prot_S-firma_M_contig956.20553.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig956.20553.1
Unique Name	prot_S-firma_M_contig956.20553.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	214

Homology

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BLAST of mRNA_S-firma_M_contig956.20553.1 vs. uniprot
Match: D7G7C4_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C4_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 4.590e-59
Identity = 145/219 (66.21%), Postives = 159/219 (72.60%), Query Frame = 0

Query:    1 MVVSRTGLDRAWAGAWVLLRRFLEYLLEITQEHERGRTGGGRAXXXXXXXXXXXXXXXXXX---GAAGWQQRQRQRWMPGRRVAAVAFLTLLASYRRYQVTHPEVTTEHVLGGASSLVFALAAFLVHAAADLTIDACGAVIPSLCGTREARLAAAYGRLQAGVTGGGG---VGSGGDXXXXXXXXXRRIGQEXXXXXXXXXXXDGVPGEGHELDQYFVL 213
            +VVS TGLDRAWAGAWVL+R+ L+ LLE++QE  RGR+G G  XXXXXXX  XXXXXXXXX   GAAG  Q+ ++RW PGRRVAA A LTLLASYRRYQVTHPEVTT+HVLG ASSLV ALAAFLV AAADLTIDACGAVIPSLCGTRE+RL AAY RLQ     GGG   VG GGD            G+E            G   EGHELDQYF+L
Sbjct:  567 LVVSWTGLDRAWAGAWVLIRKLLQKLLEMSQE--RGRSGNGXXXXXXXXXATXXXXXXXXXHYVGAAGSHQQWQRRWRPGRRVAAAASLTLLASYRRYQVTHPEVTTDHVLGAASSLVLALAAFLVRAAADLTIDACGAVIPSLCGTRESRLEAAYRRLQQQRGDGGGEEGVGGGGD-----------AGREGGVRPVAEKVG-GPAAEGHELDQYFIL 771

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig956.20553.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig956.20553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G7C4_ECTSI	4.590e-59	66.21	FYVE-type domain-containing protein n=2 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 96..106
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..76
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 77..95
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 107..127
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 128..213

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig956	contig	S-firma_M_contig956:3025..3943 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig956.20553.1	mRNA_S-firma_M_contig956.20553.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig956 1525..5866 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig956.20553.1 ID=prot_S-firma_M_contig956.20553.1|Name=mRNA_S-firma_M_contig956.20553.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=214bp
MVVSRTGLDRAWAGAWVLLRRFLEYLLEITQEHERGRTGGGRARRSGGGG
RVGNGHYHHHVGAAGWQQRQRQRWMPGRRVAAVAFLTLLASYRRYQVTHP
EVTTEHVLGGASSLVFALAAFLVHAAADLTIDACGAVIPSLCGTREARLA
AAYGRLQAGVTGGGGVGSGGDGGGDGAGGGRRIGQEGGPRVLGEEGADGV
PGEGHELDQYFVL*