prot_S-firma_M_contig9445.20429.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9445.20429.1
Unique Nameprot_S-firma_M_contig9445.20429.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length347
Homology
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 8.250e-34
Identity = 115/308 (37.34%), Postives = 142/308 (46.10%), Query Frame = 0
Query:   36 TAEEERLAAE--ARRPPSVVIDRETRRQLLDYFVLSPPEKDMKGGKTSSINAISSSFGSTRRGSGTQQEQGDAIGSSGRGARFSKSVR------------------GVFSRLPTLNNATPDPPPLPGATSPPSVLASPLPTSPDIEEAGG-------VNVQEPRSAGNCEEG---GLAAVAADGSTTADK--------------SGGDDLGEADDSIVDVRESAER--DFESDAPTKNATGGSRQECDEVDGEGSAAESCIICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDVIA 297
            TAEE RL AE   RR P  V+D+ETRR++L+YF                              S T Q +GD IG SGRG RF K  R                  GVFS  P    A+  PP  PGA    S+ +             G        +V + R+A + EEG     AA+A+D     D               + G   G   D +V    + E+  D     P  +A GG + E  E  GEGS   SCI+CFGDY +GEELCRL C H+YHAKCIDEW DGENHGWCPLCKTD+++
Sbjct:    4 TAEEARLEAEEAGRRRPPGVLDKETRRRVLNYFXXXXXXXXXXXXXXXXXXXX------XXXPSNTAQREGD-IGGSGRGIRFPKLARVGGNASGISGAGSGRLFAGVFS--PYRAPASGSPPRPPGAAXXXSLRSPXXXXXXXXXRRAGRDAYSTAEHVDQERAAADREEGLAAAAAALASDAEPATDSCTNRPAGGEIRDAAAAGPAAGSETDVVVAEASAGEKAGDEGPSCPRTDAKGGVQGE--EAKGEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMS 300          
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 7.150e-28
Identity = 112/311 (36.01%), Postives = 132/311 (42.44%), Query Frame = 0
Query:   36 TAEEERLAAE--ARRPPSVVIDRETRRQLLDYFVLSPPEKDMKGGKTSSINAISSSFGSTRRGSGTQQEQGDAIGSSGRGARFSKSVRGVFSRLPTLNNATPDPPPLPGATSPPSVLASPLPTSPDI--------------------EEAG------GVNVQEPRSAGNCEEG---GLAAVAADGSTTADKSGGDDLGEADDSIVDVRESAERDFESD-----------APTKNATGGSRQECD-------EVDGEGSAAESCIICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDVIA 297
            T EE  L AE   RR P  V+D+ETRR++L+YF                    S S  S      T Q +GD  GS GRG RF K  RG      T    +       G  SP    AS  P  P                        AG        ++ + R+A N EEG     A +A+D     D   G D     +      E A    E+D           AP     G S    D       E  GEGS   SCI+CFGDY +GEELCRL C H+YHAKCIDEW DGENHGWCPLCKTD+I+
Sbjct:    7 TPEEATLEAEEAGRRRPPGVLDKETRRRVLNYFXXXXXXXXXXXXXXXXXXXXSRSNPSN-----TAQREGDICGS-GRGVRFPKLARGGSIASGTSGAGSGRL--FVGVLSPCRAPASGSPPRPXXXXXXXXXXXXXXXXXXXXXXRRAGRDAFNTAEHIDQERAAANREEGLPAAAAVLASDAEPETDS--GTDRPAGGEIRAAAAEGAAARNETDVVVVGTSVGEEAPGAGDEGSSYPRTDAGGVLGEEAKGEGSTRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIIS 307          
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 5.240e-20
Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 0
Query:  244 SAAESCIICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDVI 296
            S +ESCIICFG+YA G+ LCRLPCRH YHA+CID W D   H WCPLCK+ ++
Sbjct:   73 SCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLL 125          
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 7.020e-19
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0
Query:  244 SAAESCIICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDVI 296
            S+ ESCIICFG+YA G+ LCRLPCRH YHA+CID W DG  H WCPLCK+ ++
Sbjct:  453 SSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLL 505          
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 6.100e-16
Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:  236 CDEVDGEGSAAESCIICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDV 295
            CD   GE S  ++CI+CFGDY  G+ L RLPCRHVYHA+CIDEW D      CPLCKTD+
Sbjct:  248 CDS--GEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDL 305          
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.380e-15
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  241 GEGSAAESCIICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDV 295
            GE S  ++CI+CF DY  G+ L RLPCRHVYHA+CIDEW D      CPLCKTD+
Sbjct:  151 GEWSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDL 205          
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.310e-14
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  241 GEGSAAESCIICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDV 295
            GE S  ++CI+CFGDY  G+ L  LPCRHVYHA+CIDEW D      CPLCKTD+
Sbjct:  344 GEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDL 398          
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: A0A0E0LQD2_ORYPU (RING-type domain-containing protein n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0LQD2_ORYPU)

HSP 1 Score: 68.2 bits (165), Expect = 1.690e-9
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:  238 EVDGEGSAAESCIICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDVIA 297
            EV  + S + SC IC  DY+FGE+L  LPCRH +HA C+D W       +CP+CK D  A
Sbjct:   57 EVQEDNSTSSSCAICLEDYSFGEKLRVLPCRHKFHATCVDMWLTSWKT-FCPVCKRDASA 115          
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: A0A7S0QVM1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QVM1_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 1.880e-9
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0
Query:  246 AESCIICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDVIAA 298
            AE C IC  D+A G++L RLPCRH +H  CIDEW        CP+CK D+  A
Sbjct:   67 AELCTICLDDFAKGDQLRRLPCRHHFHVTCIDEWLG--RRSMCPVCKHDLSRA 117          
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Match: A0A7S4DFB0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFB0_HETAK)

HSP 1 Score: 66.2 bits (160), Expect = 2.420e-9
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:  247 ESCIICFGDYAFGEELCRL-PCRHVYHAKCIDEWFDGENHGWCPLCKTDV 295
            + C IC GDY  GE LC L PCRHV+HA CIDEW   ++H  CP CK ++
Sbjct:   86 KDCPICLGDYQTGERLCALAPCRHVFHAGCIDEWL--KSHQECPNCKVNL 133          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9445.20429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSX3_ECTSI8.250e-3437.34RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE7.150e-2836.01RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUH7_9PHAE5.240e-2066.04RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LQW5_ECTSI7.020e-1967.92RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI6.100e-1661.67RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE1.380e-1561.82RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI1.310e-1461.82RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0E0LQD2_ORYPU1.690e-948.33RING-type domain-containing protein n=1 Tax=Oryza ... [more]
A0A7S0QVM1_9CHLO1.880e-950.94Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S4DFB0_HETAK2.420e-956.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 249..291
e-value: 6.8E-6
score: 35.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 248..292
e-value: 3.1E-10
score: 40.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 249..292
score: 11.427
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 210..297
e-value: 2.5E-16
score: 61.1
NoneNo IPR availablePANTHERPTHR45969FAMILY NOT NAMEDcoord: 216..312
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..346
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 248..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9445contigS-firma_M_contig9445:892..3386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9445.20429.1mRNA_S-firma_M_contig9445.20429.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9445 2..3901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9445.20429.1 ID=prot_S-firma_M_contig9445.20429.1|Name=mRNA_S-firma_M_contig9445.20429.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=347bp
MNAKPLRPTAVLVFLVSASYCGVLVRQQRIAAAEFTAEEERLAAEARRPP
SVVIDRETRRQLLDYFVLSPPEKDMKGGKTSSINAISSSFGSTRRGSGTQ
QEQGDAIGSSGRGARFSKSVRGVFSRLPTLNNATPDPPPLPGATSPPSVL
ASPLPTSPDIEEAGGVNVQEPRSAGNCEEGGLAAVAADGSTTADKSGGDD
LGEADDSIVDVRESAERDFESDAPTKNATGGSRQECDEVDGEGSAAESCI
ICFGDYAFGEELCRLPCRHVYHAKCIDEWFDGENHGWCPLCKTDVIAAAA
SAGSATGNNQNSSSSASTTRQENRGLRRQRNYEDSFYYNNDVWQGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING