prot_S-firma_M_contig9518.20508.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9518.20508.1
Unique Nameprot_S-firma_M_contig9518.20508.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length119
Homology
BLAST of mRNA_S-firma_M_contig9518.20508.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.360e-13
Identity = 73/126 (57.94%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    6 GQACCLASCGQCGGFGCSKAGKDT---DCCISDIVEDGEACSVKGSAPCYIGDGKPSGGD---------SXXXXXXXXXXXXXXXXXXXXXXXXDSGVCASAGGIPGIESSNGQACCLASCGQCGG 119
            G ACCLA CG CGG  C + G      +CC+SDIVE GE CS+  +APCYI D  P+             XXXXXXXXXXXXXXXXXXXXXXXX + VC++  GIPGI+S  G +CCLA CG+CGG
Sbjct: 1067 GNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGELCSIALAAPCYIDDSSPAPSPVAEPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSN--GIPGIQS--GVSCCLAECGECGG 1188          
BLAST of mRNA_S-firma_M_contig9518.20508.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 9.670e-9
Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    8 ACCLASCGQCGGFGCSKAGKDT---DCCISDIVEDGEACSVKGSAPCYIGD 55
            ACCLA CG CGG GC + G      +CC+SDIVE GE CS+   APCYI D
Sbjct: 1095 ACCLAECGACGGSGCDEFGGGLGADNCCVSDIVEYGELCSIALEAPCYIDD 1145          
BLAST of mRNA_S-firma_M_contig9518.20508.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.230e-8
Identity = 48/114 (42.11%), Postives = 57/114 (50.00%), Query Frame = 0
Query:    7 QACCLASCGQCGGFGCS-KAGKDTDCCISDIVEDGEACSVKGSAPCYIGDGKPSGGDSXXXXXXXXXXXXXXXXXXXXXXXXDSGVCASAGGIPGIESSNGQACCLASCGQCGG 119
            + CC ASCG CGG GCS + G    CC   +   G  CSV G APC  G   P+   S  X           XXXXXX    +  +C   GGI GI++   + CC ASCG CGG
Sbjct:  150 EVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCSVTGEAPCITGPA-PTPAPSPPXTVEGPAPTLEPXXXXXXPPAGEVPMCD--GGIVGIQAK--EVCCSASCGSCGG 258          
BLAST of mRNA_S-firma_M_contig9518.20508.1 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.830e-6
Identity = 52/120 (43.33%), Postives = 62/120 (51.67%), Query Frame = 0
Query:    1 IESSNGQACCLASCGQCGGFGCS-KAGKDTDCCISDIVEDGEACSVKGSAPCYIGDGKPSGGDSXXXXXXXXXXXXXXXXXXXXXXXXDSGVCASAGGIPGIESSNGQACCLASCGQCGG 119
            I+SS+   CC ASCG CGG GC+ + G    CC   +   G  CS+ G APC  G                     XXXXXXXXXX  +  +C   GGI GI+SS+   CC ASCG CGG
Sbjct:  246 IQSSD--VCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTG----------------PAPTPXXXXXXXXXXTVEVPMCD--GGIVGIQSSD--VCCSASCGSCGG 343          
BLAST of mRNA_S-firma_M_contig9518.20508.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.560e-5
Identity = 50/120 (41.67%), Postives = 60/120 (50.00%), Query Frame = 0
Query:    1 IESSNGQACCLASCGQCGGFGCSKA-GKDTDCCISDIVEDGEACSVKGSAPCYIGDGKPSGGDSXXXXXXXXXXXXXXXXXXXXXXXXDSGVCASAGGIPGIESSNGQACCLASCGQCGG 119
            I+SS+   CC ASCG CGG GC++  G    CC   +   G  CS+ G APC  G                      XXXXXXXXX  +  +C   G I GI+SS+   CC ASCG CGG
Sbjct:   71 IQSSD--VCCSASCGSCGGSGCTERDGGSESCCGGGVRASGRYCSITGEAPCMTG----------------PAPTPDXXXXXXXXXTVEVPMCD--GDIVGIQSSD--VCCSASCGSCGG 168          
BLAST of mRNA_S-firma_M_contig9518.20508.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 2.100e-5
Identity = 48/112 (42.86%), Postives = 55/112 (49.11%), Query Frame = 0
Query:    9 CCLASCGQCGGFGCS-KAGKDTDCCISDIVEDGEACSVKGSAPCYIGDGKPSGGDSXXXXXXXXXXXXXXXXXXXXXXXXDSGVCASAGGIPGIESSNGQACCLASCGQCGG 119
            CC ASCG CGG GCS + G    CC   +   G  CSV G APC  G                      XXXXXXXXX  +  +C   GGI GI++S+   CC  SCG CGG
Sbjct:  202 CCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTG----------------AAPTPEXXXXXXXXXTVEVPMCD--GGIVGIQTSD--VCCSTSCGSCGG 293          
BLAST of mRNA_S-firma_M_contig9518.20508.1 vs. uniprot
Match: A0A6H5K607_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K607_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 2.770e-5
Identity = 25/55 (45.45%), Postives = 31/55 (56.36%), Query Frame = 0
Query:    1 IESSNGQACCLASCGQCGGFGCS-KAGKDTDCCISDIVEDGEACSVKGSAPCYIG 54
            I+SS+   CC ASCG CGG GC+ + G    CC   +   G  CS+ G APC  G
Sbjct:    9 IQSSD--VCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTG 61          
BLAST of mRNA_S-firma_M_contig9518.20508.1 vs. uniprot
Match: A0A6H5K8Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Q7_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 4.470e-5
Identity = 25/55 (45.45%), Postives = 31/55 (56.36%), Query Frame = 0
Query:    1 IESSNGQACCLASCGQCGGFGCS-KAGKDTDCCISDIVEDGEACSVKGSAPCYIG 54
            I+SS+   CC ASCG CGG GC+ + G    CC   +   G  CS+ G APC  G
Sbjct:    9 IQSSD--VCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTG 61          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9518.20508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FJ68_ECTSI1.360e-1357.94WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JG29_9PHAE9.670e-958.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWJ0_9PHAE2.230e-842.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4E0_ECTSI1.830e-643.33N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5JTV1_9PHAE1.560e-541.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G3U7_ECTSI2.100e-542.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K607_9PHAE2.770e-545.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Q7_9PHAE4.470e-545.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9518contigS-firma_M_contig9518:2033..2852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9518.20508.1mRNA_S-firma_M_contig9518.20508.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9518 2033..2852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9518.20508.1 ID=prot_S-firma_M_contig9518.20508.1|Name=mRNA_S-firma_M_contig9518.20508.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=119bp
IESSNGQACCLASCGQCGGFGCSKAGKDTDCCISDIVEDGEACSVKGSAP
CYIGDGKPSGGDSGSESSSSDSSSDSPDKDSSESSSDDSGVCASAGGIPG
IESSNGQACCLASCGQCGG
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