prot_S-firma_M_contig956.20555.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig956.20555.1
Unique Nameprot_S-firma_M_contig956.20555.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length248
Homology
BLAST of mRNA_S-firma_M_contig956.20555.1 vs. uniprot
Match: D8LI36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI36_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 3.090e-81
Identity = 132/166 (79.52%), Postives = 145/166 (87.35%), Query Frame = 0
Query:   66 KEQLDEVPLTISSAVCKDTKASLLAHIRDETLNFAGDTGAVGRIAVESKKKGRGLTFDLKGQQFRGQIVPSATILVVGVGRTEAKVEGLFSEVCRLDYKGNVLDAMGGEVLKGEMDDSYKFEEEDVNARGG-GGDGEGVGEDTGDGGKTPKLGRKKSFGKKKGGSS 230
            KE+LDEVPL +  AVCKD KASLL H+RDE LNFAGDTGA+GRI+V  KKKGRGLTFDLKGQQF GQI+PSAT++VVG+G+TEAKVEGLFSEVCRLDYKGNV DAMGGEVLKGEMDDSYKFEEEDVNARGG GGD      D G+ GK+PKL RKKSFGK +GGSS
Sbjct:   53 KEKLDEVPLIVPPAVCKDAKASLLVHLRDEALNFAGDTGAIGRISVGGKKKGRGLTFDLKGQQFSGQIIPSATVMVVGIGKTEAKVEGLFSEVCRLDYKGNVFDAMGGEVLKGEMDDSYKFEEEDVNARGGAGGDXXXXXRDKGEEGKSPKLTRKKSFGKGRGGSS 218          
BLAST of mRNA_S-firma_M_contig956.20555.1 vs. uniprot
Match: A0A803PRU0_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PRU0_CANSA)

HSP 1 Score: 63.2 bits (152), Expect = 7.130e-8
Identity = 41/126 (32.54%), Postives = 69/126 (54.76%), Query Frame = 0
Query:   52 EASGEPKTGSKARPKEQLDE------VPLTISSAVCKDTKASLLAHIRDETLNFAGDTGAVGRIAVESKKKGRG-LTFDLKGQQFRGQIVPSATILVVGVGRTEAKVEGLFSEVCRLDYKGNVLDA 170
            EAS + +   +  P++Q++        PL +S  V + TKA  L     ++++ AGD GAVGR+ +     G   +  DLKG  ++  IVPS T  VV  G++EAK+E + ++  +L  + NV ++
Sbjct:  207 EASDDVEMKEEGAPEKQVESRVSSGRFPLILSEKVQR-TKA--LVECEGDSIDLAGDIGAVGRVVISDAASGDPEMYLDLKGTIYKTTIVPSRTFCVVSFGQSEAKIEAIMNDFIQLKPQSNVFES 329          
BLAST of mRNA_S-firma_M_contig956.20555.1 vs. uniprot
Match: A0A7S3PWH9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWH9_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.140e-8
Identity = 44/141 (31.21%), Postives = 69/141 (48.94%), Query Frame = 0
Query:   67 EQLDEVPLTI------SSAVCKDTKASLLAHIRDE---TLNFAGDTGAVGRIAVESKKKGRGLTFDLKGQQFRGQIVPSATILVVGV----GRTEAKVEGLFSEVCRLDYKGNVLDAMGGEVLKGEMDDSYKFEEEDVNAR 194
            +Q+D V L I      S       + ++L  +  E   TL+F G  GAVGR  V        +  DLKG Q++G++    T L+  +    G    KVE +  E  +L   G+ +  +   V KGEMDDS++ ++ +VN+R
Sbjct:   18 DQIDSVDLKIPLSLLMSGTSSGSNECTVLVQVNPEDASTLDFHGAGGAVGRFEVNENA----VIMDLKGFQYQGKLEAGPTCLMGSMHPLMGERMIKVESITDEYVQLQKTGDHMAQLDAVVEKGEMDDSFRIKDNNVNSR 154          
BLAST of mRNA_S-firma_M_contig956.20555.1 vs. uniprot
Match: A0A2P6V702_9CHLO (DNA-binding BIN4-like isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V702_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 1.790e-6
Identity = 33/92 (35.87%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   98 NFAGDTGAVGRIAVESKKKGRGLTFDLKGQQFRGQIVPS-ATILVVGVGRTEAKVEGLFSEVCRLD----YKGNVLDAMGGEVLKGEMDDSY 184
            + +GD+GA+GR+ +   K+   L  D+KG  +   +VP  ATI ++ +G++EAKVE LF+E  +L     +  N  D +GG +++G+ D +Y
Sbjct:  221 DLSGDSGAIGRLMIGGSKEEPQLQLDVKGVLYNATVVPCPATIALINMGQSEAKVECLFTEFVQLREDTRFSFNDADQLGG-LVEGDDDGNY 311          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig956.20555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LI36_ECTSI3.090e-8179.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A803PRU0_CANSA7.130e-832.54Uncharacterized protein n=3 Tax=Cannabis sativa Ta... [more]
A0A7S3PWH9_9STRA9.140e-831.21Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2P6V702_9CHLO1.790e-635.87DNA-binding BIN4-like isoform A n=2 Tax=Micractini... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033246DNA-binding protein BIN4PANTHERPTHR34810FAMILY NOT NAMEDcoord: 23..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig956contigS-firma_M_contig956:12349..14402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig956.20555.1mRNA_S-firma_M_contig956.20555.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig956 12282..14971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig956.20555.1 ID=prot_S-firma_M_contig956.20555.1|Name=mRNA_S-firma_M_contig956.20555.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=248bp
MDDDRGNDSSNSGDGSDFEMITQTTQPSQTQSQTEPSQTQSETQLSQRDD
GEASGEPKTGSKARPKEQLDEVPLTISSAVCKDTKASLLAHIRDETLNFA
GDTGAVGRIAVESKKKGRGLTFDLKGQQFRGQIVPSATILVVGVGRTEAK
VEGLFSEVCRLDYKGNVLDAMGGEVLKGEMDDSYKFEEEDVNARGGGGDG
EGVGEDTGDGGKTPKLGRKKSFGKKKGGSSGPSSAGKKGSSKKARKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033246BIN4