prot_S-firma_M_contig952.20513.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig952.20513.1
Unique Nameprot_S-firma_M_contig952.20513.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length290
Homology
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BLAST of mRNA_S-firma_M_contig952.20513.1 vs. uniprot
Match: D7G6L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L4_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.460e-50
Identity = 123/203 (60.59%), Postives = 144/203 (70.94%), Query Frame = 0 
Query:    2 NSSDEARRALAAEIRANEVEPERLRADDAEKSLAELRQASHGWLSAGHALKLQAAEEARGRGYADGXXXXRAELQAARAELSGQLLRSRRE-------VAAARAETVELVAAAGAAGAAALSKSRGVWRAEGRAEGVAAAEAGQ--AAEGGGGLREAFSAYVVSAHEQKLAAVAAEREAAGEVARDLSQELASANEMLAALLK 195
            NS D+ARR LAAEIR NEV+P++LRAD AE+ L+ELRQA+HGWLSA HALKL+A  EAR  G+A+G           R +L G+L RS RE       V  AR E V+ +AA G AGAAAL KSR VWRAEGRA       AG+  A+E    +REAF+AYVVSAHEQ+LAAVA ERE AGE AR+LS+ELA ANEMLAAL K
Sbjct:   41 NSQDDARRELAAEIRENEVQPQKLRADAAERDLSELRQAAHGWLSAAHALKLEAVAEARESGFAEG-----------RGDLLGKLERSHRERLALSEEVLVARTEAVDAIAAMGEAGAAALVKSRDVWRAEGRAAAEQELLAGEDVASE----VREAFAAYVVSAHEQRLAAVARERERAGEAARELSRELARANEMLAALSK 228
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BLAST of mRNA_S-firma_M_contig952.20513.1 vs. uniprot
Match: A0A6H5K265_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K265_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 2.640e-50
Identity = 124/214 (57.94%), Postives = 147/214 (68.69%), Query Frame = 0 
Query:    3 SSDEARRALAAEIRANEVEPERLRADDAEKSLAELRQASHGWLSAGHALKLQAAEEARGRGYADGXXXXRAELQAARAELSGQLLRSRREVAAARAETVELVAAAGAAGAAALSKSRGVWRAEGRAEGVAAAEAGQ--AAEGGGGLREAFSAYVVSAHEQKLAAVAAEREAAGEVARDLSQELASANEMLAALLKERVSETEMRRDSALGEIAA 214
            S D+ARR LAAEIR NEV+P++LRAD AE+ L+ELRQA+HGWLSA HALKL+A  EAR  G+A+G      +L+ +  E     L  R EV  AR E V+ +AA G AGAAAL KSR VWRAEGRA       AG+  AAE    +REAF+ YVVSAHEQ+LAAVA ERE AGE AR+L      ANEML AL KER  ETE+R D  L ++AA
Sbjct:  188 SQDDARRELAAEIRENEVQPQKLRADAAERDLSELRQAAHGWLSAAHALKLEAVAEARENGFAEGRGDLLEQLERSHRER----LALREEVLVARTEAVDAIAAMGEAGAAALVKSRDVWRAEGRAAAEQELLAGEDVAAE----VREAFATYVVSAHEQRLAAVARERERAGEAARELXXXXXXANEMLTALSKERSIETEVRHDPTLNKVAA 393
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig952.20513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6L4_ECTSI1.460e-5060.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K265_9PHAE2.640e-5057.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..99
NoneNo IPR availableCOILSCoilCoilcoord: 176..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig952contigS-firma_M_contig952:23718..25229 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig952.20513.1mRNA_S-firma_M_contig952.20513.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig952 23718..25229 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig952.20513.1 ID=prot_S-firma_M_contig952.20513.1|Name=mRNA_S-firma_M_contig952.20513.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=290bp
NNSSDEARRALAAEIRANEVEPERLRADDAEKSLAELRQASHGWLSAGHA
LKLQAAEEARGRGYADGYAEGRAELQAARAELSGQLLRSRREVAAARAET
VELVAAAGAAGAAALSKSRGVWRAEGRAEGVAAAEAGQAAEGGGGLREAF
SAYVVSAHEQKLAAVAAEREAAGEVARDLSQELASANEMLAALLKERVSE
TEMRRDSALGEIAAAASAAAAAAAGDAPADTTLPLDSDSDVPGVAPWPRG
AGAAVAAAAGVAAAAGAASEAVKLATSSPFWQECGGGGH*
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