prot_S-firma_M_contig9485.20468.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9485.20468.1
Unique Nameprot_S-firma_M_contig9485.20468.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length184
Homology
[Close]
BLAST of mRNA_S-firma_M_contig9485.20468.1 vs. uniprot
Match: A0A6H5JJU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU2_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 7.170e-34
Identity = 84/146 (57.53%), Postives = 92/146 (63.01%), Query Frame = 0 
Query:    1 MLADWILSAAPGFDGEEDGDHGLQALPPRMTADFGTDALEALEAAVTFAPTPLAAVREARAWREVVAPTHQVGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIGCCPSGELEAAFPSLARELLALLRQ 146
            MLADW+L+AAPGFD + DG++  QALP RMT DF  DALEALEAAVTFA +PLAAVREARAWREV+APT Q        XXXXXX                                  L+GCCPS ELEAAFPSLARELL LLRQ
Sbjct:    1 MLADWVLTAAPGFDSKGDGEYAFQALPSRMTEDFAVDALEALEAAVTFARSPLAAVREARAWREVIAPTQQQTGGNSSNXXXXXXRSRSGGEKQQQPSVPELSGLTHASHLL------SLVGCCPSVELEAAFPSLARELLRLLRQ 140
[Close]
BLAST of mRNA_S-firma_M_contig9485.20468.1 vs. uniprot
Match: D8LP19_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP19_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 2.330e-26
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 0 
Query:    1 MLADWILSAAPGFDGEEDGDHGLQALPPRMTADFGTDALEALEAAVTFAPTPLAAVREARAWREVVAPT 69
            MLADW+L+AAPGFD + DGD+  QALPPRMT DF  DALEALEAAVTFA +PLAAVREARAWREV+APT
Sbjct:    1 MLADWVLTAAPGFDSQGDGDNAFQALPPRMTEDFAVDALEALEAAVTFARSPLAAVREARAWREVIAPT 69
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9485.20468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJU2_9PHAE7.170e-3457.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP19_ECTSI2.330e-2679.71Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9485contigS-firma_M_contig9485:1415..2636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9485.20468.1mRNA_S-firma_M_contig9485.20468.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9485 1407..2636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9485.20468.1 ID=prot_S-firma_M_contig9485.20468.1|Name=mRNA_S-firma_M_contig9485.20468.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=184bp
MLADWILSAAPGFDGEEDGDHGLQALPPRMTADFGTDALEALEAAVTFAP
TPLAAVREARAWREVVAPTHQVGSSGSNGANNTNNSRGGGKGGGDKQQKQ
QPRSVPQLPRLTHASHLLGLIGCCPSGELEAAFPSLARELLALLRQQQRP
HRGGGGGGDARPAGGSGDGGDDDDCTARAVALAA
back to top