prot_S-firma_M_contig960.20600.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig960.20600.1
Unique Nameprot_S-firma_M_contig960.20600.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length832
Homology
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BLAST of mRNA_S-firma_M_contig960.20600.1 vs. uniprot
Match: A0A6H5KW23_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW23_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 3.900e-38
Identity = 282/374 (75.40%), Postives = 295/374 (78.88%), Query Frame = 0 
Query:    1 MRDQQAMVELLLKNGADPDVHDNGEGLTPLMWAAQLGHAGVVTSLLQGGADMEQEDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVELLKAREPGIKGGKRGDNSEGGRVGSGRLVRAWGGG---------------GSGNIG----------GSFXXXXXXXXGSLAPTHGLPSEVVDIRNHFRATPLHRAAAKGHAEVVTMLVQNGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPGTKAQGGVTPLIAARKPEVRELVREALATRKGSSLWEIDVS 349
            MRDQQAMVELLLK GADPDVHDNGEGLTPLMWAAQLGHA V  SL++GGADMEQE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ELL+ R    +   RG                W GG                  N+G             XXXXXXX GS +    LPSEVVDIRNHF ATPLHRAAAKGHAEVVTMLVQNGA++XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DP  KAQ GVTPLIAARKPEVREL+++AL  RK  SLWE+D+S
Sbjct:   77 MRDQQAMVELLLKEGADPDVHDNGEGLTPLMWAAQLGHAEVANSLIEGGADMEQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLRQRSGRARA--RGXXXXXXXXXXXXXXXFWEGGLARAXXXXXXXXXXXXXXNVGERRGTXXXXXXXXXXXXXXXGGSRSVAAPLPSEVVDIRNHFHATPLHRAAAKGHAEVVTMLVQNGASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAIKAQQGVTPLIAARKPEVRELLKKALEKRK-KSLWEVDLS 447
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BLAST of mRNA_S-firma_M_contig960.20600.1 vs. uniprot
Match: D8LSH4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH4_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 6.460e-34
Identity = 274/362 (75.69%), Postives = 283/362 (78.18%), Query Frame = 0 
Query:    1 MRDQQAMVELLLKNGADPDVHDNGEGLTPLMWAAQLGHAGVVTSLLQGGADMEQEDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVELLKAREPGIKGGKRG--------DNSEGGRVGSGRLVRAWGGG-----GSGNIG-----------------------GSFXXXXXXXXGSLAPTHGLPSEVVDIRNHFRATPLHRAAAKGHAEVVTMLVQNGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPGTKAQGGVTPLIAARKPE 326
            MRDQQ MVELLLK GADPDVHDNGEGLTPLMWAAQLGH  V  SL++GGADMEQEDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ELL+ R    +   RG        D+  GG      L RAWGGG     GSGN+G                          XXXX     S +    LPSEVVDIRNHF ATPLHRAAAKGHAEVVTMLVQNGA++XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DP  KAQ GVTPLIAARKPE
Sbjct:   83 MRDQQGMVELLLKEGADPDVHDNGEGLTPLMWAAQLGHTEVANSLIEGGADMEQEDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLRQRSGRARA--RGXXXXXXXXDDGSGGDFWESGLARAWGGGXXXXXGSGNVGERGGXXXXXXXXXXXXXXXXXFKXXXXXXXVGRGASRSVAAPLPSEVVDIRNHFHATPLHRAAAKGHAEVVTMLVQNGASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAIKAQQGVTPLIAARKPE 442
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig960.20600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW23_9PHAE3.900e-3875.40Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LSH4_ECTSI6.460e-3475.69Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 74..88
score: 41.65
coord: 26..41
score: 40.75
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 25..54
e-value: 0.015
score: 24.5
coord: 281..310
e-value: 0.011
score: 24.9
coord: 157..185
e-value: 180.0
score: 10.5
coord: 91..123
e-value: 0.0076
score: 25.5
coord: 124..153
e-value: 120.0
score: 11.6
coord: 58..87
e-value: 4.9E-4
score: 29.4
coord: 248..277
e-value: 4.0E-5
score: 33.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 91..123
score: 10.579
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 25..57
score: 12.716
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 58..90
score: 12.583
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 124..156
score: 10.125
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 248..280
score: 14.078
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 281..313
score: 9.698
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 93..186
e-value: 2.3E-22
score: 81.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 235..366
e-value: 4.5E-25
score: 90.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..92
e-value: 3.0E-28
score: 100.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 7..322
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 6..88
e-value: 3.1E-14
score: 53.3
coord: 96..179
e-value: 1.8E-8
score: 34.8
coord: 243..311
e-value: 4.6E-10
score: 40.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..322
score: 64.675
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 56..322
coord: 6..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig960contigS-firma_M_contig960:20912..25625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig960.20600.1mRNA_S-firma_M_contig960.20600.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig960 19132..25664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig960.20600.1 ID=prot_S-firma_M_contig960.20600.1|Name=mRNA_S-firma_M_contig960.20600.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=832bp
MRDQQAMVELLLKNGADPDVHDNGEGLTPLMWAAQLGHAGVVTSLLQGGA
DMEQEDREDLTALHWAARLGQEGVVLVLLEHGADVEAIDYDGNTPLIWAT
RGGHRACVGHLLDNGASTKTPDENGNTALHFSCQTGNAGITSDLLDWGAL
ATAQDYWEFTPFHRACSQGHGDVLVELLKAREPGIKGGKRGDNSEGGRVG
SGRLVRAWGGGGSGNIGGSFRRGGGGGSGSLAPTHGLPSEVVDIRNHFRA
TPLHRAAAKGHAEVVTMLVQNGANIDARDGFFYTPLHLACVNGAAACVEV
LLLAGADPGTKAQGGVTPLIAARKPEVRELVREALATRKGSSLWEIDVSG
QGTVDGGSEQGDGEGQAGGDTSGRREDTAAASTTADLAAAIPAALATSST
AGGMDVDTDAGSRRESGTLASFRGDWDAEMRPARSSGVEPADSGKAATPR
GRPMSRLPREEVRRAGTSARPRRSSTGSMLEKLFNSSSGPYQPQKMKDAV
AAVTAAGELASTSPAITESSTVSSTGSSTDLSDDSNSSGTGATAPTEGDG
IPDAFEAAADVPVLPPAQMIPETPLHLAPRHPPSHSPQISATTTTAAAAD
VAGKSVATVALEMPQFVRAPQEMASPPTLPRVVSAEDGDVQETTGAFVTS
TELSSPSGAPPLGDPDKGVPAPATDAGAVQDGVDESGDSIGEAGVATAEV
ATSTTLAAAVGRGGGGGGGGSTGGREHDEPASAPARVRAKKRRAKSLPPS
SRRDRRPRGPRPCLEGPAAVIKTLTLEDDDVDDGEAWALSQWLHGATGSV
TTAAASGGGGEDSPPPSPSMVPMRRATTLVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt