prot_S-firma_M_contig9500.20491.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9500.20491.1
Unique Nameprot_S-firma_M_contig9500.20491.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length53
Homology
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BLAST of mRNA_S-firma_M_contig9500.20491.1 vs. uniprot
Match: D7G3C0_ECTSI (Sorting and Assembly Machinery 50kDa protein (N-terminal) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C0_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.880e-28
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0 
Query:    1 SASLGFPFPVPAMATAGWRGYLFTNVGNLTTWDTPLRQYGRDTRVSVGVAAAW 53
            SASLGFPFPVPAMATAGWRGYLFTN+GNLTTWDTPL+QYGRDTRVSVGVAAAW
Sbjct:  361 SASLGFPFPVPAMATAGWRGYLFTNLGNLTTWDTPLKQYGRDTRVSVGVAAAW 413
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9500.20491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3C0_ECTSI1.880e-2896.23Sorting and Assembly Machinery 50kDa protein (N-te... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9500contigS-firma_M_contig9500:1451..1609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9500.20491.1mRNA_S-firma_M_contig9500.20491.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9500 1451..1609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9500.20491.1 ID=prot_S-firma_M_contig9500.20491.1|Name=mRNA_S-firma_M_contig9500.20491.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=53bp
SASLGFPFPVPAMATAGWRGYLFTNVGNLTTWDTPLRQYGRDTRVSVGVA
AAW
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