prot_S-firma_M_contig9627.20629.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9627.20629.1
Unique Nameprot_S-firma_M_contig9627.20629.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length209
Homology
BLAST of mRNA_S-firma_M_contig9627.20629.1 vs. uniprot
Match: A0A6H5JWF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF8_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 9.310e-46
Identity = 88/182 (48.35%), Postives = 111/182 (60.99%), Query Frame = 0
Query:   12 VLYPTQVVNLDKDRRHVLFYIAGWMLSSALTRVTRDSRLRSSFMPFVNVHKYDTAEAFLSAHPSYAGVEFEVTDRNVSWNGKVFFFASAPFFEFAFALERGYHHALKNPVLLATYLGDMPMAIFHVVSSAAAVKEAWSNCVQIVR---GAGVVDGDTAGKFEDLFNFLLLKWHRCRISACLK 190
            V YPT   +L +DRR V+++++GW+LSSAL+ VTR  R   +F  FVN H+Y+ A  F+  HP   G+E EV  RNV W G    FA A FFEF + LE GY HALK P L ATY GD+P  I  VVSSA  VK A+  CV  +R   G GVV       +  LF+F LLKWH  R++  +K
Sbjct:   56 VEYPTTRYDLAQDRREVVYFLSGWLLSSALSHVTRHKRDCPAFTSFVNSHQYEDAAQFVKVHPGLKGLEREVDRRNVKWRGLSLIFADASFFEFVYTLEDGYLHALKQPALFATYQGDLPAKILEVVSSATPVKMAFRRCVDSIRKEAGKGVV----MRSYGVLFDFFLLKWHNMRMADYVK 233          
BLAST of mRNA_S-firma_M_contig9627.20629.1 vs. uniprot
Match: A0A6H5KPL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPL9_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 8.560e-45
Identity = 87/178 (48.88%), Postives = 108/178 (60.67%), Query Frame = 0
Query:   12 VLYPTQVVNLDKDRRHVLFYIAGWMLSSALTRVTRDSRLRSSFMPFVNVHKYDTAEAFLSAHPSYAGVEFEVTDRNVSWNGKVFFFASAPFFEFAFALERGYHHALKNPVLLATYLGDMPMAIFHVVSSAAAVKEAWSNCVQIVR---GAGVVDGDTAGKFEDLFNFLLLKWHRCRIS 186
            V YPT    LD+DRR V+++++GW+LSSAL+ VT   R   +F  FVN H+Y+ A  F+  HP   G+E EV  RNV W G    FA A FFEF + LE GY HALK P L ATY GD+P  I  VVSSA  VK A+  CV  +R   G GVV       +  LF+F LLKWH  R++
Sbjct:  165 VEYPTTRYELDQDRREVVYFLSGWLLSSALSHVTSHKRDGPAFTSFVNSHQYEDAAQFVKVHPGLKGLEREVDRRNVKWRGLSLIFADASFFEFVYTLEDGYLHALKQPALFATYQGDLPAKILEVVSSATPVKMAFRRCVDSIRKEAGKGVV----MRSYGVLFDFFLLKWHNMRMA 338          
BLAST of mRNA_S-firma_M_contig9627.20629.1 vs. uniprot
Match: A0A6H5KLR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLR4_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 5.040e-29
Identity = 60/116 (51.72%), Postives = 78/116 (67.24%), Query Frame = 0
Query:   12 VLYPTQVVNLDKDRRHVLFYIAGWMLSSALTRVTRDSRLRSSFMPFVNVHKYDTAEAFLSAHPSYAGVEFEVTDRNVSWNGKVFFFASAPFFEFAFALERGYHHALKNPVLLATYL 127
            V YP + V+LD  +R +++ IAGW+LSSAL+RV+R   L S+F+PF N HK  +AE F  A+P ++G+EF V +RN  W GK   FASA FF F  ALE GY  +L NP LLA  L
Sbjct:  154 VAYPAEDVDLDVHQRRLVYNIAGWLLSSALSRVSRQRSLGSAFLPFFNSHKVASAEEFREAYPHFSGLEFVVEERNNPWEGKGLIFASADFFLFVRALESGYRSSLLNPALLAAPL 269          
BLAST of mRNA_S-firma_M_contig9627.20629.1 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 8.430e-16
Identity = 49/139 (35.25%), Postives = 70/139 (50.36%), Query Frame = 0
Query:   13 LYPTQVVNLDKDRRHVLFYIAGWMLSSALTRVTRDSRLRSSFMPFVNVHKYDTAEAFLSAHPSYAGVEFEVTDRNVSWNGKVFFFASAPFFEFAFALERGYHHALKNPVLLATYLGDMPMAIFHVVSSAAAVKEAWSNC 151
            L P++   + + R  VL+YIAGW  S ALT   R + L   ++  V  +   ++   +  +         V  +N   NG    + +  + EF +A+ERG  H LKNP+ LA  LG +P  IF VVS A  VKE W NC
Sbjct:  170 LVPSERYQISRPRGQVLYYIAGWAASKALTHQARHN-LSQDWVRVVQHNTRRSSREAIFTNVMLRDFVAGVDQKNDLKNGPGLLYPTMDWVEFVYAVERGIFHFLKNPIFLAACLGGLPAEIFKVVSEAEVVKEMWGNC 307          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9627.20629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JWF8_9PHAE9.310e-4648.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPL9_9PHAE8.560e-4548.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLR4_9PHAE5.040e-2951.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K201_9PHAE8.430e-1635.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9627contigS-firma_M_contig9627:2903..3529 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9627.20629.1mRNA_S-firma_M_contig9627.20629.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9627 2399..3959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9627.20629.1 ID=prot_S-firma_M_contig9627.20629.1|Name=mRNA_S-firma_M_contig9627.20629.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=209bp
MGALGDVCRAIVLYPTQVVNLDKDRRHVLFYIAGWMLSSALTRVTRDSRL
RSSFMPFVNVHKYDTAEAFLSAHPSYAGVEFEVTDRNVSWNGKVFFFASA
PFFEFAFALERGYHHALKNPVLLATYLGDMPMAIFHVVSSAAAVKEAWSN
CVQIVRGAGVVDGDTAGKFEDLFNFLLLKWHRCRISACLKCRRAKRRRRR
ALPPSVTS*
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