prot_S-firma_M_contig9418.20400.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9418.20400.1
Unique Nameprot_S-firma_M_contig9418.20400.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length99
Homology
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BLAST of mRNA_S-firma_M_contig9418.20400.1 vs. uniprot
Match: A0A6H5KWG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG8_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 4.760e-20
Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 0 
Query:    1 MSNSELLTILQHRDLRMERQLSLPDHHPRSSS--QEYGQTDREDSESEDTGERSDRSVSIDVRRTDAAHFAVGSTSPDERGL-------KSTPRRQSFMFTQSRR 96
            +SN++ + ++Q R+LR++R LSLP+ HPRSSS  QEYG TD E  E +D GERSDRS SI+VRRTDA HFAV   +PD+          +  PRRQ F F   RR
Sbjct:   84 LSNADEMALVQQRELRIQRNLSLPERHPRSSSSSQEYGVTDHE--EDDDDGERSDRSDSIEVRRTDAHHFAVCGINPDQAARGGGECTPQGMPRRQGFKFGNGRR 186
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BLAST of mRNA_S-firma_M_contig9418.20400.1 vs. uniprot
Match: D7FVV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV3_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 5.950e-20
Identity = 56/105 (53.33%), Postives = 68/105 (64.76%), Query Frame = 0 
Query:    1 MSNSELLTILQHRDLRMERQLSLPDHHPRSSSQ--EYGQTDREDSESEDTGERSDRSVSIDVRRTDAAHFAVGSTSPDERGL-------KSTPRRQSFMFTQSRR 96
            +SN++ + ++Q R+LRM+R LSLP+ HPRSSS   EYG TD E  E ED GERSDRS SI+VRRTD  HFAV   SPD+          +  PRRQ F F   RR
Sbjct:   94 LSNADEMALVQQRELRMQRNLSLPERHPRSSSSSVEYGVTDHE--EDEDDGERSDRSDSIEVRRTDTHHFAVCGISPDQTTTGGGECTPQGMPRRQGFKFGHGRR 196
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9418.20400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWG8_9PHAE4.760e-2052.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVV3_ECTSI5.950e-2053.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9418contigS-firma_M_contig9418:416..1366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9418.20400.1mRNA_S-firma_M_contig9418.20400.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9418 75..2469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9418.20400.1 ID=prot_S-firma_M_contig9418.20400.1|Name=mRNA_S-firma_M_contig9418.20400.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=99bp
MSNSELLTILQHRDLRMERQLSLPDHHPRSSSQEYGQTDREDSESEDTGE
RSDRSVSIDVRRTDAAHFAVGSTSPDERGLKSTPRRQSFMFTQSRRRL*
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