prot_S-firma_M_contig955.20544.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig955.20544.1
Unique Nameprot_S-firma_M_contig955.20544.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length424
Homology
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: A0A6H5JRD1_9PHAE (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD1_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 7.010e-102
Identity = 265/388 (68.30%), Postives = 289/388 (74.48%), Query Frame = 0
Query:   48 GATGDDSDVFETPVKARKRSRTLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQKGPGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGA---SPSQPSSSPAGXXXXXXXXXXXXXXXXXXXXXSPAMSAPHPTESTSGGVVRAGXXXXAAKPTPA---------KTPKAAVSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAARSEGRSVVAGGMKAAKSDFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVDEEPVPAKM 423
            GATGDDSDVFETP+KARKR+RT SQ    XXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +P+ P    +G                     +   +   P     GG + A     A K   A         KTPKAAVSDYM Q+NRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTL +Q+YGK++IYYANQDALPNGAGDASA+KMR LDQEAK+LTSQLEI SKQEQQ+R+RVSSLS QPTD  LA+KL   AQ+LEQAEARN AA+ +GRSV AGGMKAAK  FNKFRALW+ RKRNAMDVVDMIADGMEKKPK VM+ LGVE DEEP+P KM
Sbjct:   45 GATGDDSDVFETPIKARKRARTPSQQPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPATPGGRDSGSSRKDPQASSCADASEEKDSKTIVSAGAPPLPKPVGGSIGANGGTAAGKKGTAGAGASGSAPKTPKAAVSDYMLQSNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLKLQEYGKARIYYANQDALPNGAGDASADKMRTLDQEAKTLTSQLEIVSKQEQQTRARVSSLSCQPTDDELAKKLANSAQELEQAEARNGAAKGQGRSVAAGGMKAAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVMEMLGVEPDEEPIPPKM 432          
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: D7G4U2_ECTSI (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U2_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 3.430e-101
Identity = 168/208 (80.77%), Postives = 185/208 (88.94%), Query Frame = 0
Query:  216 KTPKAAVSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAARSEGRSVVAGGMKAAKSDFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVDEEPVPAKM 423
            KTPKAAVSDYM Q+NRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTL +Q+YGK++IYYANQDALPNGAGDASA+KMR LDQEAK+LTSQLEI SKQEQQ+R+R SSLS QPTD  L +KL   AQ+LEQAEARN AA+ +GRSV AGGMK AK  FNKFRALW+ RKRNAMDVVDMIADGMEKKPK VM+ LGVE DE+P+P KM
Sbjct:  112 KTPKAAVSDYMLQSNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLKLQEYGKARIYYANQDALPNGAGDASADKMRTLDQEAKTLTSQLEIVSKQEQQTRARASSLSCQPTDDELTKKLANCAQELEQAEARNGAAKGQGRSVAAGGMKTAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVMEMLGVEPDEDPIPPKM 319          
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: A0A836CJ02_9STRA (Tat binding protein 1-interacting protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ02_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.670e-36
Identity = 94/210 (44.76%), Postives = 127/210 (60.48%), Query Frame = 0
Query:  216 KTPKAAVSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAAR-SEGRSVVAGGMKAAKSDFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVDEEPV-PAKM 423
            KTP+ AV DYM+QTNRPYS +N+FDNL +KIP+ MVQK+LD+LV+ G L  ++YGK+ IYY NQ  L    G+  A     L  E K L++Q            S  ++L++QP D  L E+L  L    +  + R A  R ++G       M  A++ FNK R +W+DRK  A + VD I+DGMEKKPK VMD +GV+ D + V P KM
Sbjct:  151 KTPEQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQA-----LAAEEKDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTVVPPKM 355          
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: A0A225V1S8_9STRA (Pairing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V1S8_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.220e-32
Identity = 94/211 (44.55%), Postives = 131/211 (62.09%), Query Frame = 0
Query:  209 AAKPTPAKTPKAAVSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQS-RSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAARSEGRSVVAGGMKAA-KSDFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVDEE 417
            A KP  A   +AAV DYM++TNRPYS +NVF+N+ + I K  +  LLD L     L  + YGK+KIYY NQ  LP     + AE++  L+++ K +T+   +AS+QE +S  + ++S+ SQ +DA L   L +L ++    E +       GR+ V+ G K A K  F K+R  W+ RKR AMD V+ IADGMEKKPKAV+D +GVE DEE
Sbjct:    9 AVKPMKAADAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTTLLDNLTAKEELVSKTYGKAKIYYMNQSNLPV---PSEAERLA-LEEQIKVVTADC-VASEQELKSAEATLASIKSQLSDADLDAALKQLDEEAATLEKKMETLDQPGRAPVSPGRKEALKRKFTKYRTAWVSRKRIAMDGVNQIADGMEKKPKAVLDLVGVETDEE 214          
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: D0NIU5_PHYIT (Pairing protein 2 family protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NIU5_PHYIT)

HSP 1 Score: 131 bits (329), Expect = 2.940e-31
Identity = 85/200 (42.50%), Postives = 126/200 (63.00%), Query Frame = 0
Query:  219 KAAVSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAARSEGRSVVAGGMK-AAKSDFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVDEE 417
            +AAV DYM++TNRPYS +NVF+N+ + I K  + K LD LV    L+ + YGK+KIYY NQ+ LP      S E+   ++++ K++T++   + ++ + + + +S +SSQ +DA     L++L  +    E +       GR+ V+ G K A K  F K+R  W+ RKR AMD V+ IADGMEKKPKAV+D +GVE DEE
Sbjct:  109 EAAVLDYMRKTNRPYSLLNVFENMHRVIAKPSLTKPLDNLVVKEELASKTYGKAKIYYLNQNNLPV----PSEEERLAIEEQIKTVTAECTASEQELKSAETTLSGISSQISDADFDAALNQLEDEAAALETKVETLDQPGRAPVSPGRKNALKRKFTKYRTAWVQRKRIAMDGVNQIADGMEKKPKAVLDLVGVETDEE 304          
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: A0A6A3DU84_9STRA (TBPIP domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DU84_9STRA)

HSP 1 Score: 130 bits (328), Expect = 6.080e-31
Identity = 87/206 (42.23%), Postives = 126/206 (61.17%), Query Frame = 0
Query:  211 KPTPAKTPKAAVSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAARSEGRSVVAGGMK-AAKSDFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVD 415
            KP  A   +AAV DYM++TNRPYS +NVF+N+ + I K  + KLLD LV    L  + YGK+KIYY NQ  LP      S E+   L+++ K +T+    + ++ + + + ++ ++SQ +DA L   L +L ++  + E +       GR+ V+ G K A K  F K+R  W+ RKR AMD V+ IADGMEKKPKAV+D +GVE D
Sbjct:  120 KPMKADEAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQSNLPV----PSEEERLALEEQIKVVTADCAASEQELKSAEATLAGITSQISDADLDAALKQLDEEAAELEKKVETLDQPGRAPVSPGRKNALKRKFTKYRTAWVARKRIAMDGVNQIADGMEKKPKAVIDLVGVETD 321          
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: A0A329RFD1_9STRA (TBPIP domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RFD1_9STRA)

HSP 1 Score: 130 bits (326), Expect = 9.110e-31
Identity = 86/204 (42.16%), Postives = 127/204 (62.25%), Query Frame = 0
Query:  215 AKTPKAAVSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAARSEGRSVVAGGMK-AAKSDFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVDEE 417
            A+  +AAV DYM++TNRPYS +NVF+N+ + I K  + KLLD LV    L  + YGK+KIYY NQ+ LP      S E+   ++++ K++TS+   + ++ + + + +S ++SQ +DA L   L +L ++    E +       GR  V+ G K A K  F K+R  W+ RKR AMD V+ IADGMEKK KAV+D +G+E DEE
Sbjct:  112 AEDAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQNNLPV----PSEEERLAIEEQIKTVTSECTASEQELKSAEATLSGITSQISDADLDAALKQLEEEAATLETKVETLDQPGRVPVSPGRKDALKRKFTKYRTAWVARKRIAMDGVNQIADGMEKKTKAVLDLVGMETDEE 311          
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: A0A024U6Z6_9STRA (Homologous-pairing protein 2 homolog n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6Z6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.620e-28
Identity = 84/203 (41.38%), Postives = 123/203 (60.59%), Query Frame = 0
Query:  222 VSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAARSEGRS-------VVAGGMKAAKS-DFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVDE 416
            V+ YM+QTNRPYS +NVF+NL ++I K M+QK+LD LV  G ++V+ YGKS+IYY NQ  LP  + +A A     ++ +  + + ++    K+ +   + +  L+SQ +DA L+  L+ L       EA+NA  +++ +        VV  G KAA +  F K+R  W+ RKR  MD +D IADGMEKK K V+D  GVE DE
Sbjct:  122 VAKYMRQTNRPYSVLNVFENLHRRIGKTMLQKILDVLVEKGEINVKTYGKSQIYYYNQAKLPRPSPEALAH----IEDQITAASDEVASLEKELKDHEAILHGLNSQLSDAELSVTLESL-------EAQNATLQAKLQEMDKRPSVVVDPGAKAALTKSFTKYRTEWVKRKRIVMDAIDQIADGMEKKRKDVLDLCGVETDE 313          
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: A0A6G0XWT6_9STRA (Homologous-pairing protein 2 homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWT6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.020e-27
Identity = 80/196 (40.82%), Postives = 115/196 (58.67%), Query Frame = 0
Query:  222 VSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAARSEGRSVVAGGMKA-AKSDFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVDE 416
            V+ Y++QTNRPYS +NVF+NL ++I K M+QK+LD LV  G ++V+ YGKS+IYY NQ  LP      SAE + + +   +++  ++    K  ++  + ++ L+SQ +DA L   L  L  +     A+   A     + V  G KA     F K+R  W+ RKR  MD VD IA+GMEKK K VM+  GVE DE
Sbjct:  112 VAKYLRQTNRPYSVLNVFENLHRRIGKTMLQKILDVLVEQGEINVKTYGKSQIYYYNQRKLPA----PSAELLAKTEDSIQTVFEEVSALEKTLKEKEAVLNGLTSQMSDAELTAALADLENEASSLSAKLQQANERNTAPVDPGAKAHLTKSFQKYRTEWLKRKRIVMDAVDQIAEGMEKKRKDVMELCGVESDE 303          
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Match: A0A421FAN5_9STRA (TBPIP domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FAN5_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.180e-27
Identity = 84/209 (40.19%), Postives = 120/209 (57.42%), Query Frame = 0
Query:  210 AKPTPAKTPKAAVSDYMQQTNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQEAKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEARNAAARSEGRSVVAGGMK-AAKSDFNKFRALWMDRKRNAMDVVDMIADGMEKKPKAVMDDLGVEVDEE 417
            AKP  A   + AV DYM++TNRPYS +NVF+NL + I K  + KLLD LV    L  + YGK+KIYY NQ+ LP      S E+   L+++ K+ T       ++ + + + ++ ++SQ +DA L   + +L ++    E +  A     R+ V+ G K A K  F  +R  W+ RKR  MD V+ IADGMEKK K VMD  G+E D E
Sbjct:  106 AKPMSASEAEVAVLDYMRKTNRPYSLLNVFENLHRAIAKPSLTKLLDNLVTKEELVSKTYGKAKIYYMNQNKLPV----PSEEERVALEEQIKTTTGDCGALEQELKSTEATLAGITSQISDADLDLAIKQLDEEASTLEKKIEALDRPDRAPVSPGRKDALKRKFTTYRTAWVARKRIVMDGVNQIADGMEKKTKVVMDLCGIETDAE 310          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig955.20544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRD1_9PHAE7.010e-10268.30Homologous-pairing protein 2 homolog n=1 Tax=Ectoc... [more]
D7G4U2_ECTSI3.430e-10180.77Homologous-pairing protein 2 homolog n=1 Tax=Ectoc... [more]
A0A836CJ02_9STRA2.670e-3644.76Tat binding protein 1-interacting protein-domain-c... [more]
A0A225V1S8_9STRA1.220e-3244.55Pairing protein (Fragment) n=1 Tax=Phytophthora me... [more]
D0NIU5_PHYIT2.940e-3142.50Pairing protein 2 family protein n=2 Tax=Phytophth... [more]
A0A6A3DU84_9STRA6.080e-3142.23TBPIP domain-containing protein n=3 Tax=Phytophtho... [more]
A0A329RFD1_9STRA9.110e-3142.16TBPIP domain-containing protein n=2 Tax=Phytophtho... [more]
A0A024U6Z6_9STRA6.620e-2841.38Homologous-pairing protein 2 homolog n=1 Tax=Aphan... [more]
A0A6G0XWT6_9STRA1.020e-2740.82Homologous-pairing protein 2 homolog n=1 Tax=Aphan... [more]
A0A421FAN5_9STRA4.180e-2740.19TBPIP domain-containing protein n=2 Tax=Phytophtho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 331..358
NoneNo IPR availableCOILSCoilCoilcoord: 294..314
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 210..286
e-value: 7.3E-23
score: 82.1
IPR010776Homologous-pairing protein 2, winged helix domainPFAMPF07106TBPIPcoord: 219..278
e-value: 2.2E-19
score: 69.1
IPR040461Homologous-pairing protein 2PANTHERPTHR15938TBP-1 INTERACTING PROTEINcoord: 214..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig955contigS-firma_M_contig955:2372..9096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig955.20544.1mRNA_S-firma_M_contig955.20544.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig955 1846..9324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig955.20544.1 ID=prot_S-firma_M_contig955.20544.1|Name=mRNA_S-firma_M_contig955.20544.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=424bp
MPGGEGSSEEFVEDDSGGGEEEEEDEGDSSASYESEEESEDDDDDDDGAT
GDDSDVFETPVKARKRSRTLSQQQPASSAAGKNKRKTAADATSAATNGGK
KQKGPGATGASASTKKKSEGEGGAAAAAGAKGKGKGKGKGAAATATAGDG
ASPSQPSSSPAGGGSQAAPGGAGGRGGGSGGKGSPAMSAPHPTESTSGGV
VRAGGGGGAAKPTPAKTPKAAVSDYMQQTNRPYSYINVFDNLRKKIPKAM
VQKLLDELVRDGTLSVQDYGKSKIYYANQDALPNGAGDASAEKMRRLDQE
AKSLTSQLEIASKQEQQSRSRVSSLSSQPTDAVLAEKLDKLAQDLEQAEA
RNAAARSEGRSVVAGGMKAAKSDFNKFRALWMDRKRNAMDVVDMIADGME
KKPKAVMDDLGVEVDEEPVPAKM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040461Hop2
IPR010776Hop2_WH_dom
IPR036388WH-like_DNA-bd_sf