prot_S-firma_M_contig9410.20395.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9410.20395.1
Unique Nameprot_S-firma_M_contig9410.20395.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length172
Homology
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: A0A6H5K7Z6_9PHAE (DUF4440 domain-containing protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Z6_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 7.830e-49
Identity = 92/181 (50.83%), Postives = 118/181 (65.19%), Query Frame = 0
Query:    2 MNVARTASRAGRVVV-----------AHASKNATMSTRSALPVRLAAAKLPMAHQLPISQVGARSFFGSGPSADEKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWIGADGPV-EVDARFTF 170
            M   RTASR  RVV            A  S NA +STRS L V  AA +L  A +LP+ Q+  ++ + +  ++D+KA+  AT NWRDT+TS + +APK+ AA+YA DALFWGTVSEQVR TP+HV +YF++FA  PKL+M   +P   R+HGD  I AG YTF W GADG + E  ARFTF
Sbjct:    7 MPAGRTASRLARVVSKSESSIQSSVRAGGSMNALLSTRSGLTVTQAATRL-TAVKLPVRQMSGQADYAANYTSDQKAVDAATRNWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEQVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTF 186          
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: A0A6H5K6U8_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U8_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 3.800e-40
Identity = 64/115 (55.65%), Postives = 85/115 (73.91%), Query Frame = 0
Query:   57 FGSGPSADEKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWIGADGPV-EVDARFTF 170
            + +  +AD+KA+  AT +WRDT+TS + +APK+ AA+YA DALFWGTVSE+VR TP+HV +YF++FA  PKL+M   +P   R+HGD  + AG YTF W GADG + E  ARFTF
Sbjct:    7 YAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAVHAGAYTFAWAGADGAMTETRARFTF 121          
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 3.710e-31
Identity = 62/132 (46.97%), Postives = 84/132 (63.64%), Query Frame = 0
Query:   56 FFGSGPSAD--------------EKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWIGADGP-VEVDARFTFHF 172
            FF  GP+AD              +KA+   T  W+DT+T G+ +APK+ AALYAPDA+ WGTVSE+VR TP+ + +YF++FA  PKL +    P  VR++G+  ++AG YTF W G DG  VE  ARF+F F
Sbjct:  271 FFKVGPNADLVKVTPKKVEITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTF 402          
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 6.680e-31
Identity = 58/110 (52.73%), Postives = 79/110 (71.82%), Query Frame = 0
Query:   64 DEKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWIGADGP-VEVDARFTFHF 172
            D+KA+ + T  W+DT+T G+ +APK+ AALYAPDA+ WGTVSE+VR TP+ + +YF++FA  PKL +    P  VR++G+  +QAG YTF W G DG  VE  ARF+F F
Sbjct:  322 DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTF 431          
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.300e-30
Identity = 58/113 (51.33%), Postives = 77/113 (68.14%), Query Frame = 0
Query:   61 PSADEKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWIGADGP-VEVDARFTFHF 172
            P  D +A+ + T  W+DT+TSG+ +APK+ AALYAPD   WGTVSE+VR TP+ +  YF+YFA  P+L +    P  VR++GD  +QAG YTF+W   DG  VE  ARF+F F
Sbjct:   24 PKLDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTF 136          
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 3.540e-29
Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = 0
Query:   64 DEKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWIGADGP-VEVDARFTFHF 172
            D +A+ + T  W+DT+TSG+ +APK+ AALYAPD   WGTVSE+VR TP+ +  YF+YFA  P+L +    P  VR++GD  +QAG YTF+W   DG  VE  ARF+F F
Sbjct:  172 DRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTF 281          
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 5.280e-29
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0
Query:   64 DEKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWIGADGP-VEVDARFTFHF 172
            D+KA+   T  W+DT+T G+ +APK+ AALYA DA+ WGTVSE+VR TP+ + +YF++FA  PKL +    P  VR++G   ++AG YTF W G DG  VE  ARF+F F
Sbjct:  287 DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTF 396          
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 2.160e-28
Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 0
Query:   62 SADEKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWIGADGP-VEVDARFTFHF 172
            +AD+ A+   T  W+DT+TSG+ +APK+ AALYA D + WGTVSE+VR TP+ +  YF+YFA  P+L +    P  VR++GD  +QAG YTF + GADG  VE  ARF+F F
Sbjct: 1256 AADKAAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTF 1367          
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 3.740e-28
Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = 0
Query:   64 DEKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWIGADGP-VEVDARFTFHF 172
            D+ A+   T  W+DT+TSG+ +APK+ AALYA D + WGTVSE+VR TP+ +  YF+YFA  P+L +    P  VR++GD  +QAG YTF + GADG  VE  ARF+F F
Sbjct:  133 DKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTF 242          
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Match: A0A836CEG0_9STRA (DUF4440 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 6.410e-22
Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 0
Query:   70 KATENWRDTLTSGSPNAPKEVAALYAPDALFWGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGDYTFTWI--GADGPVEVDARFTF 170
            + T+ W  T+TSG+ NA ++ A LYAPD + WGT+SE+VR TP  + +YF+YFA  P L ++   P  +R+ GD+ +  G YTFTW    + G     AR++F
Sbjct:    4 RTTDLWLRTVTSGTANAARDTAQLYAPDGVLWGTLSEEVRDTPAEIFDYFDYFANKPHLRVSGYRP-LIRVDGDVALNTGYYTFTWDDGSSGGTASKRARYSF 105          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9410.20395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7Z6_9PHAE7.830e-4950.83DUF4440 domain-containing protein n=7 Tax=Ectocarp... [more]
A0A6H5K6U8_9PHAE3.800e-4055.65DUF4440 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JT29_9PHAE3.710e-3146.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0Z5_9PHAE6.680e-3152.73PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JX02_9PHAE2.300e-3051.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF9_ECTSI3.540e-2951.82Similar to Uncharacterized protein conserved in ba... [more]
D7FUF8_ECTSI5.280e-2950.91Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5LB09_9PHAE2.160e-2851.79Reverse transcriptase domain-containing protein n=... [more]
D7FN21_ECTSI3.740e-2851.82Similar to Uncharacterized protein conserved in ba... [more]
A0A836CEG0_9STRA6.410e-2242.72DUF4440 domain-containing protein n=1 Tax=Tribonem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 59..172
e-value: 2.6E-24
score: 87.8
IPR027843Domain of unknown function DUF4440PFAMPF14534DUF4440coord: 68..170
e-value: 4.2E-13
score: 49.6
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 59..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9410contigS-firma_M_contig9410:621..3408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9410.20395.1mRNA_S-firma_M_contig9410.20395.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9410 621..3415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9410.20395.1 ID=prot_S-firma_M_contig9410.20395.1|Name=mRNA_S-firma_M_contig9410.20395.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=172bp
MMNVARTASRAGRVVVAHASKNATMSTRSALPVRLAAAKLPMAHQLPISQ
VGARSFFGSGPSADEKAIMKATENWRDTLTSGSPNAPKEVAALYAPDALF
WGTVSEQVRTTPKHVLEYFEYFAMSPKLTMTRLNPGTVRMHGDIGIQAGD
YTFTWIGADGPVEVDARFTFHF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf
IPR027843DUF4440