIGTGVQNAANLSALCPRAMWHAVAPWLAGDANHRPSDPSDSGSSIPAPCVSRAERVRTSLEEAIDLKPELEVAKAQNADLAVELASKSKEFMAATSKREQLETLLEKAEGSQVASTDLQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTLKMGSPPKGRSG--SASSGKLAQSVGSRSASSSGNLTGKRGSATDVSGKGVFAMG---STTVASQERESEESLTSVLNWSRAEVAR 339
            G DA RVS VL+SQREDG S+LW+SVRGLW DLMALRSVA NG G   +E+EQ+A+G+K V EKVS +A D RK AP  TASELA+Q +SLR AAKDLLRS     GVQ+  ++    PRA W AVAPWLA D +    +  D  SS+PAPCVSRAE +R  LEEAI+LKPELE A+AQ AD+ VELA+KSKE + ATSKREQLE LLEK EGSQ+ S DLQK                                     R+LK+G+   GR+     SSGKL+Q +G+RS  S   + G+ G  TDV  KG   M     + VAS +  +EESLTSVL WS+AEV+R
Sbjct:  877 GADAPRVSRVLVSQREDGVSMLWKSVRGLWGDLMALRSVAYNGCGNMSAELEQVALGAKEVLEKVSTHAVDHRKGAPDPTASELAKQVTSLRPAAKDLLRSPTTDAGVQDGTHMPPF-PRATWRAVAPWLAQDTSRSSGEADDVASSMPAPCVSRAEGIRMMLEEAIELKPELEAARAQTADMTVELAAKSKELIVATSKREQLEVLLEKTEGSQITSADLQKQVLVLQETSRKFEQENKFIAEALEDLQDSTSRLEAENRSLKVGASTTGRASLSGGSSGKLSQPIGTRSTPSISRVPGREGPTTDVPVKGASVMAVLPGSAVASPD--TEESLTSVLKWSQAEVSR 1221
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9636.20634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH61_ECTSI5.390e-8253.16CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..189
NoneNo IPR availableCOILSCoilCoilcoord: 214..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9636contigS-firma_M_contig9636:826..3582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9636.20634.1mRNA_S-firma_M_contig9636.20634.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9636 826..3582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9636.20634.1 ID=prot_S-firma_M_contig9636.20634.1|Name=mRNA_S-firma_M_contig9636.20634.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=340bp
GTDASRVSSVLLSQREDGNSLLWQSVRGLWSDLMALRSVANNGEGLSEVE
QLAVGSKVVFEKVSIYAADIRKSAPTASELAEQASSLRLAAKDLLRSAVI
GTGVQNAANLSALCPRAMWHAVAPWLAGDANHRPSDPSDSGSSIPAPCVS
RAERVRTSLEEAIDLKPELEVAKAQNADLAVELASKSKEFMAATSKREQL
ETLLEKAEGSQVASTDLQKQVVLLQETSNKLEQENKFMAEALEDLQDSTS
RLEAENRTLKMGSPPKGRSGSASSGKLAQSVGSRSASSSGNLTGKRGSAT
DVSGKGVFAMGSTTVASQERESEESLTSVLNWSRAEVAR*
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