prot_S-firma_M_contig9419.20402.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9419.20402.1
Unique Nameprot_S-firma_M_contig9419.20402.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length629
Homology
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 3.060e-25
Identity = 73/155 (47.10%), Postives = 86/155 (55.48%), Query Frame = 0
Query:  475 DGGGVGSAASDTLLNPDSVLFINXXXXXXXXXXXXXXXXMAMLGGLSVFIGDVDVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLKEAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVFQGNTAG 629
            DGG +GS ++D++ N  S L +N                +A+LGGL+V IG  +V FI N A VA                             AVSTVGSGNLKE A + P NPTTFD C F+DNRA ATGGAI+SAAGQDAFV S FQGN AG
Sbjct:  536 DGGVIGSFSTDSVSNQGSTLVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAG 690          
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 9.140e-17
Identity = 79/157 (50.32%), Postives = 93/157 (59.24%), Query Frame = 0
Query:  474 ADGGGVGSAASDTLLNPD-SVLFINXXXXXXXXXXXXXXXXMAMLGGLSVFIGDVDVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLKEAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVFQGNTAG 629
            ADGG VGS   D+L NP  S L + XXXXXXXXXXXXXXX +A+LGGLSV IG  +  F+ NTAAVA                             A+S +GSG         P  PTTF++C F  NRA ATGGA+++AAGQD FV SVF+GNTAG
Sbjct:  255 ADGGVVGSFVLDSLYNPQGSYLIVXXXXXXXXXXXXXXXXALALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPA-PTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAG 410          
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.680e-16
Identity = 79/146 (54.11%), Postives = 90/146 (61.64%), Query Frame = 0
Query:  479 VGSAASDTLLNPDSVLFINXXXXXXXXXXXXXXXXMAMLGG-LSVFIGDVDVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLKEAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVF 623
            VGS+  D   N +S L INXXXXXXXXXXXXXXXX+A+LGG L V  G   V F +NTAAVA                             AVSTVGSGNLKE A + P NPT F RC FV+N+AAATGGA+E+AAGQD FV  +F
Sbjct: 1348 VGSSVMDPEFNRESNLTINXXXXXXXXXXXXXXXXLALLGGGLHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGNLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFVDCLF 1493          
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 9.200e-15
Identity = 59/157 (37.58%), Postives = 73/157 (46.50%), Query Frame = 0
Query:  475 DGGGVGSAASDTLLN-PDSVLFINXXXXXXXXXXXXXXXXMAMLGGLSVFIGDV-DVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLKEAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVFQGNTAG 629
            DGG + S   D  LN  +S + IN                + +LG   + +     VRF +N AAVA                             AV+  GSGN K  A + P NPTTF+RCWFV NRA ATGGAI+SAAG D FV + F+ N AG
Sbjct:  888 DGGAIVSPEFDDELNLENSAILINGTTSFFNNACGGNGGAVTLLGACDLVVNPAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAG 1044          
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 4.540e-14
Identity = 59/157 (37.58%), Postives = 76/157 (48.41%), Query Frame = 0
Query:  475 DGGGVGSAASDTLLNP-DSVLFINXXXXXXXXXXXXXXXXMAMLGGLSVFIG-DVDVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLKEAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVFQGNTAG 629
            DGG + S   D+  NP +S L  N                MA+ GG ++ I  ++ + FI+NTAAV+                             AV+T GSG  K    + P NPTTFDRC FV NRA ATGGAI++AAG D FV + F+ N AG
Sbjct:  697 DGGAIVSPQLDSEYNPSESTLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAG 853          
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 9.260e-14
Identity = 59/153 (38.56%), Postives = 79/153 (51.63%), Query Frame = 0
Query:  479 VGSAASDTLLNP-DSVLFINXXXXXXXXXXXXXXXXMAMLGGLSVFIGDVDVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLK--EAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVFQGNTA 628
            VGS ASD++L+P DS L I+                +A+LGGLS+ +   +  F+DN+A +A                             AVS +GSGN+K  E   +LP   TTF RC F  NRA ATGGA++SA+GQD F  +VF+GN A
Sbjct: 2216 VGSVASDSVLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTEETNFVDNSADLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSALGSGNVKGGENDQLLP---TTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQA 2365          
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 9.360e-14
Identity = 59/153 (38.56%), Postives = 80/153 (52.29%), Query Frame = 0
Query:  479 VGSAASDTLLNP-DSVLFINXXXXXXXXXXXXXXXXMAMLGGLSVFIGDVDVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLK--EAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVFQGNTA 628
            VGS ASD++L+P DS L I+                +A+LGGLS+ +   +  F+DN+A +A                             AVS++GSGN+K  E   +LP   TTF RC F  NRA ATGGA++SA+GQD F  +VF+GN A
Sbjct:  303 VGSVASDSVLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLP---TTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQA 452          
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.330e-13
Identity = 77/152 (50.66%), Postives = 85/152 (55.92%), Query Frame = 0
Query:  479 VGSAASDTLLN-PDSVLFINXXXXXXXXXXXXXXXXMAMLGGLSVFIGDVDVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLKEAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVFQGNTAG 629
            V S   D++ N   S L IN                +A   GLSV I    V F  N A VA               XXXXXXXXXXXXXXAVS VGSGNLK    +   +PTTFDRC FV N+A+ATGGA ESAAGQDAFVG+VF GN AG
Sbjct:  509 VASPILDSVYNLRSSTLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGFFDLEWPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAG 660          
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.380e-10
Identity = 65/150 (43.33%), Postives = 84/150 (56.00%), Query Frame = 0
Query:  480 GSAASDTLLNPDSVLFINXXXXXXXXXXXXXXXXMAMLGGLSVFIGDVDVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLKEAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVFQGNTAG 629
            G+ A++ L   +S+LFIN                MA+   +++ IG VDV F+ N+A VA X              XXXXXXXXXXXXX +S  GSG  +         PTTFD C F+ N+A +TGGAI SAAG+DA   SVF+GN+AG
Sbjct:  799 GAVATNALSTSNSILFINGTTIFSDNSAGGNGGGMALFVDVALNIGTVDVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTDESGDL-----PTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAG 943          
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 5.520e-10
Identity = 45/104 (43.27%), Postives = 55/104 (52.88%), Query Frame = 0
Query:  526 DVDVRFIDNTAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSTVGSGNLKEAAAVLPQNPTTFDRCWFVDNRAAATGGAIESAAGQDAFVGSVFQGNTAG 629
            +VD+ F+ N+A VA                             AVS  G G           NPTTFDRC FVDN+ A+TGGAIESAAG+DAF GS+F+GN+AG
Sbjct:  954 NVDISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCGIEPSGG----DNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAG 1053          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9419.20402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G301_ECTSI3.060e-2547.10Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2Z8_ECTSI9.140e-1750.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI2.680e-1654.11Polymorphic Outer membrane protein G/I family n=1 ... [more]
D8LSC0_ECTSI9.200e-1537.58Polymorphic Outer membrane protein G/I family n=3 ... [more]
D8LIY0_ECTSI4.540e-1437.58Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHG7_ECTSI9.260e-1438.56LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FHH1_ECTSI9.360e-1438.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTL7_ECTSI1.330e-1350.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K0E9_9PHAE1.380e-1043.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTI5_ECTSI5.520e-1043.27Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 218..232
e-value: 0.028
score: 14.9
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 218..234
e-value: 0.0027
score: 15.5
coord: 159..179
e-value: 9.5E-4
score: 16.9
coord: 380..398
e-value: 0.0014
score: 16.4
coord: 66..86
e-value: 7.1E-4
score: 17.3
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 9..350
coord: 352..621
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 215..421

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9419contigS-firma_M_contig9419:654..2540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9419.20402.1mRNA_S-firma_M_contig9419.20402.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9419 654..3302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9419.20402.1 ID=prot_S-firma_M_contig9419.20402.1|Name=mRNA_S-firma_M_contig9419.20402.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=629bp
MFVTGGSVVSCGVSWLRNAAGDDGGAIVVTEGSSLSWEDEATFEFNSAGR
TGGAIRLLFNSTVSWNTPTSFSSNSAVLGGGALLATTHSGVSWSAPTTFT
NNTAIGDEGAIGGAVAVLFSSNLSWSGKTTYTNNFAQGSGGALAVNGPSK
ASWSASTDFMENTCGYSGGALYASDNAALSWSGEGTYTLFADNGGPFGGA
AMLVASSRLTCGEGTTSVFSGNSAGSDGGALYVDSGSSATFSGNTSMDGN
RALGVDGWGGAICVVNASASLGGVMSFNSNRAGLGGGLFATSALVSSVGT
TAYSNNSAAVGGGFFLRRSIAVWKGATTLSDNWAQESSGGGGAFSGSTAS
WEGQVEFSNNVAPITGGGGALVIESSDVSCSGSMKFSSNSAGSGGALYVF
LGSTMSWTGDTAFTNSSADTFGGGLLVADSVVSWSGDTEYTLNRATSGGA
IFVLNGSSVGWTGNTEFSSNVASADGGGVGSAASDTLLNPDSVLFINGDT
SFSNNTCGANGGGMAMLGGLSVFIGDVDVRFIDNTAAVAGGAVFVSGTGV
GPDFSDVRFVSNSAQVGGAVSTVGSGNLKEAAAVLPQNPTTFDRCWFVDN
RAAATGGAIESAAGQDAFVGSVFQGNTAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR003368POMP_repeat