prot_S-firma_M_contig956.20554.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig956.20554.1
Unique Nameprot_S-firma_M_contig956.20554.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length464
Homology
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: D8LI35_ECTSI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI35_ECTSI)

HSP 1 Score: 754 bits (1946), Expect = 3.820e-272
Identity = 394/474 (83.12%), Postives = 411/474 (86.71%), Query Frame = 0
Query:    1 MDFGEPSDDEADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGEGLETFVTGCYDGCLRVYGPGCKVVSLAKAHQSPVTALCAVPSSSTG--GAGRAAGFVSGSKDMTARLWRLAGSGSNASLEAAAVLRGHANSISTVYAV---SGGGSGTARAYTGDWSGHVCVWDVACLGEGGAEADSGGVSATQETKRRKTDKGAAAAAAE-VSEQTPLAGFRAHSQAVTGLAAPGSGSGGAGGGQTAV-----STLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLGSSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWITDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGKIVSGGEDGAVKTYLVPERHSD 463
            MDFGEPSDDEADAGKVRVKFVTK+PSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAG GLETFVTGCYDGCLRVYGPGCKV SL KAHQ+PVTALCAVPS + G  G   AAGF+SGSKDMTARLWR AGSG N+SLEAAA+LRGHANSIS  +A    SG   G  RAYTGDWSGHVC+WDVACL  G A+ D       Q TKRRKTD GAAA     V+E TPLA FRAH+QAVTGLA PG    G G  QTA      STLYS SLDRAVKTWDAERQDC+HTLNAPKAVTCLG SDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQW+T VKWAPGSETMVLSC  DG+VKLWDIRSTLPLHSAQAH+GKALCCGWQDGKIVSGGEDGAVKTY+VPER+ D
Sbjct:    1 MDFGEPSDDEADAGKVRVKFVTKVPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGAGLETFVTGCYDGCLRVYGPGCKVTSLEKAHQAPVTALCAVPSLAGGRPGGAHAAGFLSGSKDMTARLWRRAGSGGNSSLEAAAILRGHANSISAAHAAASGSGDSGGAPRAYTGDWSGHVCLWDVACLEGGHADGDD-----AQGTKRRKTDTGAAAXXXXXVTELTPLASFRAHAQAVTGLAGPG----GVGRPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTGVKWAPGSETMVLSCSHDGSVKLWDIRSTLPLHSAQAHRGKALCCGWQDGKIVSGGEDGAVKTYVVPERNHD 465          
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: A0A6H5KQ32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ32_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 2.430e-118
Identity = 181/209 (86.60%), Postives = 188/209 (89.95%), Query Frame = 0
Query:  261 TKRRKTDKGAAAAA-AEVSEQTPLAGFRAHSQAVTGLAAPGSGSGGAGGGQTAV-----STLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLGSSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWITDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGKIVSGGEDGAVKTYLVPERHSD 463
            TKRRKTD GAAAAA A V+E TPLAGFRAHSQAVTGL  PG    G GG QTA      STLYS SLDRAVKTWDAERQDC+HTLNAPKAVTCLG SDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQW+TDVKWAPGSETMVLSCG DGAVKLWDIRSTLPLHSAQAH+GKALCCGWQDGKIVSGGEDGAVKTY+VPER++D
Sbjct:   11 TKRRKTDTGAAAAAVAAVTELTPLAGFRAHSQAVTGLVGPG----GVGGPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQDGKIVSGGEDGAVKTYVVPERNND 215          
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: A0A836CE58_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE58_9STRA)

HSP 1 Score: 323 bits (829), Expect = 2.070e-102
Identity = 216/495 (43.64%), Postives = 266/495 (53.74%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDP-------------------PTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAG----AGEGLET-----FVTGCYDGCLRVYGP--GCKVVSLAKAHQSPVTALCAVPSSSTGGAGRAAGFVSGSKDMTARLWRLAGSGSNASL------------EAAAVLRGHANSISTVYAVSGGGSGTARAYTGDWSGHVCVWDVACL-GEGGAEADSGGVSATQETKRRKTDKGAAAAAAEVSEQTPLAGFRAHSQAVTG--LAAPGSGSGGAGGGQTAVSTLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCL---GSSDSGR---MLATGHPDARVRIWDTRTQ-GETLTRASLSSHKQWITDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGKIVSGGEDGAVKTYLV 457
            +VRVKFVTK+ SIRVT+ P+AVPE+L RYGLSEVVNHLLG +                    P PFD+L+ GRFLR+SL   M+ HA+SGE VLE+EYLPALRQPTE     QPDWVSA+A     AG G E        + CYDGCLR+YG   G  +   A+    P+TAL A                    D   R W LA                    E AAVL GH NS++ V     GG+ TA +  GDW G +C+WD+A   G  GA+A++GG       KRRK  + A  A A V E  P A F+AHSQAVTG  LA P               TLY+GS D ++K WDA+RQDCV T+   KAV C+   G  D+     +LATGHPD R+R+WD RT+ GETLT A+L++   W+  VKWA GS                   S   L +  AHKG ALC  W  G + SGG+DG V+T+ V
Sbjct:   29 QVRVKFVTKLASIRVTDLPIAVPETLGRYGLSEVVNHLLGLNADTSAAAAAPHDAAPPSSKAPIPFDILIDGRFLRTSLARYMRAHAVSGETVLELEYLPALRQPTEESADTQPDWVSALAACAGAAGTGGERVAGPFLASACYDGCLRLYGASGGLDIAHSARVSAQPLTALAAXXX-----------XXXXXXDDAERCWLLAXXXXXXXXXXXXXXXXXXXXEQAAVLSGHQNSVAAVSFSPAGGTHTAAS--GDWDGRMCLWDLAAAQGAAGADAEAGGPG----VKRRK--RAAGEADAVVVELEPTAVFKAHSQAVTGVYLAGP--------------DTLYTGSWDHSLKAWDAQRQDCVRTMACAKAVACMDAQGGDDAAAASGLLATGHPDGRIRVWDVRTKAGETLTLATLAARGGWVYGVKWAHGSAYNXXXXXXXXXXXXXXXXSGAALRTLPAHKGAALCVAWHAGGVASGGDDGVVRTFKV 490          
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: A0A8K1CSP5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSP5_PYTOL)

HSP 1 Score: 278 bits (710), Expect = 1.530e-85
Identity = 180/457 (39.39%), Postives = 249/457 (54.49%), Query Frame = 0
Query:   10 EADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGEGLETFVTGCYDGCLRVYGPGCKVVSLAKAHQSPVTALCAVPSSSTGGAGRAAGFVSGSKDMTARLWRLAGSGSNASLEAAAVLRGHANSISTVYAVSGGGSGTARAYTGDWSGHVCVWDVACLGEGGAEADSGGVSATQETKRRKTDKGAAAAAAEVSEQTPLAGF--RAHSQAVTGLAAPGSGSGGAGGGQTAVSTLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLGSSDSGRMLATGHPDARVRIWDTRTQ--GETLTRASLSSHKQWITDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGK-----IVSGGEDGAVKTYLV 457
            +++  +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD L+ G FLR+SL   MQR+A+S E++L +EY+ AL +P +    + PDWVSAV+ A    +  VTGCYDG +RVY    + ++  KAHQ  V A+           G+     S  KD   ++WR   + S+  L A A L GH NS+ T+   SGG     +A TG W   V VW +        E D+ G     E + +K  K +A ++  VS +   A      H+  VTG+A             T    + SG+ DR V+ WD     C  TL   +A+T +  + +G +L T HPD  VR+WD R    GE + + +  SH +W++ V+W   +E +  SCG DGAVK+WD+RST+P+H+  AH+GKAL   W+         VSGGED  +K Y V
Sbjct:    2 DSEGPQVRVKFVTKNAAIRVTETPFAVPTRLNRQGLSQVVNHLLNTTTPRPFDFLIDGVFLRTSLDKYMQRNAVSEESLLILEYVEALPEPEQKNETNHPDWVSAVSVA---KDVIVTGCYDGQVRVYDLKGECLASVKAHQGAVKAVSVQFIQ-----GKEYRITSSGKDQMGQVWRF--NASSKQLSAVAALTGHLNSVDTIQLHSGG----RQALTGSWDNTVRVWHL-------PEDDNAGED--DEAQPKKKQKNSAKSSGTVSFRQVEAEIILTGHTSYVTGVAFH----------PTQEDYVVSGASDRTVRFWDLTTHLCKQTLTGNRAITDISVNANGLVL-TAHPDNCVRLWDPRASQSGENIVQKTFQSHTEWVSAVEWHQQNENLFASCGYDGAVKVWDVRSTVPIHTIAAHEGKALDVAWRPVSEPAVAFVSGGEDKQLKVYSV 424          
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: A0A2D4C6Q8_PYTIN (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6Q8_PYTIN)

HSP 1 Score: 276 bits (707), Expect = 3.930e-83
Identity = 178/457 (38.95%), Postives = 247/457 (54.05%), Query Frame = 0
Query:   10 EADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGEGLETFVTGCYDGCLRVYGPGCKVVSLAKAHQSPVTALCAVPSSSTGGAGRAAGFVSGSKDMTARLWRLAGSGSNASLEAAAVLRGHANSISTVYAVSGGGSGTARAYTGDWSGHVCVWDVACLGEGGAEADSGGVSATQETKRRKTDKGAAAAAA--EVSEQTPLAGFRAHSQAVTGLAAPGSGSGGAGGGQTAVSTLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLGSSDSGRMLATGHPDARVRIWDTRT--QGETLTRASLSSHKQWITDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDG-----KIVSGGEDGAVKTYLV 457
            +++  +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD L+ G FLR+SL   MQRHALS E++L +EY+ AL +P++    + PDWVSAV+ A    +  VTGCYDG +RVY      ++  KAHQ  V A+    +             S  KD   ++WR   + +   L A A L GH NS+  +       +   RA TG W   V VW V      G+EA    VS  Q  K++K+D  ++   +  ++  +  L G   H+  VTG+A             T    + S   DR+++ WD     C  T+   +A+T +  + +G M+ T HPD  VR+WD R    GE+L + +  SH++W+  V W P +E + LS G DGAVK+WD+RST+PLH+  AH GKAL   W+         VSGGED  +K + V
Sbjct:  170 DSEGPQVRVKFVTKNAAIRVTETPFAVPMRLNRQGLSQVVNHLLNTAEPRPFDFLIDGNFLRTSLEKYMQRHALSEESMLTLEYVEALPEPSQKNETNHPDWVSAVSAA---QDIVVTGCYDGQVRVYDLEGNCLASVKAHQGAVKAVSVQLAKQN-----VFLITSSGKDQMGQVWRF--NAATRQLSAVASLTGHLNSVDAIAL----DARAERALTGSWDNTVRVWMV----PSGSEAVE--VSDAQPKKKQKSDAKSSGVVSFSQLEAEIVLVG---HTSYVTGVAFH----------PTDAHQVVSAGSDRSIRLWDLTTHQCKQTMKGNRAITSVSVNANG-MVVTAHPDHCVRLWDPRATQNGESLVQRTFQSHREWVNAVSWHPTNEHLFLSGGYDGAVKVWDVRSTIPLHTVAAHDGKALDVAWRPVDEPAVSFVSGGEDKQLKLFSV 592          
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: A0A1V9ZBE6_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBE6_9STRA)

HSP 1 Score: 261 bits (667), Expect = 2.500e-79
Identity = 174/449 (38.75%), Postives = 234/449 (52.12%), Query Frame = 0
Query:   12 DAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGEGLETFVTGCYDGCLRVYGPGCKVVSLAKAHQSPVTALCAVPSSSTGGAGRAAGFVSGSKDMTARLWRLAGSGSNASLEAAAVLRGHANSISTVYAVSGGGSGTARAYTGDWSGHVCVWDVACLGEGGAEADSGGVSATQETKRRKTDKGAAAAAAEVSEQTPLAGFRAHSQAVTGLAAPGSGSGGAGGGQTAVSTLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLGSSDSGRMLATGHPDARVRIWDTRTQ--GETLTRASLSSHKQWITDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGK---IVSGGEDGAVKTY 455
            +  ++RVKFVTK P IRVTETP AVP  L R GLS+VVNHLL    P PFD L+   FLR++L   + ++ L+ EAVLE+EY+ A  +P      D PDW+SAVA  G  +    TGCYDG LRV+      V+  KAH S + ++    ++           V+GSKD T + W+L    SN  L A  V  GH NS+ TV          A    GD++               AEA++      +  K++KT  G  A+  +   +  L G  A   AVT                T  ST YS ++DR++K WD   + C  T+     ++ L  S SG M+ T HPD  +R+WD R    G TL + +  SHKQW++ V+W+  SET  LS G DG VK+WD RS++PL +  AH GKAL   W  G+    VSGGED  +K Y
Sbjct:    4 EGAQIRVKFVTKNPEIRVTETPFAVPIKLARAGLSQVVNHLLATAEPKPFDFLIDDNFLRTTLEKYVVQNNLNDEAVLELEYVEAHLEPETKHSQDHPDWISAVAAHGGFV---ATGCYDGILRVFTTAGAPVAQIKAHDSVIKSVAMNGNT----------IVTGSKDHTLKTWKL----SNGKLTAVGVGAGHLNSVDTV----------AIDAEGDFALXXXXXXXXXXXSLAAEAEA----TDKSVKKQKTAGGTKASLVQAEAKLVLPGHTAAVVAVTFD-------------PTDSSTAYSAAMDRSIKLWDLSLERCKQTMAGSSTISALSVSTSG-MVLTAHPDTAIRLWDPRAAKTGTTLVQKTFQSHKQWVSAVQWS--SETQFLSAGYDGTVKMWDARSSIPLFTLAAHAGKALDAAWIQGEKPAFVSGGEDCQLKFY 405          
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: A0A1V9ZYX7_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYX7_9STRA)

HSP 1 Score: 255 bits (651), Expect = 6.030e-77
Identity = 169/450 (37.56%), Postives = 237/450 (52.67%), Query Frame = 0
Query:   11 ADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGEGLETFVTGCYDGCLRVYGPGCKVVSLAKAHQSPVTALCAVPSSSTGGAGRAAGFVSGSKDMTARLWRLAGSGSNASLEAAAVLRGHANSISTVYAVSGGGSGTARAYTGDWSGHVCVWDVACLGEGGAEADSGGVSATQETKRRKTDKGAAAAAAEVSEQTPLAGFRAHSQAVTGLAAPGSGSGGAGGGQTAVSTLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLGSSDSGRMLATGHPDARVRIWDTRTQ--GETLTRASLSSHKQWITDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGW---QDGKIVSGGEDGAVKTY 455
            AD  ++RVKF TK P IRVTETP AVP  L R GLS+VVNHLL    P PFD L+ G FLR++L   + +H L+ EAVLE+EYL A  +P      + PDW+SAVA   + +   VTGCYDG LRV+    ++V+  KAH S + A+                 VSGSKD + + W+     +N  + AA V   H NS+  V A+   G     A +G W   V +W +       AE +       ++ K++KT  G  A+  +   +  LAG   H+  V G+    S S          +  YS S+DR++K WD   + C  T+    +++ L  S SG +L+  HPD  +R+WD R    G  L + +  SHK W++ V+W+  +E   +S   DG VK+WD RS++PL + +AH GKAL   W        VSGGED  +K Y
Sbjct:    3 ADGAQIRVKFTTKNPEIRVTETPFAVPIRLARAGLSQVVNHLLNTSEPKPFDFLIDGNFLRTTLEKYVLQHNLNEEAVLELEYLEAQLEPEAKSSQNHPDWISAVASYDKYV---VTGCYDGILRVFLTSGELVAQIKAHDSVIKAVTM----------HGDVIVSGSKDQSFKSWKF----TNNKIVAATVGSSHLNSVDAV-AIDAQGQ---HALSGAWDNTVRLWAL------NAEPEE------KQVKKQKTSGGGLASLVQQEAKLVLAG---HTSNVVGVTFDPSSS----------NIAYSASMDRSIKIWDLALETCKQTMTGSSSISDLSVSKSGLVLS-AHPDTCIRLWDPRAANTGTALVQKTFQSHKLWVSAVEWSTETEHQFVSSSYDGTVKMWDARSSIPLFTLEAHTGKALDVAWVHQSKPAFVSGGEDCQLKFY 405          
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: A0A5D6YFB0_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFB0_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.220e-76
Identity = 176/459 (38.34%), Postives = 237/459 (51.63%), Query Frame = 0
Query:   10 EADAG-KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGEGLETFVTGCYDGCLRVYGPGCKVVSLAKAHQSPVTALCA--VPSSSTGGAGRAAGFVSGSKDMTARLWRLAGSGSNASLEAAAVLRGHANSISTV-YAVSGGGSGTARAYTGDWSGHVCVWDVACLGEGGAEADSGGVSATQETKRRKTDKGAAAAAAEVSEQTPLAGFRAHSQAVTGLAAPGSGSGGAGGGQTAVSTLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLGSSDSGRMLATGHPDARVRIWDTRTQ--GETLTRASLSSHKQWITDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGW--QDGKIV---SGGEDGAVKTYLV 457
            ++D G +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD LV G+FLR+SL   + +H  S EA+L +EY+ AL +P +   A+ PDWVSAVA A  GL   VTGCYDG +RV+    + V+  KAH   V A+    VP        R     +  KD T +LW      +   + A A   GH NS+  V   V+G      +A TG W   V VWD        A                     +A +  ++  +  L G   H+  VTG+A                  + SG+ DR+V+ WD     C  TL   +A+T +  +  G +L+  HPD  VR+WD R    GE+L + + SSHK+W++ V+W P   T+  S   DG+VK+WD RS++PLH+  AH GKAL   W  +D   V   SGGED  +K + V
Sbjct:    4 DSDGGAQVRVKFVTKDAAIRVTETPFAVPARLNRQGLSQVVNHLLNLPVPRPFDFLVDGQFLRTSLEKYLLQHGASEEALLTLEYVEALPEPEKQREANHPDWVSAVAAAHTGL--VVTGCYDGHVRVHDAAGECVAALKAHHGAVKAVSVQRVPEKK-----REFVIATSGKDQTGQLWLF--DAAKKRISALAAFTGHLNSVDAVALRVTG-----EQALTGSWDNTVRVWDTKAA-VSAAXXXXXXXXXXXXXXXXXASGASAVSFRQLEAEVVLVG---HTSFVTGVAFH----------PQHEHLVVSGASDRSVRVWDLTTHSCAQTLTGNRAITDISVNADGLVLS-AHPDHCVRLWDPRASQAGESLVQRTFSSHKEWVSAVEWHPTRATLFASASYDGSVKVWDARSSVPLHTLAAHDGKALDVAWRLEDAAHVAFASGGEDKQLKFFSV 433          
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: A0A1Y1IFE5_KLENI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFE5_KLENI)

HSP 1 Score: 253 bits (647), Expect = 3.840e-76
Identity = 160/449 (35.63%), Postives = 227/449 (50.56%), Query Frame = 0
Query:   15 KVRVKFVTKIPS-IRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGEGLETFVTGCYDGCLRVYGPGCKVVSLAKAHQSPVTALCAVPSSSTGGAGRAAG---FVSGSKDMTARLWRLAGSGSNASLEAAAVLRGHANSISTVYAVSGGGSGTARAYTGDWSGHVCVWDVACLGEGGAEADSGGVSATQETKRRKTDKGAAAAAAEVSEQTPLAGFRAHSQAVTGLAAPGSGSGGAGGGQTAVSTLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLG-SSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWITDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGW-QDGKIVSGGEDGAVKTYLV 457
            +V+V+FVTK+P   RVT    AVP  L RYGLSEV+N LL  +   PFD LV G  LR+SL S++    LS E  L +EY+PA+  P         DWVSA+ G     +  V+GCYDG  R++    + ++  + H   +T+   +P        RA+G    ++ SKD T R+W++ G+ S  S +   VLRGH+ +I +V A   G        +G W   + VW V+   E G  A           KR++ +   AA A E   +        HSQ V+ +              +   T++S S D +V+TWD +      T+   K +  L    + G +LATG  D  +RIWD+R    T +   L SHK WIT VKW       +LS   DG VK+WD+RS +PLH+ QAH  KALC  W Q+  IVSGG D  ++ + +
Sbjct:   10 QVQVRFVTKLPEEYRVTNASFAVPARLTRYGLSEVINSLLSTEKLRPFDFLVGGELLRTSLESLLVSKKLSAETTLTIEYIPAVGLPKPVSSHVHDDWVSAINGTSP--DVLVSGCYDGVARLWSSSGEALTSLQGHSDAITSTAVIP--------RASGSCDVITASKDRTLRVWQVKGTDSQPSGDLHQVLRGHSAAIQSVVASPSGN----EVASGSWDTTIKVWSVSRDAEDGGSAP----------KRQRVEDSGAAPAGEQEAREARVTLEGHSQCVSAVD------------WSRADTIHSASWDHSVRTWDVQAAVNTSTITGSKVILALSVGGEGGALLATGGADPAIRIWDSRDSSSTGSAIQLLSHKGWITAVKWHKTRTHQLLSTSHDGTVKMWDVRSKVPLHTVQAHTVKALCVDWFQEATIVSGGADNQLRFHAL 422          
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Match: A0A3F2RMV9_9STRA (Ribosome biogenesis protein WDR12 homolog n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMV9_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.580e-75
Identity = 177/458 (38.65%), Postives = 234/458 (51.09%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGEGLETFVTGCYDGCLRVYGPGCKVVSLAKAHQSPVTALCAVPSSSTGGAGRAAGFV--SGSKDMTARLWRLAGSGSNASLEAAAVLRGHANSISTVYAVSGGGSGTARAYTGDWSGHVCVWDVACLGEGGAEADSGGVSATQETKRRKTDKGAAAAAAEVSE-QTPLAGFRAHSQAVTGLAAPGSGSGGAGGGQTAVSTLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLGSSDSGRMLATGHPDARVRIWDTRTQ--GETLTRASLSSHKQWITDVKWAP--GSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGK-------IVSGGEDGAVKTYLV 457
            +VRVKFVT   SIRVTETP AVP  L R GLS+VVNHLL   D P PFD L+ G FLRS+L   +Q   +S EA+L ++Y+ AL +P +    D PDWVSAVA   +  E  VTGCYDG LRVY       +  KAHQ  + A+    S  +G       F+  S  KD  A+LW    S     L   A L GH NS+  V   + G     R  T  W   V VW      E G +  +         K +KT  GA AA+ +  E +  L G   H+  VTG+A     S      +     L S   DR V+ WD   Q C  +L   +AV+ L  + SG +L T HPD  VR+WD R Q  G+ + + +  SHK+W++ V W P   +E + +S G DG  K+WD RST+PLH+ +AH GK L   W++           +GG+D  +  + V
Sbjct:    7 QVRVKFVTNDASIRVTETPFAVPTRLSRRGLSQVVNHLLNTGDKPRPFDFLIDGLFLRSTLSKYLQTSEVSEEALLTLQYVEALPEPQKQNSNDHPDWVSAVASIDD--ELVVTGCYDGVLRVYDAQGDCKASVKAHQGAIKAVSVATSEKSGK------FIIASSGKDQLAQLWTF--SIKTEKLAPMAALTGHLNSVDAVQMHASG----KRVVTASWDNTVRVWKAPSSEEAGEQRSA--------KKHKKTASGAGAASFQQLEAEMVLVG---HTSFVTGVAFRPKES------EHDEDVLVSAGSDRTVRLWDLVTQSCSQSLVGNRAVSDLSVNASGLIL-TAHPDHCVRLWDPRAQQNGDNIVQCTFHSHKEWVSSVAWHPDISNEHLFVSGGYDGTAKVWDARSTIPLHTVKAHDGKLLALSWRNQTKENSSMAFATGGDDKQLNFFSV 432          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig956.20554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI35_ECTSI3.820e-27283.12Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A6H5KQ32_9PHAE2.430e-11886.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CE58_9STRA2.070e-10243.64Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A8K1CSP5_PYTOL1.530e-8539.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C6Q8_PYTIN3.930e-8338.95Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A1V9ZBE6_9STRA2.500e-7938.75Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A1V9ZYX7_9STRA6.030e-7737.56Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A5D6YFB0_9STRA1.220e-7638.34Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A1Y1IFE5_KLENI3.840e-7635.63Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A3F2RMV9_9STRA2.580e-7538.65Ribosome biogenesis protein WDR12 homolog n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 174..188
score: 36.64
coord: 316..330
score: 39.18
coord: 403..417
score: 34.95
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 98..138
e-value: 12.0
score: 10.2
coord: 332..370
e-value: 9.1E-6
score: 35.2
coord: 139..187
e-value: 0.018
score: 24.2
coord: 376..416
e-value: 5.7E-7
score: 39.2
coord: 419..456
e-value: 4.7
score: 12.8
coord: 279..329
e-value: 0.38
score: 19.6
coord: 196..239
e-value: 2.5
score: 14.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 148..186
e-value: 0.078
score: 13.9
coord: 334..370
e-value: 8.6E-5
score: 23.2
coord: 382..416
e-value: 7.0E-5
score: 23.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 345..379
score: 10.208
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 383..425
score: 13.516
IPR012972NLEPFAMPF08154NLEcoord: 16..77
e-value: 2.0E-18
score: 66.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 90..459
e-value: 1.7E-58
score: 200.0
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 16..455
NoneNo IPR availablePANTHERPTHR19855:SF11RIBOSOME BIOGENESIS PROTEIN WDR12coord: 16..455
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 316..330
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 403..417
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 357..371
IPR028599WD repeat WDR12/Ytm1HAMAPMF_03029WDR12coord: 10..459
score: 26.489
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 316..463
score: 21.436
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 121..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig956contigS-firma_M_contig956:6764..12143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig956.20554.1mRNA_S-firma_M_contig956.20554.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig956 5816..12175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig956.20554.1 ID=prot_S-firma_M_contig956.20554.1|Name=mRNA_S-firma_M_contig956.20554.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=464bp
MDFGEPSDDEADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVN
HLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQP
TEAEHADQPDWVSAVAGAGEGLETFVTGCYDGCLRVYGPGCKVVSLAKAH
QSPVTALCAVPSSSTGGAGRAAGFVSGSKDMTARLWRLAGSGSNASLEAA
AVLRGHANSISTVYAVSGGGSGTARAYTGDWSGHVCVWDVACLGEGGAEA
DSGGVSATQETKRRKTDKGAAAAAAEVSEQTPLAGFRAHSQAVTGLAAPG
SGSGGAGGGQTAVSTLYSGSLDRAVKTWDAERQDCVHTLNAPKAVTCLGS
SDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWITDVKWAPGSE
TMVLSCGQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGKIVSGGEDG
AVKTYLVPERHSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR028599WDR12/Ytm1
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR012972NLE
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep