prot_S-firma_M_contig941.20393.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig941.20393.1
Unique Nameprot_S-firma_M_contig941.20393.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length570
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig941.20393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 549..569
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 9..85
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 9..85
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 9..101
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 4..132
e-value: 3.1E-21
score: 77.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig941contigS-firma_M_contig941:20180..25570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig941.20393.1mRNA_S-firma_M_contig941.20393.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig941 20180..25570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig941.20393.1 ID=prot_S-firma_M_contig941.20393.1|Name=mRNA_S-firma_M_contig941.20393.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=570bp
MPSHIFDAGLIPPELGELADLETLNLACNKLQGSLPPELGKLRVLVTLEM
QNNHIVGPIPPSFGNLDRLEYMNLNGNRIQSAFDERPGLPQVRTCFDLRN
VKVEIDGYAVEKWRAYLRGQQHPQQQQQRAAPISTGHAPMEQQQSQPQPL
PVAFAVDCVQGTGPIAAVCSSIGGDTSSGVAGDVWRSGGTLPASGIPAPT
ASGGVARGVSHAVPGYGGVAVSAGGVVRAESGQSGATEESLRRLAAQYPV
LRHLTSDNTNNGLVEIGQIVEEQMDVGPGVEVNRISVQEYVLRELNGLAQ
MAAGFHAVTVMVEPIAHGRRLEDPSSPPMESSSLSAYRATLTRGFCVALL
AGNVMDNRLVTKRGTADMETAGTVLDVVGLVAADDETGLKRLAERLRSGR
RRFVHTGRNLQMTDVAVNFVECRAMAERVARMVYDDSKKGERGVPREGDG
TLNLAPKSHDAGSPFGWFVDHVASWCESDSVGKSDTSSAKEGHRRAVVDL
KKMLLAVEQGHVGKAHGVNAKVDALVQTLHPPTRTAFLGSELQPSVSLAA
ELKASLDASIAEIHKLKSEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf